Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mustela_20putorius_20furo_20[refseq_20GCF_5F000215625.1_202011-06- 02] 7,783 sequences; 2,410,879,678 total letters Query= NC_027016.1 Length=226084 Score E Sequences producing significant alignments: (Bits) Value seq403 120 4e-22 >seq403 Length=533493 Score = 120 bits (132), Expect = 4e-22 Identities = 164/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 213995 CAGATTATTGACGGGGAAGTCTACCCTCCTACCGTCAAGGAGGCCCGAGTGCATATGGTT 214054 ||| | ||||| || || || || ||||| || ||||| || | | ||| | ||| | Sbjct 188830 CAGGTAATTGATGGAGAGGTGTATCCTCCCACAGTCAAAGATACTCAGGTGGAGATGATC 188771 Query 214055 TACGAACCCAGCGTTCCCGAAAAGTTACGTTTCGCACTGGGTAACGAGATGTTTGGACTC 214114 ||| |||| ||||| ||| | | || || || |||| | || | ||||| || Sbjct 188770 TACCCACCCCATGTTCCTGAACACCTGCGGTTTGCTGTGGGCCAGGAAGTCTTTGGGCTG 188711 Query 214115 GTGCCCGGTTTCATGGTGTACGCCATTATCTGGCTGAGAGAGCACAACAGGGTTTGCGAC 214174 ||||| ||| | ||| |||| |||| ||||||||| | || || ||||| || || || Sbjct 188710 GTGCCTGGTCTGATGATGTATGCCACGATCTGGCTGCGGGAACATAACAGAGTGTGTGAT 188651 Query 214175 GTGCTGAAACAAGAGCACCCGGAATGGAACGACGAACAGCTGTTCCAGA 214223 ||||||||||| |||||||| || ||| | || || | |||||||||| Sbjct 188650 GTGCTGAAACAGGAGCACCCAGAGTGGGATGATGAGCGTCTGTTCCAGA 188602 Score = 98.7 bits (108), Expect = 1e-15 Identities = 197/292 (67%), Gaps = 0/292 (0%) Strand=Plus/Minus Query 214601 AGGGAAGGAGATAGCTGTCGAGCTGGAGGCCTTCTACGGTGATATCGAAGCCGTCGAACT 214660 || |||||| || |||| | | | |||||| | || || |||||||| ||| | || || Sbjct 187288 AGAGAAGGAAATGGCTGCAGGGTTAGAGGCCCTTTATGGAGATATCGATGCCATGGAGCT 187229 Query 214661 CTACGCTGATTTCCTCGCTGAAAAACCGTGTCCCGATGCCATCCTCGGTGACGGCGTCCT 214720 || | | |||| | ||||| || |||| ||||||||| | ||||| | | | Sbjct 187228 GTATCCAGCCCTCCTGGTAGAAAAGCCTCGTCCAGATGCCATCTTTGGTGAGACCATGGT 187169 Query 214721 CGAGTCGGGGGCTCCGTTCTCCCTGAGGGGACTCGCGGCGAACGTCATCTGCTCCCCGGG 214780 || ||| || || |||||| ||| ||||| || || |||||| || || | Sbjct 187168 AGAAATGGGAGCACCATTCTCCTTGAAAGGACTTATGGGTAATCCCATCTGTTCGCCTGA 187109 Query 214781 CTACTGGAAACGCAACACACTCGGTAGCTCCGCGAGTTTCAACATCGTGAGGAGCGCGAC 214840 ||||||||| | | || ||||| | | | || || ||| | | | || | Sbjct 187108 CTACTGGAAGCCTAGTACTTTCGGTGGAGAAGTAGGCTTTAAAATCATCAACACTGCCTC 187049 Query 214841 CCTTCAGTCTCTCATCTGTAGCAACGTCAAGGGATGTCCGTTAGCCGCATTC 214892 | |||||||||||||||| | |||||| ||||| ||||| || | |||||| Sbjct 187048 CATTCAGTCTCTCATCTGCAACAACGTGAAGGGCTGTCCTTTTACTGCATTC 186997 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 723270427981920