Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mustela_20putorius_20furo_20[refseq_20GCF_5F000215625.1_202011-06- 02] 7,783 sequences; 2,410,879,678 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq39 134 9e-27 seq323 114 8e-21 seq65 114 8e-21 seq50 111 1e-19 seq101 109 4e-19 seq2 104 2e-17 seq237 89.7 3e-13 seq125 89.7 3e-13 >seq39 Length=13401118 Score = 134 bits (148), Expect = 9e-27 Identities = 157/212 (74%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||||||||| | || ||||||||| ||||| ||||| || ||| ||||| |||| Sbjct 1513495 AGGACCAGGTGCAGAGTCGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGCCCATCC 1513436 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 ||||| || || || || ||||||| | |||||||| | || | ||||||||||| Sbjct 1513435 TCCAGCTGTTTCCCAGCAAAGATCAACCTCTGCTGGTCAGGGGGGATGCCCTCCTTGTCC 1513376 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || || |||||| | || | ||| ||| ||| || || | ||| |||||| Sbjct 1513375 TGGATCTTCGCCTTGACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTC 1513316 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || ||||| |||||||| || ||||||||||| Sbjct 1513315 TTACCCGTCAGGGTCTTCACGAAGATCTGCAT 1513284 >seq323 Length=1159590 Score = 114 bits (126), Expect = 8e-21 Identities = 164/229 (72%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810 || ||||||| | |||||||||||| | ||| ||| ||||| ||||| || || || Sbjct 303393 CCACCCCTCAGGCGCAGGACCAGGTGCAGAGTGGACTCTTTCTGGATGTTGTAATCAGAA 303452 Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870 || |||| |||| ||||| ||||| || || ||||| || | |||||||| | || Sbjct 303453 AGAGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATAAGCCTCTGCTGGTCGGGGGGG 303512 Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGA 34928 | |||||||| || | || || || || || || || | ||| ||| ||| | Sbjct 303513 ATGCCCTCCTTATCTTGGATCTTGGCCTTCAC--ATTCTCGATGGTGTCACTGGGCTCCA 303570 Query 34929 CATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 | || | ||| |||||||| || || |||||||| || || |||||||| Sbjct 303571 CCTCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAAATCTGCAT 303619 >seq65 Length=10028950 Score = 114 bits (126), Expect = 8e-21 Identities = 162/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810 || ||||||| | ||||||||| || | |||| ||| ||||| ||||| || || || Sbjct 4318182 CCACCCCTCAGGCGCAGGACCAGATGCAGGGTGGACTCTTTCTGGATGTTGTAATCAGAA 4318123 Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870 || |||| |||| || || ||||| || || ||||| || | |||||||| | || Sbjct 4318122 AGAGTGCGGCCATCTTCGAGCTGCTTGCCAGCAAAGATAAGCCTCTGCTGGTCAGGGGGG 4318063 Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACA 34930 | || || ||||| | || || | || || | | || | ||| ||| ||| || Sbjct 4318062 ATGCCTTCTTTGTCTTGGATCTTGTCCTTTACATTTTCAATGGTGTCACTGGGCTCCACC 4318003 Query 34931 TCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 || | || |||||||| || || |||||||| || |||||||||||| Sbjct 4318002 TCCAGAGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCATG 4317955 Score = 105 bits (116), Expect = 4e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810 || |||||||| | || |||||||| | || ||| ||||| ||||| || || || Sbjct 4318410 CCACCCCTCAAACGGAGAACCAGGTGGAGAGTTGACTCTTTCTGGATGTTGTAATCAGAA 4318351 Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870 || |||| |||| || || ||||| || || ||||| || | |||||||| | || Sbjct 4318350 AGAGTGCGGCCATCTTCTAGCTGCTTGCCTGCAAAGATAAGCCTCTGCTGGTCAGGGGGG 4318291 Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACA 34930 | |||||||| || | || || || || | | || | ||| | | ||| || Sbjct 4318290 ATGCCCTCCTTATCTTGGATCTTGGCCTTTACATTTTCAATGGTGTCACTAGGCTCCACC 4318231 Query 34931 TCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 || | ||| |||||||| || || |||||||| || |||||||||||| Sbjct 4318230 TCCAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACGAAGATCTGCATG 4318183 >seq50 Length=12588045 Score = 111 bits (122), Expect = 1e-19 Identities = 163/229 (71%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810 || |||||| | |||||||||||| | |||| ||| ||||| ||||| || || || Sbjct 11770630 CCACCCCTCCGGCGCAGGACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAATCAGAA 11770689 Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870 || || | |||| ||||| ||||| ||||| ||||| || | ||||| || || || Sbjct 11770690 AGAGTGTGGCCATCTTCCAGCTGCTTGCCGGCAAAGATAAGCCTCTGCTGATCGTGGGGG 11770749 Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGA 34928 | ||||| || || | || || || || || || || | ||||||| ||| | Sbjct 11770750 ATGCCCTCTTTATCTTGGATCTTGGCCTTCAC--ATTCTCGATGGTGTCATTGGGCTCCA 11770807 Query 34929 CATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 | | | ||| |||||||| || || |||||||| || || |||||||| Sbjct 11770808 CCTTCAAGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAAATCTGCAT 11770856 Score = 93.3 bits (102), Expect = 3e-14 Identities = 158/228 (69%), Gaps = 1/228 (0%) Strand=Plus/Plus Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810 || ||||||| | || |||||||| | || ||| ||||| ||||| || || || Sbjct 11770175 CCACCCCTCAGACGGAGAACCAGGTGGAGAGTTGACTCTTTCTGGATGTTGTAATCAGAA 11770234 Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870 || ||| |||| || || ||||| ||||| ||||| || | |||||||| | || Sbjct 11770235 AGAGTGCAGCCATCTTCTAGCTGCTTGCCGGCAAAGATAAGCCTCTGCTGGTCACGGGG- 11770293 Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACA 34930 | ||||| || || | || || || || | | || | ||| ||| ||| || Sbjct 11770294 ATGCCCTCTTTATCTTGGATCTTGGCCTTTACATTTTCAATGGTGTCACTGGGCTCCACC 11770353 Query 34931 TCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 || | || |||||||| || || |||||||| || |||||||||||| Sbjct 11770354 TCCAGAGTGATGGTCTTGCCAGTCAGGGTCTTCACGAAGATCTGCATG 11770401 >seq101 Length=7325712 Score = 109 bits (120), Expect = 4e-19 Identities = 163/228 (71%), Gaps = 5/228 (2%) Strand=Plus/Plus Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810 || ||||||| | |||||||||||| | ||| ||| ||||| ||||| || || || Sbjct 127797 CCACCCCTCAGGCGCAGGACCAGGTGCAGAGTGGACTCTTTCTGGATGTTGTAATCAGAA 127856 Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870 || |||| |||| ||||| ||||| || || ||||| || | |||||||| | || Sbjct 127857 AGAGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATAAGCCTCTGCTGGTCGGGGGGG 127916 Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGAT-TCATTGGCCTCGAC 34929 | ||||| ||||| | || || || || || | ||| | ||| || ||| || Sbjct 127917 ATGCCCTCTTTGTCTTGGATCTTGGCCTTCAC--AT--TCTCGGTGTCACTGAGCTCCAC 127972 Query 34930 ATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || | ||| |||||||| || || |||||||| || || |||||||| Sbjct 127973 CTCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAAATCTGCAT 128020 Score = 105 bits (116), Expect = 4e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810 || || |||| || |||||||| || | ||| || ||||| ||||| || || || Sbjct 127569 CCACCTCTCAGCCAAAGGACCAGATGCAGAGTGGATTCGTTCTGGATGTTGTAATCAGAA 127628 Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870 || |||| |||| ||||| ||||| || || ||||| || | |||||||| | || Sbjct 127629 AGAGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATAAGCCTCTGCTGGTCAGGGGGG 127688 Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACA 34930 | |||||||| || | || || ||| || | | || | ||| | | ||| || Sbjct 127689 ATGCCCTCCTTATCTTGGATCTTGGCTTTCACATTTTCAATGGTGTCACTAGGCTCCACC 127748 Query 34931 TCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 || | || |||||||| || || |||||||| || |||||||||||| Sbjct 127749 TCCAGAGTGATGGTCTTGCCAGTCAGGGTCTTCACGAAGATCTGCATG 127796 >seq2 Length=40953715 Score = 104 bits (114), Expect = 2e-17 Identities = 152/215 (71%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 34763 CTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCA 34822 |||| || || |||| ||| |||||| |||||||| ||||| || | | || || Sbjct 19232383 CTCAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTACGTCCA 19232442 Query 34823 TCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTG 34882 || ||||||||||| || || |||||||||| ||||| || | || | || |||||| Sbjct 19232443 TCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTCTGCTGATCAGGAGGAATTCCTTCCTTG 19232502 Query 34883 TCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATG 34942 || | || ||| || || | |||| | || || || || || | || ||| Sbjct 19232503 TCCTGAATCTTTGCCTTCACATTTTCTATTGTATCCGAGGGTTCAACCTCGAGAGTAATG 19232562 Query 34943 GTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 ||||| ||||| ||||| ||||| || |||||||| Sbjct 19232563 GTCTTCCCCGTAAGGGTTTTTACGAAAATCTGCAT 19232597 >seq237 Length=2526385 Score = 89.7 bits (98), Expect = 3e-13 Identities = 91/119 (76%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||||||||| | || ||||||||| ||||| ||||| || ||| ||||| |||| Sbjct 2104070 AGGACCAGGTGCAGAGTCGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGCCCATCC 2104129 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884 ||||| || || || || ||||||| | |||||||| | || | ||||||||||| Sbjct 2104130 TCCAGCTGTTTCCCAGCAAAGATCAACCTCTGCTGGTCAGGGGGGATGCCCTCCTTGTC 2104188 >seq125 Length=6462000 Score = 89.7 bits (98), Expect = 3e-13 Identities = 147/210 (70%), Gaps = 4/210 (2%) Strand=Plus/Plus Query 34770 CCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCA 34829 ||||||| | || | ||| ||||| || || | || || || ||| |||| |||| Sbjct 2357448 CCAGGTGCAGGGCGGACTCTTTCTGGATATTGTGATCTGACAGAGCGCGGCCATCTTCCA 2357507 Query 34830 GTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTA 34889 | || || || | || ||||| | ||||| || | || | ||||||||||| | | Sbjct 2357508 GCTGTTTGCCCACAAAAATCAGACACTGCTGATCAGGGGGGATGCCCTCCTTGTCTTCGA 2357567 Query 34890 TTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTT 34947 |||| |||||| || || || | || ||| ||| || |||| ||| |||||||| Sbjct 2357568 TTTTGGCTTTGAC--ATTCTCAATGGTGTCGCTGGGCTCAACCTCAAGGGTGATGGTCTT 2357625 Query 34948 TCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || || |||||||| | ||||||||||| Sbjct 2357626 GCCTGTCAGGGTCTTCATGAAGATCTGCAT 2357655 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325661906307677