Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Mustela_20putorius_20furo_20[refseq_20GCF_5F000215625.1_202011-06-
02] 7,783 sequences; 2,410,879,678 total letters
Query= NC_021248.1
Length=307691
Score E
Sequences producing significant alignments: (Bits) Value
seq2 127 4e-24
seq32 93.3 8e-14
seq65 86.0 1e-11
>seq2
Length=40953715
Score = 127 bits (140), Expect = 4e-24
Identities = 167/229 (73%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 192309 ACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTC-TTTAGAGATATTATAATCAG 192367
|||||| | ||| | || || | ||| | ||| | ||| ||| || || || || ||||
Sbjct 19232370 ACCACCACGAAGTCTCAACACAAGATGAAGAGTGGACTCCTTTTGA-ATGTTGTAGTCAG 19232428
Query 192368 ATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTG 192427
| || || ||| |||| |||| ||| || ||||||||||| | |||||| |||||||| |
Sbjct 19232429 ACAAAGTACGTCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTCTGCTGATCAGGAG 19232488
Query 192428 GTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTA 192487
| |||||||| || || || || || || ||||| ||| | ||| || | ||| |
Sbjct 19232489 GAATTCCTTCCTTGTCCTGAATCTTTGCCTTCACATTTTCTATTGTATCCGAGGGTTCAA 19232548
Query 192488 CTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536
| || ||||||||||| || || || | ||||| | || ||||||||
Sbjct 19232549 CCTCGAGAGTAATGGTCTTCCCCGTAAGGGTTTTTACGAAAATCTGCAT 19232597
>seq32
Length=14820502
Score = 93.3 bits (102), Expect = 8e-14
Identities = 147/208 (71%), Gaps = 2/208 (1%)
Strand=Plus/Plus
Query 192328 ACTAAATGTAAAGTAGCCTC-TTTAGAGATATTATAATCAGATAATGTTCGTTCATCATC 192386
|| ||||| | || || ||| ||| ||| ||| ||| ||| | || || |||| ||
Sbjct 8777008 ACAAAATGAAGAGCAGACTCCTTTTGAGC-ATTGTAACCAGGCAGAGTATGTCCATCTTC 8777066
Query 192387 CAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGGTATTCCTTCTTTATCTTG 192446
|||| | || ||||||||||| |||||| |||||||| || |||||||| ||||| ||
Sbjct 8777067 CAATAGCTTGCCAGCAAAGATCGGTCTCTGCTGATCAGGAGGAATTCCTTCCTTATCCTG 8777126
Query 192447 TATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTACTTCTAGAGTAATGGTTTT 192506
|| || || |||| ||| | |||| | | ||| || | ||||| ||||| ||
Sbjct 8777127 AATCTTGGCCTTCACATCTTCTATTGTATCTAAGGGTTCAACCTTGAGAGTGATGGTCTT 8777186
Query 192507 ACCAGTTAATGTTTTAATAAATATCTGC 192534
|| || | ||||| | || ||||||
Sbjct 8777187 CCCTGTAAGGGTTTTCACGAAAATCTGC 8777214
>seq65
Length=10028950
Score = 86.0 bits (94), Expect = 1e-11
Identities = 157/230 (68%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366
|| ||||| || || || | || | ||| | || | |||||| ||| || ||||||
Sbjct 4318185 ATGCCACCCCTCAGGCGCAGGACCAGATGCAGGGTGGACTCTTTCTGGATGTTGTAATCA 4318126
Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426
|| | || || |||| || | || || ||||||||||| | ||||| || |||||
Sbjct 4318125 GAAAGAGTGCGGCCATCTTCGAGCTGCTTGCCAGCAAAGATAAGCCTCTGCTGGTCAGGG 4318066
Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486
|| || |||||||| ||||| || || | |||||||| || | || | ||
Sbjct 4318065 GGGATGCCTTCTTTGTCTTGGATCTTGTCCTTTACATTTTCAATGGTGTCACTGGGCTCC 4318006
Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536
|| || ||||| ||||| || || || | || || | || ||||||||
Sbjct 4318005 ACCTCCAGAGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 4317956
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 984381827962050
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |