Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Mustela_20putorius_20furo_20[refseq_20GCF_5F000215625.1_202011-06-
02] 7,783 sequences; 2,410,879,678 total letters
Query= NC_025960.1
Length=148981
Score E
Sequences producing significant alignments: (Bits) Value
seq2 102 8e-17
seq237 91.5 1e-13
seq133 91.5 1e-13
seq65 86.0 6e-12
>seq2
Length=40953715
Score = 102 bits (112), Expect = 8e-17
Identities = 139/194 (72%), Gaps = 0/194 (0%)
Strand=Plus/Plus
Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989
||||| ||||||||||||||||| || ||||| |||||| || || || || | |
Sbjct 19232404 GACTCCTTTTGAATGTTGTAGTCAGACAAAGTACGTCCATCTTCCAGTTGCTTGCCAGCA 19232463
Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049
|||| || | ||| ||||| ||||| || ||||| || || ||| ||| ||||
Sbjct 19232464 AAGATCAGTCTCTGCTGATCAGGAGGAATTCCTTCCTTGTCCTGAATCTTTGCCTTCACA 19232523
Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109
| ||| | ||||| | || || || |||| || | || || || || || ||||||
Sbjct 19232524 TTTTCTATTGTATCCGAGGGTTCAACCTCGAGAGTAATGGTCTTCCCCGTAAGGGTTTTT 19232583
Query 132110 ATGAAAATCTGCAT 132123
| ||||||||||||
Sbjct 19232584 ACGAAAATCTGCAT 19232597
>seq237
Length=2526385
Score = 91.5 bits (100), Expect = 1e-13
Identities = 146/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 131905 CAAGCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACG 131964
|||||||| ||||| || | | ||||| || || |||||||||||| || ||| ||
Sbjct 2103807 CAAGCGCAGAACCAGGTGAAGAGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCG 2103866
Query 131965 CGAATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTC 132024
| ||| || |||||||| |||| | |||| | | ||| || || || || ||||| ||
Sbjct 2103867 CCCATCCTCCAGCTGTTTCCCGGCAAAGATCAACCTCTGCTGGTCAGGGGGGATGCCCTC 2103926
Query 132025 TTTATCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGT 132084
||| || ||| || ||||| | || | || || | |||||||| || | ||
Sbjct 2103927 TTTCTCTTGAATCTTCCCTTTCACATTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGT 2103986
Query 132085 CAGCGTTTTACCAGTCAGAGTTTTTATGAA 132114
| || ||||| ||||| || || | |||
Sbjct 2103987 GATGGTCTTACCCGTCAGGGTCTTCACGAA 2104016
>seq133
Length=6340249
Score = 91.5 bits (100), Expect = 1e-13
Identities = 79/98 (81%), Gaps = 0/98 (0%)
Strand=Plus/Minus
Query 147505 TACTGCACGATTTCGGCGCACAGGTTGCTGCATTTTATGACTCCCAAATTTTGCTGATTG 147564
|||| || ||||| | |||||||||||||||||| || ||||| || ||||| |||
Sbjct 5009179 TACTCTACTATTTCTGTGCACAGGTTGCTGCATTTGATTGTTCCCAGGTTCTGCTGGTTG 5009120
Query 147565 CTTTTCCGATTGCACGCGTCTTTGAAGAGCATGTACGG 147602
|| |||||||| || | ||||||| | |||||||||||
Sbjct 5009119 CTCTTCCGATTACAGGAGTCTTTGTAAAGCATGTACGG 5009082
>seq65
Length=10028950
Score = 86.0 bits (94), Expect = 6e-12
Identities = 151/220 (69%), Gaps = 0/220 (0%)
Strand=Plus/Minus
Query 131905 CAAGCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACG 131964
|| ||||| |||| ||| | | | |||||||| || |||||||| || | || ||
Sbjct 4318174 CAGGCGCAGGACCAGATGCAGGGTGGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCG 4318115
Query 131965 CGAATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTC 132024
|||||||||||| || || | | |||| || | ||| || || || || ||||||||
Sbjct 4318114 GCCATCTTCGAGCTGCTTGCCAGCAAAGATAAGCCTCTGCTGGTCAGGGGGGATGCCTTC 4318055
Query 132025 TTTATCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGT 132084
||| || || || | || | | ||| | || || | |||||||| || | ||
Sbjct 4318054 TTTGTCTTGGATCTTGTCCTTTACATTTTCAATGGTGTCACTGGGCTCCACCTCCAGAGT 4317995
Query 132085 CAGCGTTTTACCAGTCAGAGTTTTTATGAAAATCTGCATG 132124
| || || || ||||| || || | ||| |||||||||
Sbjct 4317994 GATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCATG 4317955
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 476564831687880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |