Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mustela_20putorius_20furo_20[refseq_20GCF_5F000215625.1_202011-06- 02] 7,783 sequences; 2,410,879,678 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq76 89.7 2e-12 >seq76 Length=8897836 Score = 89.7 bits (98), Expect = 2e-12 Identities = 149/212 (70%), Gaps = 4/212 (2%) Strand=Plus/Plus Query 302607 ACCAGTTGTAGATGTTTTTACAGCTGTATCAATTAGACCAACACGACCACCCATAGCATG 302666 |||||| || || || || || || || || || || | ||||| ||||| ||||| Sbjct 6704786 ACCAGTCTCAGCAGTCTTGACGGCCGTGTCGATGAGCCCCTCGCGACCCCCCATGGCATG 6704845 Query 302667 GAAGAATAGCTCTTCCGGTCGTA--GCCCCCCAATAAAGGAGCTCTCAACGAAACCACGC 302724 |||||| | ||| || |||| ||| ||| ||| || |||| ||||| || || Sbjct 6704846 GAAGAAGAACTCGGTGGG-CGTAAGGCCTGCCAGGTAAG-AGTTCTCCACGAAGCCGCGG 6704903 Query 302725 GCCTCGGGCGAATCGTCGAACTTGGTAAAGTGTGGCAGGGTCCTGTTCTCATAGCCGTAT 302784 ||||||| | |||| |||| | ||||| |||| |||||||| || | || | Sbjct 6704904 CTCTCGGGCCCGTAGTCGTCCTTGATGAAGTGAGGCAAGGTCCTGTGCTTGAACCCAAAC 6704963 Query 302785 GGGATACGCTTTCCATCAACGTTCTGCTGTCC 302816 ||||| || || || || |||||||||||||| Sbjct 6704964 GGGATCCGTTTCCCTTCCACGTTCTGCTGTCC 6704995 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471670830808871