Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Mustela_20putorius_20furo_20[refseq_20GCF_5F000215625.1_202011-06-
02] 7,783 sequences; 2,410,879,678 total letters
Query= NC_026511.1
Length=140913
Score E
Sequences producing significant alignments: (Bits) Value
seq2 120 3e-22
seq323 105 6e-18
seq161 102 7e-17
seq101 102 7e-17
seq65 98.7 9e-16
seq50 86.0 6e-12
>seq2
Length=40953715
Score = 120 bits (132), Expect = 3e-22
Identities = 165/231 (71%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569
|||||||| | |||||||| | ||| | || |||||||||||||||||| || | |
Sbjct 19232371 CCACCACGAAGTCTCAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGAC 19232430
Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629
|| || || | || ||||| ||||| || ||||| |||| | |||||| || | ||||
Sbjct 19232431 AAAGTACGTCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTCTGCTGATCAGGAGGA 19232490
Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689
| | ||||||||| |||||| ||||| | || | | || || | ||| |||
Sbjct 19232491 ATTCCTTCCTTGTCCTGAATCTTTGCCTTCACATTTTCTATTGTATCCGAGGGTTCAACC 19232550
Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCATTCTG 35740
|| | || || || || ||||| | ||||| || || |||||||| |||
Sbjct 19232551 TCGAGAGTAATGGTCTTCCCCGTAAGGGTTTTTACGAAAATCTGCATCCTG 19232601
>seq323
Length=1159590
Score = 105 bits (116), Expect = 6e-18
Identities = 141/196 (72%), Gaps = 0/196 (0%)
Strand=Plus/Plus
Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604
||| || || ||||||||||| | | || || | || ||||||||||| || |||||
Sbjct 303428 CTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAA 303487
Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664
|| | || ||||||||| | || | || |||||| || |||||| ||||| | |
Sbjct 303488 GATAAGCCTCTGCTGGTCGGGGGGGATGCCCTCCTTATCTTGGATCTTGGCCTTCACATT 303547
Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724
| | ||||| || | |||||||||| ||||| || || || |||| || |||||
Sbjct 303548 CTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCAC 303607
Query 35725 AAATATCTGCATTCTG 35740
|| ||||||||| ||
Sbjct 303608 GAAAATCTGCATTTTG 303623
>seq161
Length=5000004
Score = 102 bits (112), Expect = 7e-17
Identities = 140/196 (71%), Gaps = 0/196 (0%)
Strand=Plus/Minus
Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604
||| || || ||||||||||| | | || || | || || |||||||| || |||||
Sbjct 410081 CTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCTTCTAGCTGCTTGCCAGCAAA 410022
Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664
|| | || ||||||||| | || | || |||||| || |||||| |||| | |
Sbjct 410021 GATAAGCCTCTGCTGGTCAGGGGGGATGCCCTCCTTATCTTGGATCTTGGCTTTCACATT 409962
Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724
| | | ||||| || | |||||||||| ||||| || || || |||| || |||||
Sbjct 409961 TTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCAC 409902
Query 35725 AAATATCTGCATTCTG 35740
|| ||||||||| ||
Sbjct 409901 GAAAATCTGCATTTTG 409886
>seq101
Length=7325712
Score = 102 bits (112), Expect = 7e-17
Identities = 137/191 (72%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605
|| || || ||||||||||| | | || || | || ||||||||||| || |||||
Sbjct 127605 TCGTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAG 127664
Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665
|| | || ||||||||| | || | || |||||| || |||||| |||| | ||
Sbjct 127665 ATAAGCCTCTGCTGGTCAGGGGGGATGCCCTCCTTATCTTGGATCTTGGCTTTCACATTT 127724
Query 35666 GCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACA 35725
| | ||||| || | |||||||||| ||||| || || || |||| || |||||
Sbjct 127725 TCAATGGTGTCACTAGGCTCCACCTCCAGAGTGATGGTCTTGCCAGTCAGGGTCTTCACG 127784
Query 35726 AATATCTGCAT 35736
|| ||||||||
Sbjct 127785 AAGATCTGCAT 127795
Score = 100 bits (110), Expect = 3e-16
Identities = 140/196 (71%), Gaps = 3/196 (2%)
Strand=Plus/Plus
Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604
||| || || ||||||||||| | | || || | || ||||||||||| || |||||
Sbjct 127832 CTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAA 127891
Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664
|| | || ||||||||| | || | || ||| ||||| |||||| ||||| | |
Sbjct 127892 GATAAGCCTCTGCTGGTCGGGGGGGATGCCCTCTTTGTCTTGGATCTTGGCCTTCACATT 127951
Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724
| | ||||| || |||||||||| ||||| || || || |||| || |||||
Sbjct 127952 ---CTCGGTGTCACTGAGCTCCACCTCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCAC 128008
Query 35725 AAATATCTGCATTCTG 35740
|| ||||||||| ||
Sbjct 128009 GAAAATCTGCATTTTG 128024
>seq65
Length=10028950
Score = 98.7 bits (108), Expect = 9e-16
Identities = 137/192 (71%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604
||| || || ||||||||||| | | || || | || || |||||||| || |||||
Sbjct 4318147 CTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCTTCGAGCTGCTTGCCAGCAAA 4318088
Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664
|| | || ||||||||| | || | || || ||||| |||||| | ||| | | |
Sbjct 4318087 GATAAGCCTCTGCTGGTCAGGGGGGATGCCTTCTTTGTCTTGGATCTTGTCCTTTACATT 4318028
Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724
| | | ||||| || | |||||||||| ||||| || || || |||| || |||||
Sbjct 4318027 TTCAATGGTGTCACTGGGCTCCACCTCCAGAGTGATGGTCTTGCCGGTCAGGGTCTTCAC 4317968
Query 35725 AAATATCTGCAT 35736
|| ||||||||
Sbjct 4317967 GAAGATCTGCAT 4317956
Score = 98.7 bits (108), Expect = 9e-16
Identities = 137/192 (71%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604
||| || || ||||||||||| | | || || | || || |||||||| || |||||
Sbjct 4318375 CTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCTTCTAGCTGCTTGCCTGCAAA 4318316
Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664
|| | || ||||||||| | || | || |||||| || |||||| ||| | | |
Sbjct 4318315 GATAAGCCTCTGCTGGTCAGGGGGGATGCCCTCCTTATCTTGGATCTTGGCCTTTACATT 4318256
Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724
| | | ||||| || | |||||||||| ||||| || || || |||| || |||||
Sbjct 4318255 TTCAATGGTGTCACTAGGCTCCACCTCCAGGGTGATGGTCTTGCCAGTCAGGGTCTTCAC 4318196
Query 35725 AAATATCTGCAT 35736
|| ||||||||
Sbjct 4318195 GAAGATCTGCAT 4318184
Score = 93.3 bits (102), Expect = 4e-14
Identities = 116/159 (73%), Gaps = 0/159 (0%)
Strand=Plus/Minus
Query 35582 TCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTG 35641
|| ||||||||||| || ||||| || | || ||||||||| | || | || ||| |||
Sbjct 4317675 TCTTCCAGCTGCTTGCCAGCAAAGATAAGCCTCTGCTGGTCAGGGGGGATGCCCTCTTTG 4317616
Query 35642 TCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATC 35701
|| |||||| ||||| | | | | ||||| || | |||||||||| |||||
Sbjct 4317615 TCTTGGATCTTGGCCTTCACATTATCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATG 4317556
Query 35702 GTTTTACCCGTCAAAGTTTTCACAAATATCTGCATTCTG 35740
|| || | |||| || ||||| || ||||||||||||
Sbjct 4317555 GTCTTGCAGGTCAGGGTCTTCACGAAAATCTGCATTCTG 4317517
>seq50
Length=12588045
Score = 86.0 bits (94), Expect = 6e-12
Identities = 136/193 (70%), Gaps = 3/193 (2%)
Strand=Plus/Plus
Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604
||| || || ||||||||||| | | || | | || || |||||||| || |||||
Sbjct 11770210 CTCTTTCTGGATGTTGTAATCAGAAAGAGTGCAGCCATCTTCTAGCTGCTTGCCGGCAAA 11770269
Query 35605 TATCAACCGCTGCTGGTC-CGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAG 35663
|| | || ||||||||| || || | || ||| || || |||||| ||| | |
Sbjct 11770270 GATAAGCCTCTGCTGGTCACG--GGGATGCCCTCTTTATCTTGGATCTTGGCCTTTACAT 11770327
Query 35664 TTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCA 35723
|| | | ||||| || | |||||||||| ||||| || || || |||| || ||||
Sbjct 11770328 TTTCAATGGTGTCACTGGGCTCCACCTCCAGAGTGATGGTCTTGCCAGTCAGGGTCTTCA 11770387
Query 35724 CAAATATCTGCAT 35736
| || ||||||||
Sbjct 11770388 CGAAGATCTGCAT 11770400
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 450749743417640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |