Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Mustela_20putorius_20furo_20[refseq_20GCF_5F000215625.1_202011-06-
02] 7,783 sequences; 2,410,879,678 total letters
Query= NC_025257.1
Length=102759
Score E
Sequences producing significant alignments: (Bits) Value
seq125 89.7 3e-13
seq65 89.7 3e-13
seq39 86.0 4e-12
seq101 84.2 1e-11
>seq125
Length=6462000
Score = 89.7 bits (98), Expect = 3e-13
Identities = 137/193 (71%), Gaps = 2/193 (1%)
Strand=Plus/Plus
Query 33558 CTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAA 33617
|||||| || || |||| ||| || || | ||| | || |||| ||||| || ||||
Sbjct 2357464 CTCTTTCTGGATATTGTGATCTGACAGAGCGCGGCCATCTTCCAGCTGTTTGCCCACAAA 2357523
Query 33618 AATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACAT 33677
||||| || ||||||||| | || | || || ||||| | ||||| ||| | |||
Sbjct 2357524 AATCAGACACTGCTGATCAGGGGGGATGCCCTCCTTGTCTTCGATTTTGGCTTTGA-CAT 2357582
Query 33678 AGTCAC-GGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTA 33736
||| ||||||||| | || || |||| ||||| || || ||||| | || || |
Sbjct 2357583 TCTCAATGGTGTCGCTGGGCTCAACCTCAAGGGTGATGGTCTTGCCTGTCAGGGTCTTCA 2357642
Query 33737 CAAAGATCTGCAT 33749
|||||||||||
Sbjct 2357643 TGAAGATCTGCAT 2357655
>seq65
Length=10028950
Score = 89.7 bits (98), Expect = 3e-13
Identities = 158/228 (69%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582
||||| |||| || | |||| ||| || ||| |||||| || ||||||||||| ||
Sbjct 4318182 CCACCCCTCAGGCGCAGGACCAGATGCAGGGTGGACTCTTTCTGGATGTTGTAATCAGAA 4318123
Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642
|| ||||| | || || | || || || ||||| || | | |||||| || | ||
Sbjct 4318122 AGAGTGCGGCCATCTTCGAGCTGCTTGCCAGCAAAGATAAGCCTCTGCTGGTCAGGGGGG 4318063
Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701
| ||||||||||| || || | || |||| || | |||||| || | |||||
Sbjct 4318062 ATGCCTTCTTTGTCTTGGATCTTGTCCTT-TACATTTTCAATGGTGTCACTGGGCTCCAC 4318004
Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749
|| | ||||| || || || || | || || || |||||||||||
Sbjct 4318003 CTCCAGAGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 4317956
>seq39
Length=13401118
Score = 86.0 bits (94), Expect = 4e-12
Identities = 159/231 (69%), Gaps = 2/231 (1%)
Strand=Plus/Minus
Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582
|| ||||| | || | |||| || ||||| ||| || || |||||||| |||||
Sbjct 1513510 CCCCCTCTGAGGCGGAGGACCAGGTGCAGAGTCGACTCCTTCTGGATGTTGTAGTCGGAC 1513451
Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642
|| ||||| | || |||| ||||| || ||||| ||||| | |||||| || | ||
Sbjct 1513450 AGGGTGCGCCCATCCTCCAGCTGTTTCCCAGCAAAGATCAACCTCTGCTGGTCAGGGGGG 1513391
Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701
| || || ||||| || ||| || | | | || | |||||| || | |||||
Sbjct 1513390 ATGCCCTCCTTGTCCTGGATCTTCGCCTTGA-CGTTCTCGATGGTGTCACTGGGCTCCAC 1513332
Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATAGT 33752
|| | ||||| || ||||| || | || || || ||||||||||| ||
Sbjct 1513331 CTCCAGGGTGATGGTCTTACCCGTCAGGGTCTTCACGAAGATCTGCATTGT 1513281
>seq101
Length=7325712
Score = 84.2 bits (92), Expect = 1e-11
Identities = 156/227 (69%), Gaps = 3/227 (1%)
Strand=Plus/Plus
Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582
||||| |||| || | |||| || |||||| |||||| || ||||||||||| ||
Sbjct 127797 CCACCCCTCAGGCGCAGGACCAGGTGCAGAGTGGACTCTTTCTGGATGTTGTAATCAGAA 127856
Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642
|| ||||| | || |||| || || || ||||| || | | |||||| || | ||
Sbjct 127857 AGAGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATAAGCCTCTGCTGGTCGGGGGGG 127916
Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTCACGGTGTCGCTTGATTCCACG 33702
| || |||||||| || || ||| |||| || ||||||| || |||||
Sbjct 127917 ATGCCCTCTTTGTCTTGGATCTTGGCCTTC-ACAT--TCTCGGTGTCACTGAGCTCCACC 127973
Query 33703 TCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749
|| | ||||| || || || || | || || || || ||||||||
Sbjct 127974 TCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAAATCTGCAT 128020
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 328672820679360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |