Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mustela_20putorius_20furo_20[refseq_20GCF_5F000215625.1_202011-06- 02] 7,783 sequences; 2,410,879,678 total letters Query= NC_024303.1 Length=144898 Score E Sequences producing significant alignments: (Bits) Value seq17 93.3 4e-14 >seq17 Length=19722643 Score = 93.3 bits (102), Expect = 4e-14 Identities = 108/143 (76%), Gaps = 2/143 (1%) Strand=Plus/Minus Query 21125 AGCATTTGGGGGCCTAGCTGCGATGGCTTAGATTGCATTGTTAAGCGGTGTGAACTGCCA 21184 ||||| ||||| || | ||||| ||| | || ||||||| |||| ||||| ||||| Sbjct 7001146 AGCATATGGGGACCAACGTGCGACGGCCTGGACCGCATTGTCGAGCGCTGTGACCTGCCC 7001087 Query 21185 GAGCTTCAAGTGGGCGACTGGCTCATATTTGAAAACATGGGCGCTTACAGCTTGGTCAGC 21244 ||| | || |||||||| ||| | | ||||| ||||||||||| |||| | | |||| Sbjct 7001086 GAGATGCACGTGGGCGATTGGATGGTGTTTGAGAACATGGGCGCCTACACGGTCG-CAGC 7001028 Query 21245 T-CTTCAACCTTTAACGGCTTCC 21266 | |||| || || ||||| |||| Sbjct 7001027 TGCTTCTACTTTCAACGGGTTCC 7001005 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 463500502807440