Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Mustela_20putorius_20furo_20[refseq_20GCF_5F000215625.1_202011-06-
02] 7,783 sequences; 2,410,879,678 total letters
Query= NC_024696.1
Length=180800
Score E
Sequences producing significant alignments: (Bits) Value
seq171 293 3e-74
seq81 188 8e-43
seq129 141 1e-28
>seq171
Length=4644964
Score = 293 bits (324), Expect = 3e-74
Identities = 629/934 (67%), Gaps = 21/934 (2%)
Strand=Plus/Minus
Query 162059 CCAGGGACTTATGTCGGAGATACTCGTCTAGACACTGGACCGCGAACACGTCTCGTTCCT 162118
||| || ||||| | || | ||| || | |||||||| || || | ||| |||
Sbjct 1298526 CCAAGGCTTTATGCCTCAGGTGCTCATCCAAACACTGGATGGCAAAGAGGTCAACGTCCG 1298467
Query 162119 CATCGAACTTGTTCGCGAACAGGTGATGCGAGTTCTTCAATATCCAATTAAGATCCCCCG 162178
||||||||||| || |||| ||| ||| || | ||||| || | || || |
Sbjct 1298466 TGTCGAACTTGTTGGCAAACAAGTGGTGC---TTGCGGAGCATCCAGTTCAAGTCACCTG 1298410
Query 162179 ATCCGAACACGCACACGGACCGCACGTGCACGCCGCTGCACGGCGGATACAGGGCCCCAT 162238
||||||||||||||||| |||||||| ||||| ||||| || || || |||| || |
Sbjct 1298409 CCCCGAACACGCACACGGAACGCACGTGGACGCCACTGCAGGGTGGGTAGGGGGCACCCT 1298350
Query 162239 CGTCCACATCCCCCTCGTAGTATTGCCACTTAACGAACCTAGTGATAGCCTGCATGTCGG 162298
| ||||| |||||| |||| |||||||| || ||||| | || || |||||||| |
Sbjct 1298349 TGGAAACATCACCCTCGAAGTACTGCCACTTGACAAACCTCGCAATCGCGTGCATGTCAG 1298290
Query 162299 AGGTGTCGTACTTGTACACTGACGGCACGGCTCCAGGAACACCCGGCAGTCTCTGTAGAG 162358
| |||||||||| | | | | || || || || ||| | || | ||||| | |
Sbjct 1298289 ACATGTCGTACTTCTGGCTTAAGGACAGGGAGCCTGGGACATCTGGGATCCTCTGAATGG 1298230
Query 162359 TAGCCCACAGGTGTTCGTCTGGACTATACGTCTCCTTCGACCACTCCATGAACTCCCTGA 162418
| ||||| || | || || || || || || || || | ||||||||| |||| ||
Sbjct 1298229 TGGCCCAGAGATACTCATCGGGGCTGTAGGTGTCTTTTGCCCACTCCATAAACTTTTGGA 1298170
Query 162419 CCGTTTTATCGTA---TAGAATGTAAGAGACGTAGGACCTGGTCACAATAAAGTACGCGC 162475
|||| |||| ||| | || ||||| ||| | || | ||| || || |
Sbjct 1298169 ---TTTTTTCGTTCTCTAGCACATACTCCACGTACTTCCTACTGACCACAAAATAGGCAC 1298113
Query 162476 TACCAGAAAACACGGGTATGCGTATAGGAGGGGGCTC---TTTGTCTTGACCCGTGTTGA 162532
| || || |||| ||| | | | ||||||||| |||||| || |||||
Sbjct 1298112 TGCCTGAGAACAGGGGAGT---TTCAAGAGGGGGCTGCATTTTGTCGGTCCCTGTGTTCG 1298056
Query 162533 CTACCATTCCCTCTACGACCACGTGTCTCTTCCTCCACCTGGCCATCTTACTGGTAGACG 162592
| | |||| | || ||| | ||| ||||||| | | || ||| | |
Sbjct 1298055 TCAGCTTTCCGTTAACAACCGTATAATGCTTTTTCCACCTTTCTTTTTTGTTGGATGGCA 1297996
Query 162593 GGTGTTCGGTCTCTAGACTGTTACGACCCCCCAAGGCCTTCAGCTGACGCACCATCTCTA 162652
||||| ||||| |||| |||| | | ||| |||| || || || || |
Sbjct 1297995 TCCTCTCGGTTTCTAGGTTGTTTTCACCCATTAGTGACTTGAGCTTCCGGACAATTTCCA 1297936
Query 162653 GATTGGTCTTAAGGGGAAAGTCGGTGCCGCAGAGATTAATAACATATTTCCACTTAACGC 162712
||||| |||| ||||| || | ||||||||||| || | || ||||| | | |
Sbjct 1297935 AGTTGGTTTTAATAGGAAAATCCATACCGCAGAGATTTATCAAGTACTTCCAGTCTGCCC 1297876
Query 162713 TGAGTCCGTACAGATCCTGTAGACAGTTCAGATCGGCCTGGACGCGACTCCACGACGCGT 162772
| | | ||| || ||||| | ||||| || |||||||| || || |||||||| ||||
Sbjct 1297875 TCATCCTGTAGAGGTCCTGCATGCAGTTGAGGTCGGCCTGAACCCGGCTCCACGAGGCGT 1297816
Query 162773 ACACGACGCTCTCCAACCTAGTGGCGACAAAGACATTGTCGAAACACGAAACTATCCCCA 162832
|||| || ||||||| | | |||| || |||||||| ||| || || | || ||||
Sbjct 1297815 ACACCACACTCTCCAGCTGACTGGCCACGAAGACATTACTGAAGCAGGACGCGATGCCCA 1297756
Query 162833 TCA---CGGCCAGTGAGAACATCGGGTCCGCTTTCCTATCTACGTGTACGCAGTATAGAT 162889
|| |||||| || | ||| || | ||| || || ||||| | |||||| | ||
Sbjct 1297755 GCACCGCGGCCAAGAAGGA-ATC--CTCTGATTTTCTGTCCACGTGAATGCAGTAGAAAT 1297699
Query 162890 TCTGAGGGGCGTAGATGGCCCTCAGTAATCTCTCGAACATCTCTATCTTATGGTGTACCA 162949
|||| || ||||||||||||||||| | || || | ||| || || || || || ||||
Sbjct 1297698 TCTGGGGCGCGTAGATGGCCCTCAGGAGCCTGTCAAGCATTTCAATTTTGTGATGGACCA 1297639
Query 162950 CGATAGAATACGCTATGGGGAACTCAGCCTCCTC 162983
| |||||||| || ||||| || || ||||| ||
Sbjct 1297638 CTATAGAATATGCGATGGGAAATTCTGCCTCTTC 1297605
>seq81
Length=8639600
Score = 188 bits (208), Expect = 8e-43
Identities = 218/294 (74%), Gaps = 0/294 (0%)
Strand=Plus/Plus
Query 171771 CATAGAGTGTCAGACAGGTCTTACCCGATATTTTTCCGGACCCAAAAGTATTAAACAAAC 171830
|| |||| || || |||| | || || || || || || ||||||||||| || | |
Sbjct 6611946 CAGAGAGGGTGAGGCAGGCTATTCCTGAGATCTTCCCAGAACCAAAAGTATTGAAGAGGC 6612005
Query 171831 ACATAAAACAGCCTTCGTCCTCCACGGTGGTGTTCCAAAAAGTCAATGTAGAATTTCTGA 171890
|| | |||| ||||| ||||||| |||||| ||||| || || | || || || |||
Sbjct 6612006 ACTTGTAACACCCTTCATCCTCCAGGGTGGTATTCCAGAACGTGATGGTTGAGTTCTTGA 6612065
Query 171891 GTCCGAGTTGCGTAATGTTCACCCGGTCCTTGTACGGAGGCTGGACGACAACACCGTGAT 171950
|| | || | || ||||| | | |||||| || | |||||||| ||||| || || |
Sbjct 6612066 GTTCCAGCTCAGTGATGTTTATCTTGTCCTTATAGGCGGGCTGGACCACAACCCCATGGT 6612125
Query 171951 TCTCGCTGAACGTGGCCATGTTTTCGGGGCTCGTAGCCTTTATCTTCTGCCACGTTACTA 172010
||| |||||| ||| |||||||||| ||||| || ||| || |||||||| || || |
Sbjct 6612126 TCTTGCTGAAGGTGACCATGTTTTCTGGGCTAACAGGCTTGATTTTCTGCCATGTCACAA 6612185
Query 172011 TTAAAACTTCTTTGTCGGTTTGAAGAGAGCATCTTAAAGAAGCAGGTGTGTTCA 172064
| || ||||| | |||| |||||||||||||| ||||||||||||||||
Sbjct 6612186 TCAAGACTTCCTCAGAATTTTGCAGAGAGCATCTTAAGGAAGCAGGTGTGTTCA 6612239
Score = 109 bits (120), Expect = 6e-19
Identities = 176/251 (70%), Gaps = 9/251 (4%)
Strand=Plus/Plus
Query 171503 ACAGTTTGTCTGATGTCTGTTACAGTCCCCAAGTGTAAGACTTTGCATATCACCTCCTCG 171562
|||||||| ||| | || || |||||| ||| | || | ||| | ||||||||
Sbjct 6609262 ACAGTTTGCGTGACGCTGGTCACGTTCCCCAGGTGAAGCACCTGGCAGACCACCTCCT-- 6609319
Query 171563 TTTCCCACTTGACTTTTAGGATCTTTTACTTGAAGAATGCTAGTAACAGATGTAGTCCCG 171622
| ||||| ||||| || || ||||| || ||||| | ||| || |||||||| |||||
Sbjct 6609320 -TCCCCACCTGACTCTTGGGGTCTTTGACCTGAAGGACGCTCGTGACAGATGTGGTCCCA 6609378
Query 171623 TTACGATGT---AGAACGGTTTTAGTACTATTTTCTATTCCGGATCCGGCAACTTTCCAA 171679
|| | || ||||| | |||||| || || || || || || | || |||||
Sbjct 6609379 TTGGGGTGGGAGAGAACC---TCAGTACTGTTGTCAATCCCTGACCCAGACACCTTCCAG 6609435
Query 171680 AATATAACAGGAGCTGGTCTAGCAGTAGCAGAGCAAGTTATGTTTAATCCATCTTCGAAG 171739
| || ||||| ||||| | ||| | ||||||||||| || || | |||||||||
Sbjct 6609436 GAGATCACAGGGGCTGGGCGGGCATTGGCAGAGCAAGTGATATTCAGGTGGTCTTCGAAG 6609495
Query 171740 AACTCATAGTG 171750
|| | ||||||
Sbjct 6609496 AATTTATAGTG 6609506
>seq129
Length=6421872
Score = 141 bits (156), Expect = 1e-28
Identities = 396/594 (67%), Gaps = 19/594 (3%)
Strand=Plus/Minus
Query 176887 TCCAGTTAAAGTATTGAAGATAAAGGGTGACGTTTTTATCGATGGCGTTGAGGTGCGAGG 176946
||||||||||||| ||| || | | |||||| || | | || || | | ||
Sbjct 700686 TCCAGTTAAAGTAACTAAGGTATAACTTATTGTTTTTGTCAACTTCTTTCAGATACTTGG 700627
Query 176947 CCAGTTCTATAGGGGACGTGTAGTCGTTCACGTGAATGAAAGCGTCTCCCGGGACGTAAT 177006
| || || | || || | || || | ||| |||||||| | ||| | || | ||||
Sbjct 700626 CTAGCTCACTGGGAGAGTTATAATCTTCCACATGAATGAATGAATCTGCTGGAATATAAT 700567
Query 177007 TTTCGTAATTCTCTCTCGATGTTCCGAGTACTATGGGTACCGCACCTGCCATAAGAGATC 177066
| || ||||| || || |||| || || || | ||||| | || || | || ||
Sbjct 700566 TCTCATAATTTTCCCTAGATGGCCCCAGAACAACAGGTACAGAGCCAGCTAAAAAAGCAT 700507
Query 177067 GGTAGAGTTTTTCGGTAATATAGTCCCTGTGTACGGAGTTCTCAAACGCGAGATAGAATT 177126
||||| ||||| || || || || |||| | ||||| ||||| | ||||||||||
Sbjct 700506 TATAGAGCTTTTCTGTGATGTAATCTTTGTGGATTGAGTTTTCAAAAGAAAGATAGAATT 700447
Query 177127 TACAGGAAGATA--GTAGCGGGATGAAGTCATCATCGGGTATATAATCTCCTACTACGTT 177184
| || | ||||| ||| || || || | | ||| | ||| ||||| | | | |
Sbjct 700446 TGCAAGTAGATATGGTA--GGAATCAAATTTTTATCATTCACATACTCTCCAAATGCTTG 700389
Query 177185 CCCGTATACATGTATATCTATGTGTTTACTGAGCTCTAGGTAGTATCTCGA-TCTCACGT 177243
||| || ||| || || ||| ||| || ||||| ||| || || || || |||
Sbjct 700388 CCCATACGTATGGATTTCAATGCTTTTGCTTAGCTCATTGTAATA-CTTGACCCTGGCGT 700330
Query 177244 GGTCGTTGTTCCAATTGCTGACGACCCAGCAAACTAACTTGCTCTTTGC-GGGAACGGGA 177302
| || |||||| || || || |||||||| |||||||| |||||||| || ||
Sbjct 700329 GCTCAGGGTTCCAGTTACTTACAACCCAGCACACTAACTT-CTCTTTGCTTGGCAC---- 700275
Query 177303 TTC-GATACTAATGCAGTGTCT-CTGAGCGTTAGTGATCCATAGGGCACGTGAATATCCG 177360
||| | || || | || | | || | ||| | | || || ||||| || ||||| |
Sbjct 700274 TTCAAACACGAA-GGGGTTTGTGCTCACCGTCAAGAAGCCGTAAGGCACTTGGATATCTG 700216
Query 177361 AGTCGCGTCTGTACGTTAACGTGAGATTGAAAAGGTTTTCTATAC--CTTGTTTGAAGGG 177418
||||||| | ||| || | || | ||||| |||| || || | ||| |||| |||
Sbjct 700215 AGTCGCGGCGGTAAGTCAGAGTCAAGTTGAACAGGTGCTCAATGCCACTTTTTTG--GGG 700158
Query 177419 GCTGTTACTGGGCGATTCTAAGTTCATCCATATCCACTTTTGAAAGGTTGGTCT 177472
||| | | || ||||| || |||||||| ||||| || || |||| ||| ||
Sbjct 700157 CGTGTGAGTTGGTGATTCCAAATTCATCCAAATCCATTTCTGGAAGGGTGGCCT 700104
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 578375725796800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |