Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Mustela_20putorius_20furo_20[refseq_20GCF_5F000215625.1_202011-06-
02] 7,783 sequences; 2,410,879,678 total letters
Query= NC_027016.1
Length=226084
Score E
Sequences producing significant alignments: (Bits) Value
seq403 120 4e-22
>seq403
Length=533493
Score = 120 bits (132), Expect = 4e-22
Identities = 164/229 (72%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 213995 CAGATTATTGACGGGGAAGTCTACCCTCCTACCGTCAAGGAGGCCCGAGTGCATATGGTT 214054
||| | ||||| || || || || ||||| || ||||| || | | ||| | ||| |
Sbjct 188830 CAGGTAATTGATGGAGAGGTGTATCCTCCCACAGTCAAAGATACTCAGGTGGAGATGATC 188771
Query 214055 TACGAACCCAGCGTTCCCGAAAAGTTACGTTTCGCACTGGGTAACGAGATGTTTGGACTC 214114
||| |||| ||||| ||| | | || || || |||| | || | ||||| ||
Sbjct 188770 TACCCACCCCATGTTCCTGAACACCTGCGGTTTGCTGTGGGCCAGGAAGTCTTTGGGCTG 188711
Query 214115 GTGCCCGGTTTCATGGTGTACGCCATTATCTGGCTGAGAGAGCACAACAGGGTTTGCGAC 214174
||||| ||| | ||| |||| |||| ||||||||| | || || ||||| || || ||
Sbjct 188710 GTGCCTGGTCTGATGATGTATGCCACGATCTGGCTGCGGGAACATAACAGAGTGTGTGAT 188651
Query 214175 GTGCTGAAACAAGAGCACCCGGAATGGAACGACGAACAGCTGTTCCAGA 214223
||||||||||| |||||||| || ||| | || || | ||||||||||
Sbjct 188650 GTGCTGAAACAGGAGCACCCAGAGTGGGATGATGAGCGTCTGTTCCAGA 188602
Score = 98.7 bits (108), Expect = 1e-15
Identities = 197/292 (67%), Gaps = 0/292 (0%)
Strand=Plus/Minus
Query 214601 AGGGAAGGAGATAGCTGTCGAGCTGGAGGCCTTCTACGGTGATATCGAAGCCGTCGAACT 214660
|| |||||| || |||| | | | |||||| | || || |||||||| ||| | || ||
Sbjct 187288 AGAGAAGGAAATGGCTGCAGGGTTAGAGGCCCTTTATGGAGATATCGATGCCATGGAGCT 187229
Query 214661 CTACGCTGATTTCCTCGCTGAAAAACCGTGTCCCGATGCCATCCTCGGTGACGGCGTCCT 214720
|| | | |||| | ||||| || |||| ||||||||| | ||||| | | |
Sbjct 187228 GTATCCAGCCCTCCTGGTAGAAAAGCCTCGTCCAGATGCCATCTTTGGTGAGACCATGGT 187169
Query 214721 CGAGTCGGGGGCTCCGTTCTCCCTGAGGGGACTCGCGGCGAACGTCATCTGCTCCCCGGG 214780
|| ||| || || |||||| ||| ||||| || || |||||| || || |
Sbjct 187168 AGAAATGGGAGCACCATTCTCCTTGAAAGGACTTATGGGTAATCCCATCTGTTCGCCTGA 187109
Query 214781 CTACTGGAAACGCAACACACTCGGTAGCTCCGCGAGTTTCAACATCGTGAGGAGCGCGAC 214840
||||||||| | | || ||||| | | | || || ||| | | | || |
Sbjct 187108 CTACTGGAAGCCTAGTACTTTCGGTGGAGAAGTAGGCTTTAAAATCATCAACACTGCCTC 187049
Query 214841 CCTTCAGTCTCTCATCTGTAGCAACGTCAAGGGATGTCCGTTAGCCGCATTC 214892
| |||||||||||||||| | |||||| ||||| ||||| || | ||||||
Sbjct 187048 CATTCAGTCTCTCATCTGCAACAACGTGAAGGGCTGTCCTTTTACTGCATTC 186997
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 723270427981920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |