Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Mustela_20putorius_20furo_20[refseq_20GCF_5F000215625.1_202011-06-
02] 7,783 sequences; 2,410,879,678 total letters
Query= NC_027778.1
Length=124244
Score E
Sequences producing significant alignments: (Bits) Value
seq63 176 4e-39
seq17 109 4e-19
seq141 91.5 1e-13
>seq63
Length=10485012
Score = 176 bits (194), Expect = 4e-39
Identities = 285/409 (70%), Gaps = 1/409 (0%)
Strand=Plus/Minus
Query 40863 GAAGGTGATCTTGGTCCTGTTTATGGATTTCAGTCGCGACATTTTGGAGCAAAATATGAC 40922
||||| ||| | || || ||||||| ||||||| | |||||||| ||| ||||
Sbjct 8862855 GAAGGGGATTTAGGCCCAGTTTATGTCTTTCAGTGGAAGCATTTTGGGGCAGAATACATA 8862796
Query 40923 ACTATGTACTCTGATTATACCAATAAAGGAATGGATCAATTACAGTGCGTTATAGATACG 40982
|| | | || |||||| | | ||||| | || ||| | || || || || ||
Sbjct 8862795 GATAAGGATTCAGATTATTCAGGTCAAGGAGTAGACCAACTGCAAAAGGTCATTGACACA 8862736
Query 40983 ATTAAATCCGATCCCGATAGCCGACGTATAATATTGTGCGCGTGGAACCCAACGGACGTA 41042
|| ||| || | ||| | | || | || || || | | ||||| |||| || |
Sbjct 8862735 ATCAAA-CCAACCCCAACGACAGAAGAATCATCCTGAGTGGCTGGAATCCAAAAGATATT 8862677
Query 41043 CATTTGATGGCATTGCCACCTTGTCATTTGTTATGTCAGTTTTACGTTTGCAATGGTGAA 41102
| | ||| ||| | || || || ||| | || ||||||| ||| |||||||||
Sbjct 8862676 CCTCTGACGGCCCTCCCTCCGTGCCATGCCCTCTGCCAGTTTTGCGTGGTGAATGGTGAA 8862617
Query 41103 CTGTCATGTCAATTGTATCAAAGATCAGGTGACATGGGACTAGGGGTCCCGTTTAACATA 41162
||||| || || |||| || || ||||| |||||||| || || || || || |||||
Sbjct 8862616 CTGTCCTGCCAGCTGTACCAGAGGTCAGGGGACATGGGCCTGGGCGTGCCCTTCAACATC 8862557
Query 41163 GCGAGTTATGCTCTGCTCACGTATATGATTGCACACGTTACCAATTTAAAACCTGGTGAA 41222
|| || ||||| |||||||| || |||||||||||| | || |||| || |||||
Sbjct 8862556 GCCAGCTATGCCCTGCTCACCTACATGATTGCACACATCACAGGACTAAAGCCAGGTGAC 8862497
Query 41223 TTTGTTCACACGTTAGGAGATGGACATATTTACATTAATCACATAGAGC 41271
|| || || || || ||||||| |||||||||| | |||||||| ||||
Sbjct 8862496 TTCGTACATACTTTGGGAGATGCACATATTTACCTGAATCACATTGAGC 8862448
>seq17
Length=19722643
Score = 109 bits (120), Expect = 4e-19
Identities = 89/108 (82%), Gaps = 0/108 (0%)
Strand=Plus/Plus
Query 43913 CAAGAAGTTCAATTACCAGAAGCACGATGTTTTTATGGGTTTCAAATTGCCATAGAAAAT 43972
||||||||||| | ||||||| || ||||| ||||| || ||||||||||| |||||
Sbjct 6747026 CAAGAAGTTCAGATCACAGAAGCCCGCTGTTTCTATGGCTTCCAAATTGCCATGGAAAAC 6747085
Query 43973 ATTCATTCGGAAATGTACAGTCTTCTGATAGATACGTACATCAAAGAT 44020
|| |||||||| ||||||||||| || || || || ||||| ||||||
Sbjct 6747086 ATCCATTCGGAGATGTACAGTCTCCTCATTGACACTTACATTAAAGAT 6747133
>seq141
Length=6018405
Score = 91.5 bits (100), Expect = 1e-13
Identities = 77/95 (81%), Gaps = 0/95 (0%)
Strand=Plus/Plus
Query 44493 AAAACCCGTTTGATTTTATGGAAAATATTTCGTTGGAAGGCAAAACAAACTTTTTTGAAA 44552
|||| || ||||||||||||||||| ||||| |||||||| |||||||| || ||||| |
Sbjct 2352618 AAAATCCCTTTGATTTTATGGAAAACATTTCTTTGGAAGGGAAAACAAATTTCTTTGAGA 2352677
Query 44553 AACGCGTTGGAGAATATCAGCGAATGGGCGTCATG 44587
|||| || | ||| ||||| || | | ||||||
Sbjct 2352678 AACGAGTGGCAGAGTATCAACGTTTTGCAGTCATG 2352712
Score = 82.4 bits (90), Expect = 6e-11
Identities = 68/83 (82%), Gaps = 0/83 (0%)
Strand=Plus/Plus
Query 43700 TTTGTCGTGTTTCCAATTCAATATCATGACATATGGCAAATGTACAAAAAAGCACAGGCG 43759
|| ||| | |||||||| ||||| | |||||| ||| ||||||| ||| | ||||||||
Sbjct 2325516 TTCGTCATCTTTCCAATCCAATACCCTGACATTTGGAAAATGTATAAACAGGCACAGGCA 2325575
Query 43760 TCATTTTGGACAGCAGAAGAAGT 43782
|| || |||||||||||||| ||
Sbjct 2325576 TCCTTCTGGACAGCAGAAGAGGT 2325598
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397418299186915
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |