Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mustela_20putorius_20furo_20[refseq_20GCF_5F000215625.1_202011-06- 02] 7,783 sequences; 2,410,879,678 total letters Query= NC_021246.1 Length=281182 Score E Sequences producing significant alignments: (Bits) Value seq2 102 1e-16 seq32 84.2 4e-11 >seq2 Length=40953715 Score = 102 bits (112), Expect = 1e-16 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 193152 ACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGATAACGTTCTAGAATCGTCT 193211 || ||||| | || | ||| || ||| || ||||| || || || | ||| || Sbjct 19232389 ACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTACGTCCATCTTCC 19232448 Query 193212 AATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTATCTTGT 193271 | ||| || || ||||| || | |||||| ||||||||||| |||||||| || || || Sbjct 19232449 AGTTGCTTGCCAGCAAAGATCAGTCTCTGCTGATCAGGAGGAATTCCTTCCTTGTCCTGA 19232508 Query 193272 ATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATAGTTTTA 193331 || || | || | |||| || ||||| || | ||||| || ||||| || || || Sbjct 19232509 ATCTTTGCCTTCACATTTTCTATTGTATCCGAGGGTTCAACCTCGAGAGTAATGGTCTTC 19232568 Query 193332 CCTGTTAGCGTTTTTACAAATATTTGCAT 193360 || || || |||||||| || || ||||| Sbjct 19232569 CCCGTAAGGGTTTTTACGAAAATCTGCAT 19232597 >seq32 Length=14820502 Score = 84.2 bits (92), Expect = 4e-11 Identities = 111/154 (72%), Gaps = 0/154 (0%) Strand=Plus/Plus Query 193205 ATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTT 193264 ||| || ||| | || || ||||| || |||||| ||||||||||| |||||||| || Sbjct 8777061 ATCTTCCAATAGCTTGCCAGCAAAGATCGGTCTCTGCTGATCAGGAGGAATTCCTTCCTT 8777120 Query 193265 ATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTAT 193324 ||| || || |||| || | || | || ||||| | | ||||| | ||||| || Sbjct 8777121 ATCCTGAATCTTGGCCTTCACATCTTCTATTGTATCTAAGGGTTCAACCTTGAGAGTGAT 8777180 Query 193325 AGTTTTACCTGTTAGCGTTTTTACAAATATTTGC 193358 || || ||||| || ||||| || || || ||| Sbjct 8777181 GGTCTTCCCTGTAAGGGTTTTCACGAAAATCTGC 8777214 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 899566874872560