Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mustela_20putorius_20furo_20[refseq_20GCF_5F000215625.1_202011-06- 02] 7,783 sequences; 2,410,879,678 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq2 132 4e-26 seq39 122 8e-23 seq237 116 3e-21 seq65 100 3e-16 seq125 86.0 6e-12 seq101 86.0 6e-12 seq50 84.2 2e-11 seq323 82.4 7e-11 >seq2 Length=40953715 Score = 132 bits (146), Expect = 4e-26 Identities = 166/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 ||||||||| || | ||||| || || || || || ||||| ||||| || ||| || | Sbjct 19232598 GATGCAGATTTTCGTAAAAACCCTTACGGGGAAGACCATTACTCTCGAGGTTGAACCCTC 19232539 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 || ||| |||||| || || |||||| || ||||| |||||||| ||||| ||||| Sbjct 19232538 GGATACAATAGAAAATGTGAAGGCAAAGATTCAGGACAAGGAAGGAATTCCTCCTGATCA 19232479 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 || | |||||||||| || || || ||||| ||| | | |||| || || || Sbjct 19232478 GCAGAGACTGATCTTTGCTGGCAAGCAACTGGAAGATGGACGTACTTTGTCTGACTACAA 19232419 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 |||||||||||| || || || || | |||||| || | || || || Sbjct 19232418 CATTCAAAAGGAGTCCACTCTTCATCTTGTGTTGAGACTTCGTGGTGG 19232371 >seq39 Length=13401118 Score = 122 bits (134), Expect = 8e-23 Identities = 154/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 24701 ACGATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCC 24760 || ||||||||||| | || || || || ||||| || || || || || || || || Sbjct 1513281 ACAATGCAGATCTTCGTGAAGACCCTGACGGGTAAGACCATCACCCTGGAGGTGGAGCCC 1513340 Query 24761 ACCGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGAT 24820 | ||||| | || | || || |||||||| ||||| || || || || || || Sbjct 1513341 AGTGACACCATCGAGAACGTCAAGGCGAAGATCCAGGACAAGGAGGGCATCCCCCCTGAC 1513400 Query 24821 CAACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTAT 24880 || || | ||||||||||| |||||||||||||||||| | | | | |||| || || Sbjct 1513401 CAGCAGAGGTTGATCTTTGCTGGGAAACAGCTGGAGGATGGGCGCACCCTGTCCGACTAC 1513460 Query 24881 AACATTCAAAAGGAATCGACACTACACTTGGT 24912 ||||| || ||||| ||||| || ||| |||| Sbjct 1513461 AACATCCAGAAGGAGTCGACTCTGCACCTGGT 1513492 Score = 82.4 bits (90), Expect = 7e-11 Identities = 95/128 (74%), Gaps = 0/128 (0%) Strand=Plus/Plus Query 24803 GAAGGAATACCTCCCGATCAACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCG 24862 || || || || || || || || | ||||||||||| |||||||||||||||||| | Sbjct 1515668 GAGGGCATCCCCCCTGACCAGCAGAGGTTGATCTTTGCTGGGAAACAGCTGGAGGATGGG 1515727 Query 24863 AGAAACATGTCAGATTATAACATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTG 24922 | | | |||| || || ||||| || ||||| || || || ||| |||| |||| ||| Sbjct 1515728 CGCACCCTGTCCGACTACAACATCCAGAAGGAGTCCACTCTTCACCTGGTTCTGCGCTTG 1515787 Query 24923 CGCGGAGG 24930 | || || Sbjct 1515788 AGGGGTGG 1515795 >seq237 Length=2526385 Score = 116 bits (128), Expect = 3e-21 Identities = 153/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 24719 AAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACCGACACAGTAGAAACG 24778 || || || || ||||| || || || || || || || ||| ||||| | || | Sbjct 2104010 AAGACCCTGACGGGTAAGACCATCACCCTGGAGGTGGAGCCCAGTGACACCATCGAGAAT 2103951 Query 24779 GTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTT 24838 || ||| ||||| ||||| ||||| || || || || || || || | ||||||||| Sbjct 2103950 GTGAAAGGGAAGATTCAAGAGAAAGAGGGCATCCCCCCTGACCAGCAGAGGTTGATCTTT 2103891 Query 24839 GCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGGAATCG 24898 ||||||||||||||||||||| | | | | |||| || || ||||| || ||||| || Sbjct 2103890 GCCGGGAAACAGCTGGAGGATGGGCGCACCCTGTCCGACTACAACATCCAGAAGGAGTCC 2103831 Query 24899 ACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 || || ||| |||| |||| ||| | || || Sbjct 2103830 ACTCTTCACCTGGTTCTGCGCTTGAGGGGTGG 2103799 Score = 100 bits (110), Expect = 3e-16 Identities = 97/125 (78%), Gaps = 0/125 (0%) Strand=Plus/Minus Query 24788 AAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTTGCCGGGAAA 24847 |||||||| ||||| || || || || || || || || | ||||||||||| |||||| Sbjct 2104197 AAGATCCAGGACAAGGAGGGCATCCCCCCTGACCAGCAGAGGTTGATCTTTGCTGGGAAA 2104138 Query 24848 CAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGGAATCGACACTACAC 24907 |||||||||||| | | | | |||| || || ||||| || ||||| ||||| || ||| Sbjct 2104137 CAGCTGGAGGATGGGCGCACCCTGTCCGACTACAACATCCAGAAGGAGTCGACTCTGCAC 2104078 Query 24908 TTGGT 24912 |||| Sbjct 2104077 CTGGT 2104073 >seq65 Length=10028950 Score = 100 bits (110), Expect = 3e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || || || ||||| || || || || || || || || ||| Sbjct 4317956 ATGCAGATCTTCGTGAAGACCCTGACCGGCAAGACCATCACTCTGGAGGTGGAGCCCAGT 4318015 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | |||| ||||| | |||||||||||||||||||| || || || || || Sbjct 4318016 GACACCATTGAAAATGTAAAGGACAAGATCCAAGACAAAGAAGGCATCCCCCCTGACCAG 4318075 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || | | |||||||| || || ||||| || ||| | | | || ||||| ||| Sbjct 4318076 CAGAGGCTTATCTTTGCTGGCAAGCAGCTCGAAGATGGCCGCACTCTTTCTGATTACAAC 4318135 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931 || || || || || || || || |||| |||| || | || ||| Sbjct 4318136 ATCCAGAAAGAGTCCACCCTGCATCTGGTCCTGCGCCTGAGGGGTGGC 4318183 >seq125 Length=6462000 Score = 86.0 bits (94), Expect = 6e-12 Identities = 113/157 (72%), Gaps = 0/157 (0%) Strand=Plus/Minus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 |||||||||||| || || || || || || || || || || || || || || ||| Sbjct 2357656 GATGCAGATCTTCATGAAGACCCTGACAGGCAAGACCATCACCCTTGAGGTTGAGCCCAG 2357597 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 |||||| | || | || ||| || ||| ||||||| || || || || || ||||| Sbjct 2357596 CGACACCATTGAGAATGTCAAAGCCAAAATCGAAGACAAGGAGGGCATCCCCCCTGATCA 2357537 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGAT 24859 || || |||| |||| || ||||||||||| ||| Sbjct 2357536 GCAGTGTCTGATTTTTGTGGGCAAACAGCTGGAAGAT 2357500 >seq101 Length=7325712 Score = 86.0 bits (94), Expect = 6e-12 Identities = 157/228 (69%), Gaps = 3/228 (1%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||| || | || || || ||||| || || || || || || || || || Sbjct 128020 ATGCAGATTTTCGTGAAGACCCTGACCGGCAAGACCATCACCCTGGAGGTGGAGCTCAGT 127961 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | |||| || || ||||||||||||||||| || || || ||||| || Sbjct 127960 GACACCG-AGAAT--GTGAAGGCCAAGATCCAAGACAAAGAGGGCATCCCCCCCGACCAG 127904 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || | | |||||||| || || |||||||| ||| | | | || ||||| ||| Sbjct 127903 CAGAGGCTTATCTTTGCTGGCAAGCAGCTGGAAGATGGCCGCACTCTTTCTGATTACAAC 127844 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931 || || || || || || || ||| |||| |||| || | || ||| Sbjct 127843 ATCCAGAAAGAGTCCACTCTGCACCTGGTCCTGCGCCTGAGGGGTGGC 127796 >seq50 Length=12588045 Score = 84.2 bits (92), Expect = 2e-11 Identities = 152/217 (70%), Gaps = 4/217 (2%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCC-AC 24762 |||||||| || | || || || ||||| || || || || || |||| | |||| | Sbjct 11770856 ATGCAGATTTTCGTGAAGACCCTGACCGGCAAGACCATCAC-CTTGAAGGTGGAGCCCAA 11770798 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 ||||| | || | || || ||||||||||| ||||| || || || | |||||| Sbjct 11770797 TGACACCATCGAGAATGTGAAGGCCAAGATCCAAGATAAAGAGGGCATCCCCCACGATCA 11770738 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAAC-ATGTCAGATTATA 24881 || | | ||||||||||| || |||||||| || | | | || | || ||||| | Sbjct 11770737 GCAGAGGCTTATCTTTGCCGGCAAGCAGCTGGAAGA-TGGCCACACTCTTTCTGATTACA 11770679 Query 24882 ACATTCAAAAGGAATCGACACTACACTTGGTGTTGCG 24918 |||| || || || || || || ||| |||| |||| Sbjct 11770678 ACATCCAGAAAGAGTCCACCCTGCACCTGGTCCTGCG 11770642 >seq323 Length=1159590 Score = 82.4 bits (90), Expect = 7e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||| || | || || || ||||| || || || || || || || || ||| Sbjct 303619 ATGCAGATTTTCGTGAAGACCCTGACCGGCAAGACCATCACCCTGGAGGTGGAGCCCAGT 303560 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || ||||||||||| || || || || || ||||| || Sbjct 303559 GACACCATCGAGAATGTGAAGGCCAAGATCCAAGATAAGGAGGGCATCCCCCCCGACCAG 303500 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || | | |||||||| || || |||||||| ||| | | | || ||||| ||| Sbjct 303499 CAGAGGCTTATCTTTGCTGGCAAGCAGCTGGAAGATGGCCGCACTCTTTCTGATTACAAC 303440 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931 || || || || || || || ||| |||| |||| || | || ||| Sbjct 303439 ATCCAGAAAGAGTCCACTCTGCACCTGGTCCTGCGCCTGAGGGGTGGC 303392 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449853830587240