Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mustela_20putorius_20furo_20[refseq_20GCF_5F000215625.1_202011-06- 02] 7,783 sequences; 2,410,879,678 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq2 129 1e-24 seq161 109 1e-18 seq50 109 1e-18 seq65 107 5e-18 seq101 104 6e-17 seq323 98.7 2e-15 seq237 91.5 3e-13 seq32 84.2 5e-11 >seq2 Length=40953715 Score = 129 bits (142), Expect = 1e-24 Identities = 152/206 (74%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 ||||| || || || || || || ||| | || || ||| || || ||| | ||| Sbjct 19232582 AAAACCCTTACGGGGAAGACCATTACTCTCGAGGTTGAACCCTCGGATACAATAGAAAAT 19232523 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 || ||| ||||||||| || || ||||||||| || || || ||||| ||||| Sbjct 19232522 GTGAAGGCAAAGATTCAGGACAAGGAAGGAATTCCTCCTGATCAGCAGAGACTGATCTTT 19232463 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 || || ||||| ||||||||||| | |||||| | || |||||| | || || ||||| Sbjct 19232462 GCTGGCAAGCAACTGGAAGATGGACGTACTTTGTCTGACTACAACATTCAAAAGGAGTCC 19232403 Query 206365 ACTCTTCACCTTGTTTTGAGACTTCG 206390 |||||||| ||||| ||||||||||| Sbjct 19232402 ACTCTTCATCTTGTGTTGAGACTTCG 19232377 Score = 95.1 bits (104), Expect = 3e-14 Identities = 78/95 (82%), Gaps = 0/95 (0%) Strand=Plus/Plus Query 204752 CGAAGTCTCAAAACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTC 204811 ||||||||||| ||||| |||||||| ||||| || || | || ||||||| |||||| Sbjct 19232377 CGAAGTCTCAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTA 19232436 Query 204812 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATAAG 204846 | |||||||||||| ||||| || || ||||| || Sbjct 19232437 CGTCCATCTTCCAGTTGCTTGCCAGCAAAGATCAG 19232471 >seq161 Length=5000004 Score = 109 bits (120), Expect = 1e-18 Identities = 143/196 (73%), Gaps = 3/196 (2%) Strand=Plus/Plus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 || || || || || || || |||||| |||| ||||| |||||| | ||| Sbjct 410133 AAGACCCTGACTGGCAAGACCATCACTCTGGAGGTGGAGCCCAGTGACACCATTGAAAAT 410192 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCG-GACGCTCAAAGACTTATCTT 206303 |||||| ||||| ||||| ||||| || || ||| ||| || || |||||||| Sbjct 410193 GTAAAGGCCAAGATCCAAGATAAAGAGGGCATCC--CCGTGACCAGCAGAGGCTTATCTT 410250 Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363 ||||| |||||| | |||||||| | ||| | | ||||||||| ||||||||||||| Sbjct 410251 TGCCGGCAAGCAGCTAGAAGATGGCTGCACTCTTTCTGATTACAACATCCAGAAAGAGTC 410310 Query 206364 TACTCTTCACCTTGTT 206379 ||||| ||||| ||| Sbjct 410311 AACTCTCCACCTGGTT 410326 Score = 98.7 bits (108), Expect = 2e-15 Identities = 141/196 (72%), Gaps = 2/196 (1%) Strand=Plus/Plus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 || || || || || || || ||||| |||| ||||| |||||| ||||| Sbjct 409905 AAGACCCTGACCGGCAAGACCATCACCCTGGAGGTGGAGCCCAGTGACACCATCGAAAAT 409964 Query 206245 GT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303 || ||||| || ||| ||||| || || || || || ||| || || |||||||| Sbjct 409965 GTGAAAGCCAA-GATCCAAGATAAGGAGGGCATCCCCCCTGACCAGCAGAGGCTTATCTT 410023 Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363 || || |||||| | |||||||| | ||| | | ||||||||| ||||||||||||| Sbjct 410024 TGCTGGCAAGCAGCTAGAAGATGGCCGCACTCTTTCTGATTACAACATCCAGAAAGAGTC 410083 Query 206364 TACTCTTCACCTTGTT 206379 ||||| ||||| ||| Sbjct 410084 AACTCTCCACCTGGTT 410099 Score = 84.2 bits (92), Expect = 5e-11 Identities = 70/86 (81%), Gaps = 0/86 (0%) Strand=Plus/Minus Query 204763 AACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTCCTTCCATCTTC 204822 ||| ||||| ||||| ||||||||||||| || || |||| | ||| | |||||||| Sbjct 410326 AACCAGGTGGAGAGTTGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCAGCCATCTTC 410267 Query 204823 CAGCTGCTTTCCGGCGAAGATAAGCC 204848 |||||||| ||||| |||||||||| Sbjct 410266 TAGCTGCTTGCCGGCAAAGATAAGCC 410241 >seq50 Length=12588045 Score = 109 bits (120), Expect = 1e-18 Identities = 143/196 (73%), Gaps = 3/196 (2%) Strand=Plus/Minus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 || || || || || || || |||||| |||| ||||| |||||| | ||| Sbjct 11770385 AAGACCCTGACTGGCAAGACCATCACTCTGGAGGTGGAGCCCAGTGACACCATTGAAAAT 11770326 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCG-GACGCTCAAAGACTTATCTT 206303 |||||| ||||| ||||| ||||| || || ||| ||| || || |||||||| Sbjct 11770325 GTAAAGGCCAAGATCCAAGATAAAGAGGGCATCC--CCGTGACCAGCAGAGGCTTATCTT 11770268 Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363 ||||| |||||| | |||||||| | ||| | | ||||||||| ||||||||||||| Sbjct 11770267 TGCCGGCAAGCAGCTAGAAGATGGCTGCACTCTTTCTGATTACAACATCCAGAAAGAGTC 11770208 Query 206364 TACTCTTCACCTTGTT 206379 ||||| ||||| ||| Sbjct 11770207 AACTCTCCACCTGGTT 11770192 Score = 91.5 bits (100), Expect = 3e-13 Identities = 139/197 (71%), Gaps = 6/197 (3%) Strand=Plus/Minus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 || || || || || || || ||||| ||| | ||||| |||||| |||| Sbjct 11770841 AAGACCCTGACCGGCAAGACCATCACCTTGAAGGTGGAGCCCAATGACACCATCGAGAAT 11770782 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA---AGACTTATC 206301 || ||| ||||| ||||| ||||| || || || ||| ||| || |||||| Sbjct 11770781 GTGAAGGCCAAGATCCAAGATAAAGAGGGCATC---CCCCACGATCAGCAGAGGCTTATC 11770725 Query 206302 TTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAG 206361 || ||||| |||||| |||||||||| ||| | | ||||||||| ||||||||||| Sbjct 11770724 TTTGCCGGCAAGCAGCTGGAAGATGGCCACACTCTTTCTGATTACAACATCCAGAAAGAG 11770665 Query 206362 TCTACTCTTCACCTTGT 206378 || || || ||||| || Sbjct 11770664 TCCACCCTGCACCTGGT 11770648 Score = 84.2 bits (92), Expect = 5e-11 Identities = 70/86 (81%), Gaps = 0/86 (0%) Strand=Plus/Plus Query 204763 AACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTCCTTCCATCTTC 204822 ||| ||||| ||||| ||||||||||||| || || |||| | ||| | |||||||| Sbjct 11770192 AACCAGGTGGAGAGTTGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCAGCCATCTTC 11770251 Query 204823 CAGCTGCTTTCCGGCGAAGATAAGCC 204848 |||||||| ||||| |||||||||| Sbjct 11770252 TAGCTGCTTGCCGGCAAAGATAAGCC 11770277 >seq65 Length=10028950 Score = 107 bits (118), Expect = 5e-18 Identities = 140/194 (72%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 || || || || || || || |||||| |||| ||||| |||||| | ||| Sbjct 4317971 AAGACCCTGACCGGCAAGACCATCACTCTGGAGGTGGAGCCCAGTGACACCATTGAAAAT 4318030 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 |||||| | ||||| ||||| |||||||| || || ||| || || |||||||| Sbjct 4318031 GTAAAGGACAAGATCCAAGACAAAGAAGGCATCCCCCCTGACCAGCAGAGGCTTATCTTT 4318090 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 || || |||||| | |||||||| | ||| | | ||||||||| ||||||||||||| Sbjct 4318091 GCTGGCAAGCAGCTCGAAGATGGCCGCACTCTTTCTGATTACAACATCCAGAAAGAGTCC 4318150 Query 206365 ACTCTTCACCTTGT 206378 || || || || || Sbjct 4318151 ACCCTGCATCTGGT 4318164 Score = 104 bits (114), Expect = 6e-17 Identities = 140/195 (72%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 || || || || || || || ||||| |||| ||||| | |||||| | ||| Sbjct 4318199 AAGACCCTGACTGGCAAGACCATCACCCTGGAGGTGGAGCCTAGTGACACCATTGAAAAT 4318258 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 |||||| ||||| ||||| || || || || || ||| || || |||||||| Sbjct 4318259 