Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Mustela_20putorius_20furo_20[refseq_20GCF_5F000215625.1_202011-06-
02] 7,783 sequences; 2,410,879,678 total letters
Query= NC_023177.1
Length=124688
Score E
Sequences producing significant alignments: (Bits) Value
seq50 82.4 6e-11
seq2 82.4 6e-11
>seq50
Length=12588045
Score = 82.4 bits (90), Expect = 6e-11
Identities = 152/222 (68%), Gaps = 1/222 (0%)
Strand=Plus/Minus
Query 107543 TAAGAGGTTTAAAATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGA 107602
||| |||| |||||||| ||||| || || || | || ||||| ||||| ||| | |
Sbjct 11770868 TAACAGGTC-AAAATGCAGATTTTCGTGAAGACCCTGACCGGCAAGACCATCACCTTGAA 11770810
Query 107603 AACGGAGGCTGGCGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGT 107662
|||| | || || ||| | || || ||||| |||||||| ||| |
Sbjct 11770809 GGTGGAGCCCAATGACACCATCGAGAATGTGAAGGCCAAGATCCAAGATAAAGAGGGCAT 11770750
Query 107663 GCCCGTGGATCAGCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAAT 107722
||| ||||||||||| ||||| | ||| || || |||||||| || | | | || |
Sbjct 11770749 CCCCCACGATCAGCAGAGGCTTATCTTTGCCGGCAAGCAGCTGGAAGATGGCCACACTCT 11770690
Query 107723 GGCGGACTACAACATTCAAAAGGAGTCTACGTTGCACATGGT 107764
| || |||||||| || || ||||| || ||||| ||||
Sbjct 11770689 TTCTGATTACAACATCCAGAAAGAGTCCACCCTGCACCTGGT 11770648
>seq2
Length=40953715
Score = 82.4 bits (90), Expect = 6e-11
Identities = 161/238 (68%), Gaps = 0/238 (0%)
Strand=Plus/Minus
Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615
||||| ||||| || ||||| | || || || |||||||| |||| || |
Sbjct 19232597 ATGCAGATTTTCGTAAAAACCCTTACGGGGAAGACCATTACTCTCGAGGTTGAACCCTCG 19232538
Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675
||||| | | | || || ||||||| || || ||||| | || ||||||
Sbjct 19232537 GATACAATAGAAAATGTGAAGGCAAAGATTCAGGACAAGGAAGGAATTCCTCCTGATCAG 19232478
Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735
|||||||| || | ||| || || || ||||| || | || || | |||||||||
Sbjct 19232477 CAGAGACTGATCTTTGCTGGCAAGCAACTGGAAGATGGACGTACTTTGTCTGACTACAAC 19232418
Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGGAAATAATAAAA 107793
|||||||||||||| || | || | ||||||||| | || || || ||| ||||
Sbjct 19232417 ATTCAAAAGGAGTCCACTCTTCATCTTGTGTTGAGACTTCGTGGTGGTGCTAAGAAAA 19232360
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 398838964416487
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |