Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mustela_20putorius_20furo_20[refseq_20GCF_5F000215625.1_202011-06- 02] 7,783 sequences; 2,410,879,678 total letters Query= NC_026141.2 Length=4988 Score E Sequences producing significant alignments: (Bits) Value seq92 113 1e-21 seq400 102 3e-18 seq330 98.7 3e-17 seq266 98.7 3e-17 seq153 98.7 3e-17 seq39 98.7 3e-17 seq18 98.7 3e-17 seq210 80.6 8e-12 >seq92 Length=7904815 Score = 113 bits (124), Expect = 1e-21 Identities = 68/72 (94%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 |||||| |||||||||||||||||| |||||||||||||||||||||||||||||||| | Sbjct 7160455 GCTGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCAATC 7160396 Query 2829 CCGGGCTTCAGC 2840 ||||| |||||| Sbjct 7160395 CCGGGTTTCAGC 7160384 >seq400 Length=547227 Score = 102 bits (112), Expect = 3e-18 Identities = 67/74 (91%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 2767 TGGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAA 2826 ||||||| |||||||||||||||||| |||||||||||||||||||||||||||||| | Sbjct 414402 TGGCTGAGATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGA 414343 Query 2827 CCCCGGGCTTCAGC 2840 |||||| ||||| Sbjct 414342 TCCCGGGTCTCAGC 414329 >seq330 Length=1077443 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct 271822 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 271881 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 271882 CCGGGTTTCGGC 271893 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct 410784 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 410843 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 410844 CCGGGTTTCGGC 410855 Score = 84.2 bits (92), Expect = 7e-13 Identities = 58/66 (88%), Gaps = 0/66 (0%) Strand=Plus/Plus Query 2768 GGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAAC 2827 ||| | | |||||||||||||||||| | ||||||||||||| |||||||||||||| | Sbjct 413315 GGCCGGAATAGCTCAGTTGGGAGAGCGTCAGACTGAAGATCTGAAGGTCCCTGGTTCGAT 413374 Query 2828 CCCGGG 2833 |||||| Sbjct 413375 CCCGGG 413380 Score = 84.2 bits (92), Expect = 7e-13 Identities = 58/66 (88%), Gaps = 0/66 (0%) Strand=Plus/Minus Query 2768 GGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAAC 2827 ||| | | |||||||||||||||||| | ||||||||||||| |||||||||||||| | Sbjct 413983 GGCCGGAATAGCTCAGTTGGGAGAGCGTCAGACTGAAGATCTGAAGGTCCCTGGTTCGAT 413924 Query 2828 CCCGGG 2833 |||||| Sbjct 413923 CCCGGG 413918 >seq266 Length=1996252 Score = 98.7 bits (108), Expect = 3e-17 Identities = 63/69 (91%), Gaps = 0/69 (0%) Strand=Plus/Plus Query 2772 GAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACCCCG 2831 ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | |||| Sbjct 1214182 GAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATCCCG 1214241 Query 2832 GGCTTCAGC 2840 || ||| || Sbjct 1214242 GGTTTCGGC 1214250 >seq153 Length=5519362 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct 5386261 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 5386320 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 5386321 CCGGGTTTCGGC 5386332 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct 5392475 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 5392534 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 5392535 CCGGGTTTCGGC 5392546 >seq39 Length=13401118 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct 1502930 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 1502989 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 1502990 CCGGGTTTCGGC 1503001 >seq18 Length=19408490 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct 15523912 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 15523971 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 15523972 CCGGGTTTCGGC 15523983 >seq210 Length=3289994 Score = 80.6 bits (88), Expect = 8e-12 Identities = 56/64 (88%), Gaps = 0/64 (0%) Strand=Plus/Minus Query 2773 AAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACCCCGG 2832 ||| ||||||||||||| || ||||||||||||||||| |||||||||||||| || || Sbjct 894447 AAGCAGCTCAGTTGGGAAAGTGTTAGACTGAAGATCTAACGGTCCCTGGTTCAATCCTGG 894388 Query 2833 GCTT 2836 | || Sbjct 894387 GTTT 894384 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15848250778035