Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Mustela_20putorius_20furo_20[refseq_20GCF_5F000215625.1_202011-06-
02] 7,783 sequences; 2,410,879,678 total letters
Query= NC_021249.1
Length=282895
Score E
Sequences producing significant alignments: (Bits) Value
seq2 125 1e-23
seq140 91.5 3e-13
>seq2
Length=40953715
Score = 125 bits (138), Expect = 1e-23
Identities = 170/237 (72%), Gaps = 0/237 (0%)
Strand=Plus/Plus
Query 171833 TTTCATAATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATT 171892
|||| || |||||| | ||||| || || | ||| | ||| | ||| || ||| ||
Sbjct 19232361 TTTCTTAGCACCACCACGAAGTCTCAACACAAGATGAAGAGTGGACTCCTTTTGAATGTT 19232420
Query 171893 ATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTG 171952
|| || || |||| ||| | || |||| ||| || |||||||| || | |||||| ||
Sbjct 19232421 GTAGTCAGACAAAGTACGTCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTCTGCTG 19232480
Query 171953 GTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGA 172012
||||| || |||||||| || || || || || || ||||| ||| ||||| ||
Sbjct 19232481 ATCAGGAGGAATTCCTTCCTTGTCCTGAATCTTTGCCTTCACATTTTCTATTGTATCCGA 19232540
Query 172013 CGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069
| ||| || || ||||||||||| || || || | ||||| | ||| ||||||||
Sbjct 19232541 GGGTTCAACCTCGAGAGTAATGGTCTTCCCCGTAAGGGTTTTTACGAAAATCTGCAT 19232597
>seq140
Length=6017924
Score = 91.5 bits (100), Expect = 3e-13
Identities = 176/255 (69%), Gaps = 11/255 (4%)
Strand=Plus/Plus
Query 171821 TATACTTTTTAGTTTCATAATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTC 171880
||| |||| | |||| ||| |||||| | ||||| || || | ||| | ||| | ||
Sbjct 3756365 TATTCTTTCT--TTTCTTAACACCACC-CAAAGTCTCAACACAAGATGAAGAGTGGACT- 3756420
Query 171881 TTTAGAAATATTATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAAT 171940
||||| |||| | || | |||| | | | || ||| ||| || |||||| |
Sbjct 3756421 -TTAGA--TATTGCAGTCATACAAAGTACATGCATCTTCCCCTTGCTT----GCAAAACT 3756473
Query 171941 TAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGT 172000
| |||||| | ||| | || || ||||| ||| | || | || |||||||||| |
Sbjct 3756474 CAGTCTCTGCTTATCAAGAGGAATACCTTCCTTACCCTGGCTCTTGGTTTTTACATTTTT 3756533
Query 172001 TATAGTATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAA 172060
||||||||||| | ||| || || ||||||||| | || || ||| ||||| | ||
Sbjct 3756534 TATAGTATCTGGAGGTTCAACCTCAAGAGTAATGATCTTCCCCATTAGGGTTTTCACAAA 3756593
Query 172061 TATCTGCATTTTATT 172075
|||||||| || ||
Sbjct 3756594 AATCTGCATCTTGTT 3756608
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 905047941581400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |