Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mustela_20putorius_20furo_20[refseq_20GCF_5F000215625.1_202011-06- 02] 7,783 sequences; 2,410,879,678 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq65 149 6e-31 seq323 143 3e-29 seq101 132 5e-26 seq50 127 2e-24 seq161 125 7e-24 seq125 122 8e-23 seq2 89.7 5e-13 seq43 87.8 2e-12 seq133 82.4 7e-11 >seq65 Length=10028950 Score = 149 bits (164), Expect = 6e-31 Identities = 158/206 (77%), Gaps = 2/206 (1%) Strand=Plus/Minus Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCT 133515 ||| | ||||||||||||||| || |||||||| | ||| | | | || ||||||| Sbjct 4318159 ATGCAGGGTGGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCA-TCTTCGAGCT 4318101 Query 133516 GCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCT 133575 ||||||| || | || |||| ||||||||| || ||||||||||| ||||| ||||| Sbjct 4318100 GCTTGCCAGCAAAGATAAGCCTCTGCTGGTCAGGGGGGATGCCTTCTTTGTCTTGGATCT 4318041 Query 133576 TTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGG 133635 | | ||| | | |||| ||||| |||||||||| || | |||| ||| ||||||| Sbjct 4318040 TGTCCTTTACATTTTCAATGGTGTCACTGGGCTCCACCTCCAGAGTGATGGTCTTGCCGG 4317981 Query 133636 TCAGAGTTTTTACGAAAATCTGCATG 133661 |||| || || ||||| ||||||||| Sbjct 4317980 TCAGGGTCTTCACGAAGATCTGCATG 4317955 Score = 122 bits (134), Expect = 8e-23 Identities = 148/199 (74%), Gaps = 2/199 (1%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || ||||||||||| || |||||||| | ||| | | | || || ||||||||||| Sbjct 4318380 GTTGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCA-TCTTCTAGCTGCTTGCC 4318322 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 || | || |||| ||||||||| || |||||||| ||||| || |||||| ||| Sbjct 4318321 TGCAAAGATAAGCCTCTGCTGGTCAGGGGGGATGCCCTCCTTATCTTGGATCTTGGCCTT 4318262 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 | | |||| ||||| | |||||||| || | ||||| ||| ||||| ||||| || Sbjct 4318261 TACATTTTCAATGGTGTCACTAGGCTCCACCTCCAGGGTGATGGTCTTGCCAGTCAGGGT 4318202 Query 133643 TTTTACGAAAATCTGCATG 133661 || ||||| ||||||||| Sbjct 4318201 CTTCACGAAGATCTGCATG 4318183 Score = 113 bits (124), Expect = 4e-20 Identities = 118/155 (76%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 133506 TCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTG 133565 || || ||||||||||| || | || |||| ||||||||| || |||||||| || ||| Sbjct 4317675 TCTTCCAGCTGCTTGCCAGCAAAGATAAGCCTCTGCTGGTCAGGGGGGATGCCCTCTTTG 4317616 Query 133566 TCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACG 133625 || |||||| ||| | | || | ||||| |||||||||| || | ||||| | Sbjct 4317615 TCTTGGATCTTGGCCTTCACATTATCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATG 4317556 Query 133626 GTTTTGCCGGTCAGAGTTTTTACGAAAATCTGCAT 133660 || |||| |||||| || || |||||||||||||| Sbjct 4317555 GTCTTGCAGGTCAGGGTCTTCACGAAAATCTGCAT 4317521 >seq323 Length=1159590 Score = 143 bits (158), Expect = 3e-29 Identities = 152/198 (77%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 |||||||||||||| || |||||||| | ||| | | | || || ||||||||||| Sbjct 303423 GTGGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCA-TCTTCCAGCTGCTTGCC 303481 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 || | || |||| |||||||||||| |||||||| ||||| || |||||| ||| Sbjct 303482 AGCAAAGATAAGCCTCTGCTGGTCGGGGGGGATGCCCTCCTTATCTTGGATCTTGGCCTT 303541 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 | | ||| | ||||| |||||||||| || | ||||| ||| ||||||||||| || Sbjct 303542 CACATTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTGCCGGTCAGGGT 303601 Query 133643 TTTTACGAAAATCTGCAT 133660 || |||||||||||||| Sbjct 303602 CTTCACGAAAATCTGCAT 303619 >seq101 Length=7325712 Score = 132 bits (146), Expect = 5e-26 Identities = 150/198 (76%), Gaps = 5/198 (3%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 |||||||||||||| || |||||||| | ||| | | | || || ||||||||||| Sbjct 127827 GTGGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCA-TCTTCCAGCTGCTTGCC 127885 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 || | || |||| |||||||||||| |||||||| || ||||| |||||| ||| Sbjct 127886 AGCAAAGATAAGCCTCTGCTGGTCGGGGGGGATGCCCTCTTTGTCTTGGATCTTGGCCTT 127945 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 | | ||| ||||| || ||||||| || | ||||| ||| ||||||||||| || Sbjct 127946 CACATTCTCG---GTGTCACTGAGCTCCACCTCCAGGGTGATGGTCTTGCCGGTCAGGGT 128002 Query 133643 TTTTACGAAAATCTGCAT 133660 || |||||||||||||| Sbjct 128003 CTTCACGAAAATCTGCAT 128020 Score = 109 bits (120), Expect = 5e-19 Identities = 145/199 (73%), Gaps = 2/199 (1%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 ||||| || ||||| || |||||||| | ||| | | | || || ||||||||||| Sbjct 127599 GTGGATTCGTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCA-TCTTCCAGCTGCTTGCC 127657 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 || | || |||| ||||||||| || |||||||| ||||| || |||||| || Sbjct 127658 AGCAAAGATAAGCCTCTGCTGGTCAGGGGGGATGCCCTCCTTATCTTGGATCTTGGCTTT 127717 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 | | |||| ||||| | |||||||| || | |||| ||| ||||| ||||| || Sbjct 127718 CACATTTTCAATGGTGTCACTAGGCTCCACCTCCAGAGTGATGGTCTTGCCAGTCAGGGT 127777 Query 133643 TTTTACGAAAATCTGCATG 133661 || ||||| ||||||||| Sbjct 127778 CTTCACGAAGATCTGCATG 127796 >seq50 Length=12588045 Score = 127 bits (140), Expect = 2e-24 Identities = 149/199 (75%), Gaps = 2/199 (1%) Strand=Plus/Plus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521 ||||||||||||||| || |||||||| | ||| | | | || || |||||||||| Sbjct 11770659 GGTGGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGTGGCCA-TCTTCCAGCTGCTTGC 11770717 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 | || | || |||| |||||| ||| | |||||||| || || || |||||| || Sbjct 11770718 CGGCAAAGATAAGCCTCTGCTGATCGTGGGGGATGCCCTCTTTATCTTGGATCTTGGCCT 11770777 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 | | | ||| | ||||| |||||||||| | | ||||| ||| ||||||||||| | Sbjct 11770778 TCACATTCTCGATGGTGTCATTGGGCTCCACCTTCAAGGTGATGGTCTTGCCGGTCAGGG 11770837 Query 133642 TTTTTACGAAAATCTGCAT 133660 | || |||||||||||||| Sbjct 11770838 TCTTCACGAAAATCTGCAT 11770856 Score = 113 bits (124), Expect = 4e-20 Identities = 148/201 (74%), Gaps = 3/201 (1%) Strand=Plus/Plus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521 ||||||||||||||| || |||||||| | ||| | | | || || |||||||||| Sbjct 11770430 GGTGGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGTGGCCA-TCTTCCAGCTGCTTGC 11770488 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTC-GGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGC 133580 | || |||| |||| ||||||||| ||| |||||||| || || || |||||| | Sbjct 11770489 CAGCAAAAATAAGCCTCTGCTGGTCAGGGGGGGATGCCCTCTTTATCTTGGATCTTGGCC 11770548 Query 133581 TTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGA 133640 || | | | | ||||| |||||||||| || | ||||| ||| ||||| ||||| Sbjct 11770549 TTCACATTTTTGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTGCCAGTCAGG 11770608 Query 133641 GTTTTTACGAAAATCTGCATG 133661 || || | ||| ||||| ||| Sbjct 11770609 GTCTTCATGAAGATCTGTATG 11770629 Score = 111 bits (122), Expect = 2e-19 Identities = 144/198 (73%), Gaps = 1/198 (1%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCCC 133523 || ||||||||||| || |||||||| | ||| | || || ||||||||||| Sbjct 11770205 GTTGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCAGCCATCTTCTAGCTGCTTGCCG 11770264 Query 133524 GCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTG 133583 || | || |||| ||||||||| | |||||||| || || || |||||| ||| Sbjct 11770265 GCAAAGATAAGCCTCTGCTGGTCACG-GGGATGCCCTCTTTATCTTGGATCTTGGCCTTT 11770323 Query 133584 AGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTT 133643 | | |||| ||||| |||||||||| || | |||| ||| ||||| ||||| || Sbjct 11770324 ACATTTTCAATGGTGTCACTGGGCTCCACCTCCAGAGTGATGGTCTTGCCAGTCAGGGTC 11770383 Query 133644 TTTACGAAAATCTGCATG 133661 || ||||| ||||||||| Sbjct 11770384 TTCACGAAGATCTGCATG 11770401 >seq161 Length=5000004 Score = 125 bits (138), Expect = 7e-24 Identities = 148/198 (75%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || ||||||||||| || |||||||| | ||| | | | || || ||||||||||| Sbjct 410086 GTTGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCA-TCTTCTAGCTGCTTGCC 410028 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 || | || |||| ||||||||| || |||||||| ||||| || |||||| || Sbjct 410027 AGCAAAGATAAGCCTCTGCTGGTCAGGGGGGATGCCCTCCTTATCTTGGATCTTGGCTTT 409968 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 | | || | ||||| |||||||||| || | ||||| ||| ||||||||||| || Sbjct 409967 CACATTTTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTGCCGGTCAGGGT 409908 Query 133643 TTTTACGAAAATCTGCAT 133660 || |||||||||||||| Sbjct 409907 CTTCACGAAAATCTGCAT 409890 Score = 104 bits (114), Expect = 2e-17 Identities = 140/194 (72%), Gaps = 1/194 (1%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCCC 133523 || ||||||||||| || |||||||| | ||| | || || ||||||||||| Sbjct 410313 GTTGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCAGCCATCTTCTAGCTGCTTGCCG 410254 Query 133524 GCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTG 133583 || | || |||| ||||||||| | |||||||| || || || |||||| ||| Sbjct 410253 GCAAAGATAAGCCTCTGCTGGTCACG-GGGATGCCCTCTTTATCTTGGATCTTGGCCTTT 410195 Query 133584 AGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTT 133643 | | |||| ||||| |||||||||| || | |||| ||| ||||| ||||| || Sbjct 410194 ACATTTTCAATGGTGTCACTGGGCTCCACCTCCAGAGTGATGGTCTTGCCAGTCAGGGTC 410135 Query 133644 TTTACGAAAATCTG 133657 || ||||| ||||| Sbjct 410134 TTCACGAAGATCTG 410121 >seq125 Length=6462000 Score = 122 bits (134), Expect = 8e-23 Identities = 150/200 (75%), Gaps = 4/200 (2%) Strand=Plus/Plus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521 || |||||||||||| ||||||| ||| || | | | | | || || ||||| |||| Sbjct 2357458 GGCGGACTCTTTCTGGATATTGTGATCTGACAGAGCGCGGCCA-TCTTCCAGCTGTTTGC 2357516 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGC- 133580 || | |||| || | |||||| || || |||||||| |||||||| ||| ||| || Sbjct 2357517 CCACAAAAATCAGACACTGCTGATCAGGGGGGATGCCCTCCTTGTCTTCGAT-TTTGGCT 2357575 Query 133581 TTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGA 133640 |||| | ||||| |||||| ||||||| || || | ||||| ||| ||||| ||||| Sbjct 2357576 TTGACATTCTCAATGGTGTCGCTGGGCTCAACCTCAAGGGTGATGGTCTTGCCTGTCAGG 2357635 Query 133641 GTTTTTACGAAAATCTGCAT 133660 || || | ||| |||||||| Sbjct 2357636 GTCTTCATGAAGATCTGCAT 2357655 >seq2 Length=40953715 Score = 89.7 bits (98), Expect = 5e-13 Identities = 140/198 (71%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 |||||||| || || || ||||| || || || | | | || || || |||||||| Sbjct 19232401 GTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTACGTCCA-TCTTCCAGTTGCTTGCC 19232459 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 || | || || | |||||| || ||||| || ||||||||||| |||||| ||| Sbjct 19232460 AGCAAAGATCAGTCTCTGCTGATCAGGAGGAATTCCTTCCTTGTCCTGAATCTTTGCCTT 19232519 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 | | || | || || | ||| || || |||| || | ||| || || || || || Sbjct 19232520 CACATTTTCTATTGTATCCGAGGGTTCAACCTCGAGAGTAATGGTCTTCCCCGTAAGGGT 19232579 Query 133643 TTTTACGAAAATCTGCAT 133660 |||||||||||||||||| Sbjct 19232580 TTTTACGAAAATCTGCAT 19232597 >seq43 Length=13120276 Score = 87.8 bits (96), Expect = 2e-12 Identities = 140/197 (71%), Gaps = 3/197 (2%) Strand=Plus/Minus Query 133465 TGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCCCG 133524 ||||||||||| | ||||||||||| || ||| || || ||| ||||||| Sbjct 1400569 TGGACTCTTTCCGGATATTGTAATCTGACAGAGTGCTGCCATCTTCTCACTGTTTGCCCG 1400510 Query 133525 CGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGC-TTG 133583 | |||| || |||||| ||| | ||||| || |||||||| ||| ||| || ||| Sbjct 1400509 CTAAAATCAGATGCTGCT-GTCAAG-GGGATCCCCTCCTTGTCTTGGATTTTTGGCTTTG 1400452 Query 133584 AGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTT 133643 | | |||| ||||| |||| || | | || ||||| ||| |||| |||| ||| Sbjct 1400451 ACATTCTCAGTGGTGTCACTGGGGTCAAACTTGAGGGTGATGGTCCTGCCCATCAGGGTT 1400392 Query 133644 TTTACGAAAATCTGCAT 133660 || ||||| |||||||| Sbjct 1400391 TTCACGAAGATCTGCAT 1400375 >seq133 Length=6340249 Score = 82.4 bits (90), Expect = 7e-11 Identities = 77/98 (79%), Gaps = 0/98 (0%) Strand=Plus/Minus Query 148866 TACTCTACGATCTCGGCGCACAGATTGCTGCATTTGATCACGCCCACGTTCTTTTGATTG 148925 |||||||| || || | |||||| |||||||||||||| |||| ||||| || ||| Sbjct 5009179 TACTCTACTATTTCTGTGCACAGGTTGCTGCATTTGATTGTTCCCAGGTTCTGCTGGTTG 5009120 Query 148926 CTCTTGCTGTTGCACGCGTCCTTGTACAGCATGTACGG 148963 ||||| | || || | ||| ||||| ||||||||||| Sbjct 5009119 CTCTTCCGATTACAGGAGTCTTTGTAAAGCATGTACGG 5009082 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483373769198920