Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mustela_20putorius_20furo_20[refseq_20GCF_5F000215625.1_202011-06- 02] 7,783 sequences; 2,410,879,678 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq81 289 3e-73 seq63 205 1e-47 seq9 163 3e-35 seq54 159 4e-34 seq77 120 4e-22 >seq81 Length=8639600 Score = 289 bits (320), Expect = 3e-73 Identities = 256/320 (80%), Gaps = 0/320 (0%) Strand=Plus/Minus Query 171072 GTGGTGACCCAGGATGAGAGGGTGCTGCTGAACACGCCAGCCTCCCTGAAATGCTCCCTG 171131 ||||||||||| |||| | || |||||||| || || ||| | | |||||| ||| Sbjct 6612267 GTGGTGACCCAAAATGAAAAAAGGCCACTGAACACACCTGCTTCCTTAAGATGCTCTCTG 6612208 Query 171132 CAGACTTCTCAGGAGGTGCTGATTGTCACCTGGCAGAAAATCAAGCCCACCATTCCAGAG 171191 || | |||| |||| || ||||||| || ||||||||||||||||| | ||||| Sbjct 6612207 CAAAATTCTGAGGAAGTCTTGATTGTGACATGGCAGAAAATCAAGCCTGTTAGCCCAGAA 6612148 Query 171192 AACATGATAACTTTTAGCAAAGACCACGGGGTGGTGGTCCAGCCGGCTTATAAGGACAAG 171251 |||||| | || || ||||| |||| ||||| ||||||||||| || |||||||||||| Sbjct 6612147 AACATGGTCACCTTCAGCAAGAACCATGGGGTTGTGGTCCAGCCCGCCTATAAGGACAAG 6612088 Query 171252 ATAAACATCACCCAGCTTGGACTCCAAAACTCAACCATCACTTTTTGGAATACCACCTTA 171311 ||||||||||| |||| | |||| | |||||||||||||| || |||||||||||| | Sbjct 6612087 ATAAACATCACTGAGCTGGAACTCAAGAACTCAACCATCACGTTCTGGAATACCACCCTG 6612028 Query 171312 GAGGACGAGGGGTGCTACAACTGCCTCTTTAACACCTTTGGGTCTGGGAAAATCTCGGGG 171371 ||||| || ||||| ||||| |||||||| || || ||||| |||||||| ||||| || Sbjct 6612027 GAGGATGAAGGGTGTTACAAGTGCCTCTTCAATACTTTTGGTTCTGGGAAGATCTCAGGA 6611968 Query 171372 GTGGCCTGCCTCACCCTCTC 171391 | ||||||||||||||||| Sbjct 6611967 ATAGCCTGCCTCACCCTCTC 6611948 Score = 219 bits (242), Expect = 5e-52 Identities = 211/271 (78%), Gaps = 0/271 (0%) Strand=Plus/Minus Query 171388 TCTCNGTGCAGCCCACTGTGTTTCTGCATTATAAATTTTTTGATGACCACCTGAACATCA 171447 || | || |||||||| ||||| || || |||||||| || || ||||||||||| |||| Sbjct 6609532 TCCCAGTACAGCCCACAGTGTTCCTTCACTATAAATTCTTCGAAGACCACCTGAATATCA 6609473 Query 171448 CCTGTTCTGCCAATGCCCGCCCGCCACCTCAGATTTTTTGGAAGATTTCGGGGTCAGAAA 171507 | || ||||||||||||||||| | ||| ||| | |||||| | || ||||||| | Sbjct 6609472 CTTGCTCTGCCAATGCCCGCCCAGCCCCTGTGATCTCCTGGAAGGTGTCTGGGTCAGGGA 6609413 Query 171508 TTGAAAACAGTAGCGAGGTTCTTTCCCATTCTAATGGAACTACTTCTGTAACCAGTGTAC 171567 |||| ||||||| |||||||| ||||| | ||||| || || ||||| || || || | Sbjct 6609412 TTGACAACAGTACTGAGGTTCTCTCCCACCCCAATGGGACCACATCTGTCACGAGCGTCC 6609353 Query 171568 TCCAAGTTAAAGACCCCAAGAGTCAGTTGGGAAAGGAGGTTATCTGCCAAGTGTGGCACC 171627 | || || |||||||||||||||||| |||| |||||||| ||||||| ||| |||| Sbjct 6609352 TTCAGGTCAAAGACCCCAAGAGTCAGGTGGGGAAGGAGGTGGTCTGCCAGGTGCTTCACC 6609293 Query 171628 TGGGAAATGTAACTAACTTAAGGGAAACTGT 171658 |||| || || || | | | | | ||||||| Sbjct 6609292 TGGGGAACGTGACCAGCGTCACGCAAACTGT 6609262 >seq63 Length=10485012 Score = 205 bits (226), Expect = 1e-47 Identities = 239/320 (75%), Gaps = 2/320 (1%) Strand=Plus/Plus Query 146826 AAAATCTTCTGCCCTGAAATCGTCTATGTCCTCCACCCGCCTCAAAATCTTGAGCTTGGG 146885 ||| ||||| ||| |||| || || || ||| || | | || |||||||| || Sbjct 8862350 AAAGTCTTCAGCCTTGAAGTCATCCATTGTCTCAACTTTTCGAAGGATTTTGAGCTTCGG 8862409 Query 146886 GAAGGGTCGGGGGTTCCTGGCCA-GCTGAATTTTCAGGGGCTCCACGTGGTTGAGGTAGA 146944 ||| || | || ||| || | |||| |||||||| |||| | ||| || ||||| | Sbjct 8862410 GAAAGGCCTTGG-TTCTTGCTGAAGCTGCATTTTCAGCAGCTCAATGTGATTCAGGTAAA 8862468 Query 146945 CGTGCGCGTCCCCCAGGGTGTGCACAAAGTCCCCCGGCTTAAGGCCGGTCACGTGGGCCA 147004 || || || |||| || || || ||||| || ||||| || || || | ||| || | Sbjct 8862469 TATGTGCATCTCCCAAAGTATGTACGAAGTCACCTGGCTTTAGTCCTGTGATGTGTGCAA 8862528 Query 147005 CCATGTAGGTGAGCAGCGAGTAGCTGGCTATGTTGAAGGGGACCCCCAGGCCCATGTCCC 147064 ||||||||||||||| | |||||||| ||||||||||| || |||||||||||||||| Sbjct 8862529 TCATGTAGGTGAGCAGGGCATAGCTGGCGATGTTGAAGGGCACGCCCAGGCCCATGTCCC 8862588 Query 147065 CCGACCTCTGGTACAGCTGGCACGAGAGCTCCCCGTCGGCCACGTAAAACTGGCACAGGA 147124 | |||||||||||||||||||| || || || || | ||||| |||||||||| ||| Sbjct 8862589 CTGACCTCTGGTACAGCTGGCAGGACAGTTCACCATTCACCACGCAAAACTGGCAGAGGG 8862648 Query 147125 TGTGGCACGGCGGCAGCGCC 147144 |||||||| || || ||| Sbjct 8862649 CATGGCACGGAGGGAGGGCC 8862668 >seq9 Length=27295742 Score = 163 bits (180), Expect = 3e-35 Identities = 135/165 (82%), Gaps = 0/165 (0%) Strand=Plus/Plus Query 146982 CTTAAGGCCGGTCACGTGGGCCACCATGTAGGTGAGCAGCGAGTAGCTGGCTATGTTGAA 147041 ||| ||||| || | ||| || | ||||||||||||||| | |||||||| |||||||| Sbjct 15743169 CTTTAGGCCTGTGATGTGTGCGATCATGTAGGTGAGCAGGGCATAGCTGGCGATGTTGAA 15743228 Query 147042 GGGGACCCCCAGGCCCATGTCCCCCGACCTCTGGTACAGCTGGCACGAGAGCTCCCCGTC 147101 ||| || ||||||||||| ||||| |||||||||||||||||||| || ||||| || | Sbjct 15743229 GGGCACGCCCAGGCCCATATCCCCTGACCTCTGGTACAGCTGGCAGGACAGCTCACCATT 15743288 Query 147102 GGCCACGTAAAACTGGCACAGGATGTGGCACGGCGGCAGCGCCAT 147146 ||||||| |||||||| ||| |||||||| || || ||||| Sbjct 15743289 CACCACGTAGAACTGGCAGAGGGCATGGCACGGAGGGAGGGCCAT 15743333 >seq54 Length=12252720 Score = 159 bits (176), Expect = 4e-34 Identities = 134/167 (80%), Gaps = 12/167 (7%) Strand=Plus/Plus Query 178231 AGGGTTACTTGGGTTGCCAGGCCTTGTCAGAGATGATTCAGTTTTACTTGGAGGAGGTGA 178290 |||||||| |||||||||| ||| |||| |||||||| |||||||||||||||||||||| Sbjct 675183 AGGGTTACCTGGGTTGCCAAGCCCTGTCGGAGATGATCCAGTTTTACTTGGAGGAGGTGA 675242 Query 178291 TGCCTCAGGCCGAGAATCACAGCGGGGGTGGAGGCCCGGACATTAAGGAGCATGTAAACT 178350 |||| ||||||||||| ||| | ||| || | |||||||| || |||| Sbjct 675243 TGCCCCAGGCCGAGAACCAC------------GACCCAGAAGTCAAGGAGCACGTGAACT 675290 Query 178351 CTCTGGGGGAAAAGCTAAAGACCCTTAGAGTGAGGCTGCGGCGATGT 178397 | |||||||||||||| |||||||| | ||||||||||||| ||| Sbjct 675291 CGCTGGGGGAAAAGCTGAAGACCCTGCGGCTGAGGCTGCGGCGCTGT 675337 Score = 84.2 bits (92), Expect = 3e-11 Identities = 64/76 (84%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 178462 AGCTTCAAGAAAAGGGTGTTTACAAAGCTATGAGTGAGTTTGATATTTTTATTAACTACA 178521 |||| ||||| | ||||| |||||||| |||||||||||||| || || || ||||||| Sbjct 677660 AGCTCCAAGAGAGAGGTGTCTACAAAGCCATGAGTGAGTTTGACATCTTCATCAACTACA 677719 Query 178522 TAGAAGCTTACATGAC 178537 ||||| | |||||||| Sbjct 677720 TAGAAACCTACATGAC 677735 >seq77 Length=8881903 Score = 120 bits (132), Expect = 4e-22 Identities = 210/305 (69%), Gaps = 8/305 (3%) Strand=Plus/Plus Query 8610 GTACTCTCTGGTGTTTTTGTTTGGGCTAATTGGCAATGCCCTGGTGATCCTAGTCCTCAT 8669 |||||| ||||||| | | || || ||||||| ||||||| | || |||||||| Sbjct 3858373 GTACTCCTTGGTGTTCATCATCGGCCTGGTTGGCAACATCCTGGTGCTGCTGGTCCTCAT 3858432 Query 8670 AAAGTACAAGAGGCTCAGGATCATGACCAACATCTTCCTGTTCAACCTGGCCCTTGGTGA 8729 || |||||||||||| || |||||||| ||||| ||| ||||||||||| || ||| Sbjct 3858433 GCAGCACAAGAGGCTCAAGAGCATGACCAGCATCTACCTCCTCAACCTGGCCATTTCTGA 3858492 Query 8730 CCTGCTGCTGATTTTCACCCTCCCCTTTTGGATTCACTTCCA-CTCGGGGGGAACTGGTG 8788 |||||| | | ||||| || ||||| ||||| ||| | | || || |||||| | Sbjct 3858493 CCTGCTCTTCCTCTTCACGCTGCCCTTCTGGATCGACTACAAGCTGAAGGATAACTGGAG 3858552 Query 8789 GGTGGGACGCCGACCACCACATGTGTAAGTTTATAGTGGGCCTTTGCAACGTGGCACTGT 8848 | | | | || |||||||| | ||| ||| || || ||| Sbjct 3858553 -------CTTCAATGATGGCACCTGTAAGTTGCTCTCGGGGTTTTATTACACGGGTTTGT 3858605 Query 8849 ACAGCGAAGTCCTGTTTATCATCCTGTTGACTCTGGACAGGTATCTTGCAGTTGTGTACG 8908 ||||||| || | || ||||||||| |||| |||||||||| || || | || ||| Sbjct 3858606 ACAGCGAGATCTTTTTCATCATCCTGCTGACCGTGGACAGGTACCTGGCCATCGTCCACG 3858665 Query 8909 CGGTG 8913 | ||| Sbjct 3858666 CTGTG 3858670 Score = 109 bits (120), Expect = 6e-19 Identities = 531/834 (64%), Gaps = 57/834 (7%) Strand=Plus/Minus Query 8610 GTACTCTCTGGTGTTTTTGTTTGGGCTAATTGGCAATGCCCTGGTGATCCTAGTCCTCAT 8669 |||||| |||||||| || |||| || | ||||||| ||||| | | |||||| Sbjct 3815245 GTACTCCCTGGTGTTCGTGGTTGGTCTGCTGGGCAATGTGGTGGTGGTGGTCATCCTCAC 3815186 Query 8670 AAAGTACAAGAGGCTCAGGATCATGACCAACATCTTCCTGTTCAACCTGGCCCTTGGTGA 8729 ||| || ||||||||| |||| |||||||||||||||||| |||| ||||| || ||| Sbjct 3815185 AAAATATAAGAGGCTCCGGATTATGACCAACATCTTCCTGCTCAATTTGGCCATTTCTGA 3815126 Query 8730 CCTGCTGCTGATTTTCACCCTCCCCTTTTGGATTCACTTCCACTCGGGGGGAACTGGTGG 8789 | |||| | | || | || || |||||||||| | | |||| || Sbjct 3815125 CTTGCTCTTTCTAATCTCTCTGGTATTCTGGATTCACT--ATGTTATGTGGAA----TGA 3815072 Query 8790 GTGGGACGCCGACCACCACATGTGTAAGTTTATAGTGGGCCTTTGCAACGTGGCACTGTA 8849 ||||| | | ||||||||| || || || |||| || ||| | || Sbjct 3815071 GTGGGTTTTTGGTTCCTTCATGTGTAAATTCATCTCTGGGCTTTATTACATGGGCTTATA 3815012 Query 8850 CAGCGAAGTCCTGTTTATCATCCTGTTGACTCTGGACAGGTATCTTGCAGTTGTGTACGC 8909 || || || | || ||||||||| |||| | ||| |||| || || |||| |||| Sbjct 3815011 TAGTGAGATCTTTTTCATCATCCTGCTGACCATAGACCGGTACCTGGCCATTGTCCACGC 3814952 Query 8910 GG----TGGCTTACAGGCTGGTCCGCGTGGTACCAATAGGCATCCTCGCCAGCCTCCTGG 8965 | || ||||| || ||| || | | || || || || | || Sbjct 3814951 CGTGTTTGCCTTACGAGC----CCGGACTGTCACTTTCGGTGTCGTCATGAGTGTTCTAA 3814896 Query 8966 CCTGGATTCTGGCTGTGTTGGGAACCATGCCAGAGTTTATCTTTTATGAATCCAATAATG 9025 ||||| | ||||| | | | | ||| | || || |||||||| |||| ||| | || | Sbjct 3814895 CCTGGGTCCTGGCAGGGCTAGCAACTGTCCCTGAATTTATCTTCCATGAGTCCCAAAAGG 3814836 Query 9026 -CCACAGGCAAGGGGGTCTGCCAAGCCTC-CTACAC------------AGACTTTTGGAA 9071 || ||| | ||||| | ||||| |||| | ||| ||||| Sbjct 3814835 AGGACTCCCAA-CGTGTCTG-CTTGCCTCTCTACCCAAAAAACCAAGAAGATAGATGGAA 3814778 Query 9072 GGGGGTTGATGTTACCAGCATGACCAT----GGTCACCCTCATCCTGCCTTTGCTTATCA 9127 | | ||| || |||| || |||| || |||||| |||| |||| Sbjct 3814777 GCTTTTCCATGCCCTGAGAATGAATATCTTGGGTCTTGCT----CTGCCTGTGCTCATCA 3814722 Query 9128 TGGCCTTCTGCTACTGGAAAATCATCAAGGTCCTCCTCA-AGGCCCACAACAGGTCGAGA 9186 ||| ||||||||| |||||| || || || | | |||| | | || | Sbjct 3814721 TGGTTGTCTGCTACTCCGGAATCATTAAAACACTGCTGAGATGCCC----CGGTAAGAAA 3814666 Query 9187 AACCTGCACGCCGTCAAGCTCATTTTGATCATGGTGGTGCTTTATTTTGTCTTTTGGATC 9246 || | ||| || ||||||||| |||| ||||| | | ||| || || |||| Sbjct 3814665 AAGTACAAGGCCATCCGGCTCATTTTTGTCATCATGGTGGTCTTTTTCGTTTTCTGGACA 3814606 Query 9247 CCCTACAAC---GTCCTGCTCAT-TTTACACACCTACCAAGAGGCCATTTTTGGGCCAGA 9302 ||||||||| ||||| ||| | | | | | | ||| | | |||| | || | Sbjct 3814605 CCCTACAACCTGGTCCTCCTCCTCTCTGCTTTTCAAACAA----TCTTCTTTGAGACAAA 3814550 Query 9303 CTGTGAAGCGCGGCGCAGG---GTGGACATGGCCCTCTTGGTGGCTGAGATGATCGCCTG 9359 |||||| || | ||| | ||||| ||||| | |||| | ||| ||||||||| Sbjct 3814549 CTGTGA---GCAGAGCAAGCATCTGGACGTGGCCATGCAGGTGACGGAGGTGATCGCCTA 3814493 Query 9360 CACCCACTGCTGCGTCAACCCCGTCATCTACGCGTTTGTGGGCGAAAAGTTCCA 9413 ||| |||||||||||||||||||||||||| || || || || || | |||||| Sbjct 3814492 CACGCACTGCTGCGTCAACCCCGTCATCTATGCCTTCGTCGGGGAGAGGTTCCA 3814439 Score = 82.4 bits (90), Expect = 9e-11 Identities = 66/80 (83%), Gaps = 0/80 (0%) Strand=Plus/Plus Query 9325 GACATGGCCCTCTTGGTGGCTGAGATGATCGCCTGCACCCACTGCTGCGTCAACCCCGTC 9384 ||| ||||| || |||| | ||| ||||||||| ||| |||||||||||||||||||| Sbjct 3859091 GACCTGGCCATCCAGGTGACGGAGGTGATCGCCTACACGCACTGCTGCGTCAACCCCGTG 3859150 Query 9385 ATCTACGCGTTTGTGGGCGA 9404 |||||||| || || || || Sbjct 3859151 ATCTACGCCTTCGTCGGGGA 3859170 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583431233911200