GTAAAGGCCAAGATCCAAGATAAGGAGGGCATCCCCCCTGACCAGCAGAGGCTTATCTTT 4318318 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 || || |||||| | |||||||| | ||| | | ||||||||| ||||||||||||| Sbjct 4318319 GCAGGCAAGCAGCTAGAAGATGGCCGCACTCTTTCTGATTACAACATCCAGAAAGAGTCA 4318378 Query 206365 ACTCTTCACCTTGTT 206379 ||||| ||||| ||| Sbjct 4318379 ACTCTCCACCTGGTT 4318393 >seq101 Length=7325712 Score = 104 bits (114), Expect = 6e-17 Identities = 143/196 (73%), Gaps = 7/196 (4%) Strand=Plus/Minus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTC--TGACACAGTCGAAT 206242 || || || || || || || ||||| |||| ||||| | || |||||| | |||| Sbjct 128005 AAGACCCTGACCGGCAAGACCATCACCCTGGAGGTGGA--GCTCAGTGACACCGA-GAAT 127949 Query 206243 CAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCT 206302 || ||| ||||| ||||| ||||| || || || ||| || || ||||||| Sbjct 127948 --GTGAAGGCCAAGATCCAAGACAAAGAGGGCATCCCCCCCGACCAGCAGAGGCTTATCT 127891 Query 206303 TCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGT 206362 | || || |||||| |||||||||| | ||| | | ||||||||| |||||||||||| Sbjct 127890 TTGCTGGCAAGCAGCTGGAAGATGGCCGCACTCTTTCTGATTACAACATCCAGAAAGAGT 127831 Query 206363 CTACTCTTCACCTTGT 206378 | ||||| ||||| || Sbjct 127830 CCACTCTGCACCTGGT 127815 >seq323 Length=1159590 Score = 98.7 bits (108), Expect = 2e-15 Identities = 138/194 (71%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 || || || || || || || ||||| |||| ||||| |||||| |||| Sbjct 303604 AAGACCCTGACCGGCAAGACCATCACCCTGGAGGTGGAGCCCAGTGACACCATCGAGAAT 303545 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 || ||| ||||| ||||| || || || || || ||| || || |||||||| Sbjct 303544 GTGAAGGCCAAGATCCAAGATAAGGAGGGCATCCCCCCCGACCAGCAGAGGCTTATCTTT 303485 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 || || |||||| |||||||||| | ||| | | ||||||||| ||||||||||||| Sbjct 303484 GCTGGCAAGCAGCTGGAAGATGGCCGCACTCTTTCTGATTACAACATCCAGAAAGAGTCC 303425 Query 206365 ACTCTTCACCTTGT 206378 ||||| ||||| || Sbjct 303424 ACTCTGCACCTGGT 303411 >seq237 Length=2526385 Score = 91.5 bits (100), Expect = 3e-13 Identities = 139/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 || || || || || || || ||||| |||| ||||| |||||| |||| Sbjct 2104010 AAGACCCTGACGGGTAAGACCATCACCCTGGAGGTGGAGCCCAGTGACACCATCGAGAAT 2103951 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 || || ||||||||||| ||||| || || || ||| || || | ||||| Sbjct 2103950 GTGAAAGGGAAGATTCAAGAGAAAGAGGGCATCCCCCCTGACCAGCAGAGGTTGATCTTT 2103891 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 ||||| || ||| |||| ||||| | || || |||| |||||| ||||||| ||||| Sbjct 2103890 GCCGGGAAACAGCTGGAGGATGGGCGCACCCTGTCCGACTACAACATCCAGAAGGAGTCC 2103831 Query 206365 ACTCTTCACCTTGTTTTG 206382 ||||||||||| ||| || Sbjct 2103830 ACTCTTCACCTGGTTCTG 2103813 >seq32 Length=14820502 Score = 84.2 bits (92), Expect = 5e-11 Identities = 135/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 ||||| || ||||| || || |||||| | | || ||| | || ||| | ||| Sbjct 8777201 AAAACCCTTACAGGGAAGACCATCACTCTCAAGGTTGAACCCTTAGATACAATAGAAGAT 8777142 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 || ||| |||||||| || || ||||||||| || || || |||| ||||| Sbjct 8777141 GTGAAGGCCAAGATTCAGGATAAGGAAGGAATTCCTCCTGATCAGCAGAGACCGATCTTT 8777082 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 || || |||| |||||||||||| ||| || | | |||||| | || || |||||| Sbjct 8777081 GCTGGCAAGCTATTGGAAGATGGACATACTCTGCCTGGTTACAATGCTCAAAAGGAGTCT 8777022 Query 206365 ACTCTTCACCTTGT 206378 ||||||| |||| Sbjct 8777021 GCTCTTCATTTTGT 8777008 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181702949199143