Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Mustela_20putorius_20furo_20[refseq_20GCF_5F000215625.1_202011-06-
02] 7,783 sequences; 2,410,879,678 total letters
Query= NC_021923.1
Length=140633
Score E
Sequences producing significant alignments: (Bits) Value
seq2 132 4e-26
seq39 122 8e-23
seq237 116 3e-21
seq65 100 3e-16
seq125 86.0 6e-12
seq101 86.0 6e-12
seq50 84.2 2e-11
seq323 82.4 7e-11
>seq2
Length=40953715
Score = 132 bits (146), Expect = 4e-26
Identities = 166/228 (73%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762
||||||||| || | ||||| || || || || || ||||| ||||| || ||| || |
Sbjct 19232598 GATGCAGATTTTCGTAAAAACCCTTACGGGGAAGACCATTACTCTCGAGGTTGAACCCTC 19232539
Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
|| ||| |||||| || || |||||| || ||||| |||||||| ||||| |||||
Sbjct 19232538 GGATACAATAGAAAATGTGAAGGCAAAGATTCAGGACAAGGAAGGAATTCCTCCTGATCA 19232479
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882
|| | |||||||||| || || || ||||| ||| | | |||| || || ||
Sbjct 19232478 GCAGAGACTGATCTTTGCTGGCAAGCAACTGGAAGATGGACGTACTTTGTCTGACTACAA 19232419
Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930
|||||||||||| || || || || | |||||| || | || || ||
Sbjct 19232418 CATTCAAAAGGAGTCCACTCTTCATCTTGTGTTGAGACTTCGTGGTGG 19232371
>seq39
Length=13401118
Score = 122 bits (134), Expect = 8e-23
Identities = 154/212 (73%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 24701 ACGATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCC 24760
|| ||||||||||| | || || || || ||||| || || || || || || || ||
Sbjct 1513281 ACAATGCAGATCTTCGTGAAGACCCTGACGGGTAAGACCATCACCCTGGAGGTGGAGCCC 1513340
Query 24761 ACCGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGAT 24820
| ||||| | || | || || |||||||| ||||| || || || || || ||
Sbjct 1513341 AGTGACACCATCGAGAACGTCAAGGCGAAGATCCAGGACAAGGAGGGCATCCCCCCTGAC 1513400
Query 24821 CAACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTAT 24880
|| || | ||||||||||| |||||||||||||||||| | | | | |||| || ||
Sbjct 1513401 CAGCAGAGGTTGATCTTTGCTGGGAAACAGCTGGAGGATGGGCGCACCCTGTCCGACTAC 1513460
Query 24881 AACATTCAAAAGGAATCGACACTACACTTGGT 24912
||||| || ||||| ||||| || ||| ||||
Sbjct 1513461 AACATCCAGAAGGAGTCGACTCTGCACCTGGT 1513492
Score = 82.4 bits (90), Expect = 7e-11
Identities = 95/128 (74%), Gaps = 0/128 (0%)
Strand=Plus/Plus
Query 24803 GAAGGAATACCTCCCGATCAACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCG 24862
|| || || || || || || || | ||||||||||| |||||||||||||||||| |
Sbjct 1515668 GAGGGCATCCCCCCTGACCAGCAGAGGTTGATCTTTGCTGGGAAACAGCTGGAGGATGGG 1515727
Query 24863 AGAAACATGTCAGATTATAACATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTG 24922
| | | |||| || || ||||| || ||||| || || || ||| |||| |||| |||
Sbjct 1515728 CGCACCCTGTCCGACTACAACATCCAGAAGGAGTCCACTCTTCACCTGGTTCTGCGCTTG 1515787
Query 24923 CGCGGAGG 24930
| || ||
Sbjct 1515788 AGGGGTGG 1515795
>seq237
Length=2526385
Score = 116 bits (128), Expect = 3e-21
Identities = 153/212 (72%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 24719 AAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACCGACACAGTAGAAACG 24778
|| || || || ||||| || || || || || || || ||| ||||| | || |
Sbjct 2104010 AAGACCCTGACGGGTAAGACCATCACCCTGGAGGTGGAGCCCAGTGACACCATCGAGAAT 2103951
Query 24779 GTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTT 24838
|| ||| ||||| ||||| ||||| || || || || || || || | |||||||||
Sbjct 2103950 GTGAAAGGGAAGATTCAAGAGAAAGAGGGCATCCCCCCTGACCAGCAGAGGTTGATCTTT 2103891
Query 24839 GCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGGAATCG 24898
||||||||||||||||||||| | | | | |||| || || ||||| || ||||| ||
Sbjct 2103890 GCCGGGAAACAGCTGGAGGATGGGCGCACCCTGTCCGACTACAACATCCAGAAGGAGTCC 2103831
Query 24899 ACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930
|| || ||| |||| |||| ||| | || ||
Sbjct 2103830 ACTCTTCACCTGGTTCTGCGCTTGAGGGGTGG 2103799
Score = 100 bits (110), Expect = 3e-16
Identities = 97/125 (78%), Gaps = 0/125 (0%)
Strand=Plus/Minus
Query 24788 AAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTTGCCGGGAAA 24847
|||||||| ||||| || || || || || || || || | ||||||||||| ||||||
Sbjct 2104197 AAGATCCAGGACAAGGAGGGCATCCCCCCTGACCAGCAGAGGTTGATCTTTGCTGGGAAA 2104138
Query 24848 CAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGGAATCGACACTACAC 24907
|||||||||||| | | | | |||| || || ||||| || ||||| ||||| || |||
Sbjct 2104137 CAGCTGGAGGATGGGCGCACCCTGTCCGACTACAACATCCAGAAGGAGTCGACTCTGCAC 2104078
Query 24908 TTGGT 24912
||||
Sbjct 2104077 CTGGT 2104073
>seq65
Length=10028950
Score = 100 bits (110), Expect = 3e-16
Identities = 159/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||||||||| | || || || ||||| || || || || || || || || |||
Sbjct 4317956 ATGCAGATCTTCGTGAAGACCCTGACCGGCAAGACCATCACTCTGGAGGTGGAGCCCAGT 4318015
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | |||| ||||| | |||||||||||||||||||| || || || || ||
Sbjct 4318016 GACACCATTGAAAATGTAAAGGACAAGATCCAAGACAAAGAAGGCATCCCCCCTGACCAG 4318075
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| | | |||||||| || || ||||| || ||| | | | || ||||| |||
Sbjct 4318076 CAGAGGCTTATCTTTGCTGGCAAGCAGCTCGAAGATGGCCGCACTCTTTCTGATTACAAC 4318135
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931
|| || || || || || || || |||| |||| || | || |||
Sbjct 4318136 ATCCAGAAAGAGTCCACCCTGCATCTGGTCCTGCGCCTGAGGGGTGGC 4318183
>seq125
Length=6462000
Score = 86.0 bits (94), Expect = 6e-12
Identities = 113/157 (72%), Gaps = 0/157 (0%)
Strand=Plus/Minus
Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762
|||||||||||| || || || || || || || || || || || || || || |||
Sbjct 2357656 GATGCAGATCTTCATGAAGACCCTGACAGGCAAGACCATCACCCTTGAGGTTGAGCCCAG 2357597
Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
|||||| | || | || ||| || ||| ||||||| || || || || || |||||
Sbjct 2357596 CGACACCATTGAGAATGTCAAAGCCAAAATCGAAGACAAGGAGGGCATCCCCCCTGATCA 2357537
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGAT 24859
|| || |||| |||| || ||||||||||| |||
Sbjct 2357536 GCAGTGTCTGATTTTTGTGGGCAAACAGCTGGAAGAT 2357500
>seq101
Length=7325712
Score = 86.0 bits (94), Expect = 6e-12
Identities = 157/228 (69%), Gaps = 3/228 (1%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
|||||||| || | || || || ||||| || || || || || || || || ||
Sbjct 128020 ATGCAGATTTTCGTGAAGACCCTGACCGGCAAGACCATCACCCTGGAGGTGGAGCTCAGT 127961
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | |||| || || ||||||||||||||||| || || || ||||| ||
Sbjct 127960 GACACCG-AGAAT--GTGAAGGCCAAGATCCAAGACAAAGAGGGCATCCCCCCCGACCAG 127904
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| | | |||||||| || || |||||||| ||| | | | || ||||| |||
Sbjct 127903 CAGAGGCTTATCTTTGCTGGCAAGCAGCTGGAAGATGGCCGCACTCTTTCTGATTACAAC 127844
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931
|| || || || || || || ||| |||| |||| || | || |||
Sbjct 127843 ATCCAGAAAGAGTCCACTCTGCACCTGGTCCTGCGCCTGAGGGGTGGC 127796
>seq50
Length=12588045
Score = 84.2 bits (92), Expect = 2e-11
Identities = 152/217 (70%), Gaps = 4/217 (2%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCC-AC 24762
|||||||| || | || || || ||||| || || || || || |||| | |||| |
Sbjct 11770856 ATGCAGATTTTCGTGAAGACCCTGACCGGCAAGACCATCAC-CTTGAAGGTGGAGCCCAA 11770798
Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
||||| | || | || || ||||||||||| ||||| || || || | ||||||
Sbjct 11770797 TGACACCATCGAGAATGTGAAGGCCAAGATCCAAGATAAAGAGGGCATCCCCCACGATCA 11770738
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAAC-ATGTCAGATTATA 24881
|| | | ||||||||||| || |||||||| || | | | || | || ||||| |
Sbjct 11770737 GCAGAGGCTTATCTTTGCCGGCAAGCAGCTGGAAGA-TGGCCACACTCTTTCTGATTACA 11770679
Query 24882 ACATTCAAAAGGAATCGACACTACACTTGGTGTTGCG 24918
|||| || || || || || || ||| |||| ||||
Sbjct 11770678 ACATCCAGAAAGAGTCCACCCTGCACCTGGTCCTGCG 11770642
>seq323
Length=1159590
Score = 82.4 bits (90), Expect = 7e-11
Identities = 155/228 (68%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
|||||||| || | || || || ||||| || || || || || || || || |||
Sbjct 303619 ATGCAGATTTTCGTGAAGACCCTGACCGGCAAGACCATCACCCTGGAGGTGGAGCCCAGT 303560
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || || ||||||||||| || || || || || ||||| ||
Sbjct 303559 GACACCATCGAGAATGTGAAGGCCAAGATCCAAGATAAGGAGGGCATCCCCCCCGACCAG 303500
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| | | |||||||| || || |||||||| ||| | | | || ||||| |||
Sbjct 303499 CAGAGGCTTATCTTTGCTGGCAAGCAGCTGGAAGATGGCCGCACTCTTTCTGATTACAAC 303440
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931
|| || || || || || || ||| |||| |||| || | || |||
Sbjct 303439 ATCCAGAAAGAGTCCACTCTGCACCTGGTCCTGCGCCTGAGGGGTGGC 303392
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 449853830587240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |