Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Mustela_20putorius_20furo_20[refseq_20GCF_5F000215625.1_202011-06-
02] 7,783 sequences; 2,410,879,678 total letters
Query= NC_028099.1
Length=122522
Score E
Sequences producing significant alignments: (Bits) Value
seq63 116 3e-21
seq9 84.2 2e-11
>seq63
Length=10485012
Score = 116 bits (128), Expect = 3e-21
Identities = 364/559 (65%), Gaps = 10/559 (2%)
Strand=Plus/Plus
Query 111563 AAATAGCAACATCCATCTTTATAGCAGGATGAGGTCTATAATTCTCCAATTCAAAGTCAT 111622
||| ||| | ||||| | |||| | ||||| || || ||| | | |||||| |
Sbjct 8862298 AAACAGCCATTTCCATTTCAATAGTCAGTTGAGGACTGTACCCCTCAATCTGAAAGTCTT 8862357
Query 111623 CAGCAACAAAATCGTCAATGCAAGCAACTCTTCGTTTAATTTTTAGTTTTGGAAAGGGGG 111682
|||| || || || || ||||| |||| ||||| || || || || ||
Sbjct 8862358 CAGCCTTGAAGTCATCCATTGTCTCAACTTTTCGAAGGATTTTGAGCTTCGGGAAAGGCC 8862417
Query 111683 TAGGCTTTCGGGTAAGCTGTAATTGTAAAGGCTGTATGTGATTTAAATAAACATGCGCAT 111742
| || | | | |||||| | || | ||| |||||||| | |||| ||| ||||
Sbjct 8862418 TTGGTTCTTGCTGAAGCTGCATTTTCAGCAGCTCAATGTGATTCAGGTAAATATGTGCAT 8862477
Query 111743 CTCCTATACAATGGATCAATTCCCAAGGCTCCAAACCAGTGATGTGTGCAATCATGTATG 111802
|||| | | ||| | || || | |||| | || |||||||||||||||||||| |
Sbjct 8862478 CTCCCAAAGTATGTACGAAGTCACCTGGCTTTAGTCCTGTGATGTGTGCAATCATGTAGG 8862537
Query 111803 TGAGTAGACTGTAACTAGCAATGTTAAATGGCACACCTAGGCCCATATCTCCCGATCTTT 111862
|||| || || || || ||||| || ||||| || |||||||| || || || || |
Sbjct 8862538 TGAGCAGGGCATAGCTGGCGATGTTGAAGGGCACGCCCAGGCCCATGTCCCCTGACCTCT 8862597
Query 111863 GATATAGCTGACATGATAGTTTATTTTGTGACACATAAAATTGACAAAGTACATGACAAG 111922
| || ||||| || || |||| | | ||| |||| || || || |||| || |
Sbjct 8862598 GGTACAGCTGGCAGGACAGTTCACCATTCACCACGCAAAACTGGCAGAGGGCATGGCACG 8862657
Query 111923 GAGGCAATGCCATCCCATTCATA---AAGGGTCCCCATGCACACATGATCATCCTTCTGC 111979
|||| | ||| || | ||| || ||| ||| || ||| || ||||||
Sbjct 8862658 GAGGGAGGGCCGTCAGAGGAATATCTTTTGGATTCCAGCCACTCAGGATGATTCTTCTGT 8862717
Query 111980 TGTAGCGATTATGTTCAATGTCGTGTATGACATTCAAGAGCTGGTCTATCCCTTTACCAG 112039
|| | | || || | ||| || ||||| || || ||||||| |||| ||| |
Sbjct 8862718 CGTTGGGGTTGGTTTGATTGT-GTCAATGACCTTTTGCAGTTGGTCTACTCCTTGACCTG 8862776
Query 112040 TATAATCCG---CCTGACATCCAGTGTATGTTGCCCCATAGTGTCTCCATTGGAATCCAT 112096
|||||| | ||| ||| | ||||| ||||||| | || |||| || || |||
Sbjct 8862777 AATAATCTGAATCCT--TATCTA-TGTATTCTGCCCCAAAATGCTTCCACTGAAAGACAT 8862833
Query 112097 AAATAGGCCCCAGATCTCC 112115
||| || || | ||| ||
Sbjct 8862834 AAACTGGGCCTAAATCCCC 8862852
>seq9
Length=27295742
Score = 84.2 bits (92), Expect = 2e-11
Identities = 114/159 (72%), Gaps = 0/159 (0%)
Strand=Plus/Plus
Query 111778 CCAGTGATGTGTGCAATCATGTATGTGAGTAGACTGTAACTAGCAATGTTAAATGGCACA 111837
|| ||||||||||| |||||||| ||||| || || || || ||||| || |||||
Sbjct 15743176 CCTGTGATGTGTGCGATCATGTAGGTGAGCAGGGCATAGCTGGCGATGTTGAAGGGCACG 15743235
Query 111838 CCTAGGCCCATATCTCCCGATCTTTGATATAGCTGACATGATAGTTTATTTTGTGACACA 111897
|| ||||||||||| || || || || || ||||| || || || | | | |||
Sbjct 15743236 CCCAGGCCCATATCCCCTGACCTCTGGTACAGCTGGCAGGACAGCTCACCATTCACCACG 15743295
Query 111898 TAAAATTGACAAAGTACATGACAAGGAGGCAATGCCATC 111936
|| || || || || |||| || ||||| | ||||||
Sbjct 15743296 TAGAACTGGCAGAGGGCATGGCACGGAGGGAGGGCCATC 15743334
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 391908421877629
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |