Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Mustela_20putorius_20furo_20[refseq_20GCF_5F000215625.1_202011-06-
02] 7,783 sequences; 2,410,879,678 total letters
Query= NC_024382.1
Length=137090
Score E
Sequences producing significant alignments: (Bits) Value
seq39 125 6e-24
>seq39
Length=13401118
Score = 125 bits (138), Expect = 6e-24
Identities = 466/713 (65%), Gaps = 78/713 (11%)
Strand=Plus/Minus
Query 1079 CTAGCTTCTGGTCTGAAAAAGAGTAGGTTTCTCTTGAGAGTTAAGGAAGGCATTTTAAAG 1138
|||||||| |||||||||| ||| ||| |||| || | | | ||||||||||||||||
Sbjct 3576022 CTAGCTTCGGGTCTGAAAA-GAGGAGGGTTCTTCTGGGGGCAACGGAAGGCATTTTAAAG 3575964
Query 1139 AAAAGGCTTAGaaaaaaaaTCTGGTGGGCACTTACATATTCTTCCATAAGT---TTTGAA 1195
||| ||| ||| || || |||| || |||| ||||| ||||||| |||| |||||
Sbjct 3575963 AAATGGCCCAGAGAAGAATTCTGTAGGACACTCACATAGTCTTCCAAAAGTCCCTTTGAC 3575904
Query 1196 AATGAGAACTGTAGTTCTGTGATTAC-AGCTGATT----GTATGTCCCGTGGTAGTGGAT 1250
| ||| |||| ||| | || ||||| | | || |||||| || | |
Sbjct 3575903 A-----------AGTGCTGTAATTCCAAGATGATTTTCCGAACATCGCGTGGTTGTAGCT 3575855
Query 1251 ----GGC--------CGTGGGAGGAGAGCAAGGCTCCGGAACAGCAGAGCAGGAACAGGG 1298
||| | ||||||| ||| | | | | |||||||||||||||||||
Sbjct 3575854 GTTGGGCGGGCGCTGCATGGGAGGTCAGCGAAGTTTCCATGCAGCAGAGCAGGAACAGGG 3575795
Query 1299 CAAGCCCTGAAGATTTTGTAAAAATAGAGTAATGCCCACACAC-CCCCACCTGCCCCATA 1357
| || | | | || | ||| ||| | ||||| | || | | ||| | |
Sbjct 3575794 TGAACCTGGCTGGTCCTGGAGAAAGAGAATGATGCCGTGAGACACAGGATCTGACAC-GG 3575736
Query 1358 CCTTAACCTGCCCAAGCTTTCACCACCGAAGCTGTGCCGGACTGAGCCCCATCC--AGTC 1415
||| || |||| |||| |||||||| | | ||||||| | ||| ||||
Sbjct 3575735 CCT--GCCCGCCCCAGCTGCCACCACCG---------CTGGCTGAGCCTC-TCCAGAGTC 3575688
Query 1416 TTTCTCTTTGTCTAGGGAAACTCGACCGCACCCACCAGCATCAATGGCTGTAGGACCTAT 1475
|| | || | ||| ||| || ||| |||| ||| || ||| | ||||||
Sbjct 3575687 TTCCCCTCTTTCTGAGGAGACAAAGCCGTGCCCA-CAG-AT--GGGGCAGCAGGACCCGG 3575632
Query 1476 CGATACCTGAGGGGGATACTATAGCAGGAGAGAGCGAG-GCCGCC-GCTTTGGCAACAGC 1533
| ||||||| | |||| | || || |||||||| | || ||| || | |||| ||||
Sbjct 3575631 CAATACCTGTGTGGGAGAGCATGGCGAGAGAGAGCACGCGCAGCCTGCCTCGGCAGCAGC 3575572
Query 1534 TGCTAGAGTGAGATGTGCTCGCTATACTTTTAGGGAACTGTATATAAAGGGCTAGTTGTA 1593
|| ||| |||||||||||| || | | ||| |||||||||||| | |
Sbjct 3575571 --CTCCAGTCAGATGTGCTCGCCATGGTCCTCAGGA--GATATATAAAGGGCCGCTCACA 3575516
Query 1594 AGGAGG--AGCAC--TAAAAGTACCGCCCACGG-TAAAGTCATTACT-----------CA 1637
|| || ||||| | || || ||||||| || ||| ||||| || ||
Sbjct 3575515 GGGGGGGAAGCACAATCAACGTCCCGCCCATGGCAAAAATCATTGCTCAGTTTTTCTCCA 3575456
Query 1638 GAAAACATTTCAAATTTATGCCATCTGATCTTGGATAAAAGCAAGGCTCGAAGGAA---A 1694
||||||| ||||| || ||| | | |||| | ||| || ||| |||||||
Sbjct 3575455 GAAAACA-CTCAAAATTCTGCGGCCCAAGGTTGGGTGAAATCAGTGCTAGAAGGAAGCGC 3575397
Query 1695 TGAAGTTACCCTTAAGATGGGCAGATGCTTGACGCACTGCATATACACACCGG 1747
||| |||||||| ||| ||||||||||| |||| || | || | |||||| ||
Sbjct 3575396 TGAGGTTACCCTCAAGGTGGGCAGATGCCTGACTCAGTACACACACACACAGG 3575344
Score = 98.7 bits (108), Expect = 9e-16
Identities = 72/84 (86%), Gaps = 0/84 (0%)
Strand=Plus/Minus
Query 171 CACAAGATACAAAACAGGTTATCAGAAAAATTCAGTATAATTTATTAAATAATTTTCAAG 230
||||| || ||||||||||||| ||||||||||| ||||||||||||||||||| | ||
Sbjct 3578018 CACAAAATCCAAAACAGGTTATGAGAAAAATTCAATATAATTTATTAAATAATTCCCGAG 3577959
Query 231 GGCTTCTTTAAGAAGCATTAACAA 254
|| | ||| ||| | |||||||||
Sbjct 3577958 GGTTCCTTCAAGGAACATTAACAA 3577935
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 438517333594000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |