Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mustela_20putorius_20furo_20[refseq_20GCF_5F000215625.1_202011-06- 02] 7,783 sequences; 2,410,879,678 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq364 185 1e-40 seq2381 176 6e-38 seq237 176 6e-38 seq287 161 1e-33 seq193 102 1e-15 seq76 102 1e-15 seq215 96.9 4e-14 seq67 96.9 4e-14 seq14 95.1 1e-13 seq284 91.5 2e-12 >seq364 Length=770005 Score = 185 bits (204), Expect = 1e-40 Identities = 162/202 (80%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| |||||| ||| | |||||||||||| ||||| | |||||| | || Sbjct 527184 GCTTGGCCAGCTCGCCGGGCAGCAGCAGGCGCACGGCCGTCTGCACCTCGCGGGACGTGA 527125 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | ||| ||||||||| |||||||||| ||| ||||||| || ||||||| |||| | Sbjct 527124 TGGTGGAGCGCTTGTTGTAGTGCGCCAGGCGGGAGGCCTCGCTGGCGATGCGCTCGAAGA 527065 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||||||||| ||||||||||||| ||| | |||| |||||||| |||||||| Sbjct 527064 TGTCGTTGACGAACGAGTTCATGATGCCCATGGCCTTGGACGAGATGCCAGTGTCGGGGT 527005 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 |||||||||||||||||||||| Sbjct 527004 GCACCTGCTTGAGCACCTTGTA 526983 Score = 185 bits (204), Expect = 1e-40 Identities = 162/202 (80%), Gaps = 0/202 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| |||||| ||| | |||||||||||| ||||| | |||||| | || Sbjct 531407 GCTTGGCCAGCTCGCCGGGCAGCAGCAGGCGCACGGCCGTCTGCACCTCGCGGGACGTGA 531466 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | ||| ||||||||| |||||||||| ||| ||||||| || ||||||| |||| | Sbjct 531467 TGGTGGAGCGCTTGTTGTAGTGCGCCAGGCGGGAGGCCTCGCTGGCGATGCGCTCGAAGA 531526 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||||||||| ||||||||||||| ||| | |||| |||||||| |||||||| Sbjct 531527 TGTCGTTGACGAACGAGTTCATGATGCCCATGGCCTTGGACGAGATGCCAGTGTCGGGGT 531586 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 |||||||||||||||||||||| Sbjct 531587 GCACCTGCTTGAGCACCTTGTA 531608 >seq2381 Length=2675 Score = 176 bits (194), Expect = 6e-38 Identities = 160/202 (79%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| |||||| ||| | |||||||||||| ||||||||||| |||| || Sbjct 2555 GCTTGGCCAGCTCGCCGGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCCCGCGACGGGA 2496 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | ||| ||||||||| | |||||||| ||| ||||||| | ||||||| |||| | Sbjct 2495 TGGTGGAGCGCTTGTTGTACTGCGCCAGGCGGGAGGCCTCGCCGGCGATGCGCTCGAAGA 2436 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||||||||| || ||||||||||| ||| | |||| |||||||| ||| |||| Sbjct 2435 TGTCGTTGACGAAGGAGTTCATGACGCCCATGGCCTTGGACGAGATGCCGGTGTCCGGGT 2376 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 | |||||||||||||||||||| Sbjct 2375 GTACCTGCTTGAGCACCTTGTA 2354 >seq237 Length=2526385 Score = 176 bits (194), Expect = 6e-38 Identities = 160/202 (79%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| |||||| ||| | |||||||||||| ||||||||||| |||| || Sbjct 2194043 GCTTGGCCAGCTCGCCGGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCCCGCGACGTGA 2193984 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | ||| ||||||||| | |||||||| ||| ||||||| | ||||||| |||| | Sbjct 2193983 TGGTGGAGCGCTTGTTGTAATGCGCCAGGCGGGAGGCCTCGCCGGCGATGCGCTCGAAGA 2193924 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||||||||| || |||||||||| ||| | |||| |||||||| ||| |||| Sbjct 2193923 TGTCGTTGACGAAGGAGTTCATGATGCCCATGGCCTTGGACGAGATGCCGGTGTCCGGGT 2193864 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 |||||||||||||||||||||| Sbjct 2193863 GCACCTGCTTGAGCACCTTGTA 2193842 Score = 176 bits (194), Expect = 6e-38 Identities = 160/202 (79%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| |||||| ||| | |||||||||||| ||||||||||| |||| || Sbjct 2217925 GCTTGGCCAGCTCGCCGGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCCCGCGACGGGA 2217866 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | ||| ||||||||| | |||||||| ||| ||||||| | ||||||| |||| | Sbjct 2217865 TGGTGGAGCGCTTGTTGTACTGCGCCAGGCGGGAGGCCTCGCCGGCGATGCGCTCGAAGA 2217806 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||||||||| || ||||||||||| ||| | |||| |||||||| ||| |||| Sbjct 2217805 TGTCGTTGACGAAGGAGTTCATGACGCCCATGGCCTTGGACGAGATGCCGGTGTCCGGGT 2217746 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 | |||||||||||||||||||| Sbjct 2217745 GTACCTGCTTGAGCACCTTGTA 2217724 Score = 158 bits (174), Expect = 1e-32 Identities = 156/202 (77%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| |||||| ||| | |||||||||||| ||||||||||| |||| || Sbjct 2255059 GCTTGGCCAGCTCGCCGGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCCCGCGACGTGA 2255000 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | ||| ||||||||| | |||||||| ||| ||||||| | ||||||| |||| | Sbjct 2254999 TGGTGGAGCGCTTGTTGTACTGCGCCAGTCGGGAGGCCTCGCCGGCGATGCGCTCGAAGA 2254940 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||||||||| || |||||||||| ||| | |||| |||||||| ||| |||| Sbjct 2254939 TGTCGTTGACGAAGGAGTTCATGATGCCCATGGCCTTGGACGAGATGCCGGTGTCCGGGT 2254880 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 |||||||||| | ||| || || Sbjct 2254879 GCACCTGCTTCAACACTTTATA 2254858 >seq287 Length=1644148 Score = 161 bits (178), Expect = 1e-33 Identities = 166/217 (76%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || ||| ||| | |||||||||||| ||||||||||| | | || Sbjct 622605 GCTTGGCCAGCTCCCCGGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCCCTGGACGTGA 622664 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || ||||||||| |||||||||| ||| |||||| ||||||| |||| | Sbjct 622665 TGGTCGAGCGCTTGTTGTAGTGCGCCAGGCGGGACGCCTCGCCCGCGATGCGCTCGAAGA 622724 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||||||||| ||||||||||||| ||| | |||| |||||||| |||||||| Sbjct 622725 TGTCGTTGACGAACGAGTTCATGATGCCCATGGCCTTGGACGAGATGCCGGTGTCGGGGT 622784 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATGAACGACGAGTA 1254559 |||||||||| ||||||||||| | | || |||||| Sbjct 622785 GCACCTGCTTCAGCACCTTGTACACGTACACCGAGTA 622821 Score = 161 bits (178), Expect = 1e-33 Identities = 166/217 (76%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || ||| ||| | |||||||||||| ||||||||||| | | || Sbjct 702054 GCTTGGCCAGCTCCCCGGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCCCTGGACGTGA 702113 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || ||||||||| |||||||||| ||| |||||| ||||||| |||| | Sbjct 702114 TGGTCGAGCGCTTGTTGTAGTGCGCCAGGCGGGACGCCTCGCCCGCGATGCGCTCGAAGA 702173 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||||||||| ||||||||||||| ||| | |||| |||||||| |||||||| Sbjct 702174 TGTCGTTGACGAACGAGTTCATGATGCCCATGGCCTTGGACGAGATGCCGGTGTCGGGGT 702233 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATGAACGACGAGTA 1254559 |||||||||| ||||||||||| | | || |||||| Sbjct 702234 GCACCTGCTTCAGCACCTTGTACACGTACACCGAGTA 702270 Score = 129 bits (142), Expect = 7e-24 Identities = 152/206 (74%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || ||| ||| | |||||||||||| ||||||||||| | | || Sbjct 1082054 GCTTGGCCAGCTCCCCGGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCCCTGGACGTGA 1082113 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || ||||||||| |||||||||| ||| |||||| ||||||| |||| | Sbjct 1082114 TGGTCGAGCGCTTGTTGTAGTGCGCCAGGCGGGACGCCTCGCCCGCGATGCGCTCGAAGA 1082173 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||| | ||||| || ||||||| ||| | || |||||||| ||| |||| Sbjct 1082174 TGTCCGTTACAAAGGAATTCATGATGCTCATGGCTTTCGAAGAGATGCCGGTGTCAGGGT 1082233 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATG 1254548 |||||||||| |||||||| |||||| Sbjct 1082234 GCACCTGCTTCAGCACCTTATAGATG 1082259 Score = 89.7 bits (98), Expect = 6e-12 Identities = 87/112 (78%), Gaps = 0/112 (0%) Strand=Plus/Minus Query 1254448 CGATGCGGTCGATCATGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGA 1254507 ||||||| |||| | || ||||| ||||||||||||| ||| | |||| |||| Sbjct 650193 CGATGCGCTCGAAGAGATCATTGACGAACGAGTTCATGATGCCCATGGCCTTGGACGAGA 650134 Query 1254508 TGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGTAGATGAACGACGAGTA 1254559 |||| |||||||||||||||||| ||||||||||| | | || |||||| Sbjct 650133 TGCCGGTGTCGGGGTGCACCTGCTTCAGCACCTTGTACACGTACACCGAGTA 650082 Score = 87.8 bits (96), Expect = 2e-11 Identities = 77/96 (80%), Gaps = 0/96 (0%) Strand=Plus/Plus Query 1254464 GTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGTG 1254523 ||||||||| ||||||||||||| ||| | |||| |||||||| ||||||||| Sbjct 682415 GTCGTTGACGAACGAGTTCATGATGCCCATGGCCTTGGACGAGATGCCGGTGTCGGGGTG 682474 Query 1254524 CACCTGCTTGAGCACCTTGTAGATGAACGACGAGTA 1254559 ||||||||| ||||||||||| | | || |||||| Sbjct 682475 CACCTGCTTCAGCACCTTGTACACGTACACCGAGTA 682510 >seq193 Length=3726686 Score = 102 bits (112), Expect = 1e-15 Identities = 101/131 (77%), Gaps = 0/131 (0%) Strand=Plus/Minus Query 1592165 ACCCTCTTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTT 1592224 || || ||||| | || || || || |||||| | |||||||| | |||| ||| || Sbjct 897856 ACACTGTTTGAACTTATTCTGGCTGCGAACTACTTAGACATCAAAGGTTTGCTTGATGTT 897797 Query 1592225 GGGTGCAAGTCTGTGGCCAACATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACC 1592284 |||||| |||| ||||| ||||||||||| || | || |||||||||||||||||| Sbjct 897796 ACATGCAAGACTGTTGCCAATATGATCAAGGGGAAAACTCCTGAGGAGATCCGCAAGACC 897737 Query 1592285 TTTAACATCAA 1592295 || || ||||| Sbjct 897736 TTCAATATCAA 897726 >seq76 Length=8897836 Score = 102 bits (112), Expect = 1e-15 Identities = 95/121 (79%), Gaps = 0/121 (0%) Strand=Plus/Minus Query 507105 AGCGGTTCAAGGGCAAGGAGGGTAGGATCCGCGGCAATTGCATGGGCAAGCGCGTCAACT 507164 ||||| | ||||||||||| || || |||| || || ||||||||||||||| ||| Sbjct 6708671 AGCGGCTGAAGGGCAAGGAAGGCCGGGTCCGAGGGAACCTCATGGGCAAGCGCGTGGACT 6708612 Query 507165 TTACCGCGCGCGCCGTCATCAGCCCCGACCCCGAGATCGACATTGACGAGGTGGGCGTGC 507224 | | |||||| ||||||||| ||||||||| | || ||| ||| |||||||||||| Sbjct 6708611 TCTCAGCGCGCACCGTCATCACTCCCGACCCCAACCTCTCCATCGACCAGGTGGGCGTGC 6708552 Query 507225 C 507225 | Sbjct 6708551 C 6708551 >seq215 Length=3144577 Score = 96.9 bits (106), Expect = 4e-14 Identities = 149/209 (71%), Gaps = 8/209 (4%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGC-CG 1254401 || ||| ||| || || ||| | |||||| ||||| ||||||| || || | | || Sbjct 112717 GCTTGGTCAGCTCCCCAGGCAGCAGCAGGCGGACGGCCGTCTGGACTTCCCGGGAGGTCG 112658 Query 1254402 ATCGTGTTGCGCTTGTTCGAGTGC---GCCAGACGGCCGGCCTCGGTGCCGATGCGGTCG 1254458 | ||| | || | ||||| | ||||| ||| | |||||| | | || ||| Sbjct 112657 GT-GTGGTTCG---GCCCGAGTACTGGGCCAGCCGGGCAGCCTCGCCAGCCAGACGTTCG 112602 Query 1254459 ATCATGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCG 1254518 | ||| || || |||||||||||||||| ||| | |||| |||||||| | ||| Sbjct 112601 AACATATCATTCACAAACGAGTTCATGATGCTCATGGCCTTGGAAGAGATGCCAATGTCT 112542 Query 1254519 GGGTGCACCTGCTTGAGCACCTTGTAGAT 1254547 |||||| ||||||| |||||||||||||| Sbjct 112541 GGGTGCGCCTGCTTCAGCACCTTGTAGAT 112513 >seq67 Length=9811631 Score = 96.9 bits (106), Expect = 4e-14 Identities = 147/208 (71%), Gaps = 6/208 (3%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || ||| ||| | |||||||||||| ||||||| || || | | | Sbjct 9021640 GCTTGGCCAGCTCCCCGGGCAGCAGCAGGCGCACGGCCGTCTGGACTTCCCGGGAGGTCA 9021581 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGC---GCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGA 1254459 ||| | || | ||||| | ||||| ||| | ||||| | | | |||| Sbjct 9021580 GTGTGGTTCG---GCCCGAGTACTGGGCCAGCCGGGCAGCCTCACCAGCCAGACATTCGA 9021524 Query 1254460 TCATGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGG 1254519 || || || |||||||||||||| | ||| | |||| |||||||| | ||| | Sbjct 9021523 ACACATCATTCACAAACGAGTTCATTATGCTCATGGCCTTGGAAGAGATGCCAATGTCTG 9021464 Query 1254520 GGTGCACCTGCTTGAGCACCTTGTAGAT 1254547 ||||||||||||| |||||||||||||| Sbjct 9021463 GGTGCACCTGCTTCAGCACCTTGTAGAT 9021436 >seq14 Length=21695963 Score = 95.1 bits (104), Expect = 1e-13 Identities = 87/110 (79%), Gaps = 0/110 (0%) Strand=Plus/Plus Query 1592186 GCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTGTGGCCAAC 1592245 || || |||||| | |||||||| | |||| ||| || |||||| |||| ||||| Sbjct 19699366 GCTGCGAACTACTTAGACATCAAAGGTTTGCTTGATGTTACATGCAAGACTGTTGCCAAT 19699425 Query 1592246 ATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACATCAA 1592295 ||||||||||| || | || |||||||||||||||||||| || ||||| Sbjct 19699426 ATGATCAAGGGGAAAACTCCTGAGGAGATCCGCAAGACCTTCAATATCAA 19699475 >seq284 Length=1670487 Score = 91.5 bits (100), Expect = 2e-12 Identities = 125/175 (71%), Gaps = 0/175 (0%) Strand=Plus/Plus Query 1254368 CAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGATCGTGTTGCGCTTGTTCGAGTGCGC 1254427 |||| ||||||| ||||||||||| | | | ||| ||| ||||| | | ||| | || Sbjct 705593 CAGGTGCACGGCTGTCTGGATCTCCCTGGAGGTGATGGTGGAGCGCTGGGTGGAGCGGGC 705652 Query 1254428 CAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCATGAC 1254487 ||| || ||||||| | ||||||| |||| ||||| ||||| ||||| | || ||| Sbjct 705653 CAGGCGAAAGGCCTCGTCGGCGATGCGCTCGAAGATGTCCTTGACGAACGAATCCAAGAC 705712 Query 1254488 CGACATCGACTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTG 1254542 || | ||| || |||| || || | | ||| |||||||| || ||| || Sbjct 705713 GCTCACGGCCTTCTTCGAGAGGCTCAGGCCCTCGTGAACCTGCTTCAGAACCCTG 705767 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6106500490572211