Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Mustela_20putorius_20furo_20[refseq_20GCF_5F000215625.1_202011-06-
02] 7,783 sequences; 2,410,879,678 total letters
Query= NC_028110.1
Length=171045
Score E
Sequences producing significant alignments: (Bits) Value
seq109 104 3e-17
seq44 100 3e-16
seq17 86.0 7e-12
seq141 84.2 2e-11
>seq109
Length=7041507
Score = 104 bits (114), Expect = 3e-17
Identities = 98/125 (78%), Gaps = 0/125 (0%)
Strand=Plus/Minus
Query 117305 GTGAAAATGTAACGAGAGCTTGCAGCATCCTTGCCACCAGCAAGACGCGTACCGAATTGT 117364
||||| ||||| |||| || |||| ||||||||||||| || | ||||| |||||
Sbjct 618028 GTGAAGATGTATCGAGGACTAGCAGAATCCTTGCCACCATGCAGCCTAGTACCAAATTGA 617969
Query 117365 CCACTCGGCTCCAAGAGGTTCAGGTTGTTGGCGCCCACAAAGTTTTGAGCCAAGTTGACA 117424
||| | |||| |||||||||||| || ||| |||||||| || |||||||| |||| |
Sbjct 617968 CCAATGGGCTGCAAGAGGTTCAGATTATTGCTACCCACAAAATTCTGAGCCAAATTGATA 617909
Query 117425 ATCGT 117429
|| ||
Sbjct 617908 ATGGT 617904
Score = 95.1 bits (104), Expect = 1e-14
Identities = 96/125 (77%), Gaps = 0/125 (0%)
Strand=Plus/Minus
Query 152029 GTGAAGATGTATCGGGAGCTGGCCGCATCCTTGCCACCTGCCAGCCGCGTTCCAAACTGT 152088
|||||||||||||| | || || | |||||||||||| ||||| || ||||| ||
Sbjct 618028 GTGAAGATGTATCGAGGACTAGCAGAATCCTTGCCACCATGCAGCCTAGTACCAAATTGA 617969
Query 152089 CCAGAGGGCTCGAGGAGGTTGAGGTTGTTGGCGCCCACGAAATTCTGAGCCAAATTCACA 152148
||| ||||| | |||||| || || ||| ||||| ||||||||||||||||| | |
Sbjct 617968 CCAATGGGCTGCAAGAGGTTCAGATTATTGCTACCCACAAAATTCTGAGCCAAATTGATA 617909
Query 152149 ATCGT 152153
|| ||
Sbjct 617908 ATGGT 617904
>seq44
Length=13086916
Score = 100 bits (110), Expect = 3e-16
Identities = 97/125 (78%), Gaps = 0/125 (0%)
Strand=Plus/Minus
Query 117305 GTGAAAATGTAACGAGAGCTTGCAGCATCCTTGCCACCAGCAAGACGCGTACCGAATTGT 117364
|||||||| ||||||| |||||||||||| ||||||||| ||| || || || || ||
Sbjct 8852086 GTGAAAATATAACGAGGGCTTGCAGCATCTTTGCCACCATGAAGCCGAGTTCCAAACTGA 8852027
Query 117365 CCACTCGGCTCCAAGAGGTTCAGGTTGTTGGCGCCCACAAAGTTTTGAGCCAAGTTGACA 117424
||| | |||| | | || | ||||||| ||||||||||| |||||||| || |||
Sbjct 8852026 CCAATAGGCTGAAGCAAATTAATGTTGTTGCTTCCCACAAAGTTCTGAGCCAAATTCACA 8851967
Query 117425 ATCGT 117429
|| ||
Sbjct 8851966 ATAGT 8851962
Score = 91.5 bits (100), Expect = 2e-13
Identities = 95/125 (76%), Gaps = 0/125 (0%)
Strand=Plus/Minus
Query 152029 GTGAAGATGTATCGGGAGCTGGCCGCATCCTTGCCACCTGCCAGCCGCGTTCCAAACTGT 152088
||||| || || || | ||| || ||||| |||||||| ||||| |||||||||||
Sbjct 8852086 GTGAAAATATAACGAGGGCTTGCAGCATCTTTGCCACCATGAAGCCGAGTTCCAAACTGA 8852027
Query 152089 CCAGAGGGCTCGAGGAGGTTGAGGTTGTTGGCGCCCACGAAATTCTGAGCCAAATTCACA 152148
||| |||| || | || | ||||||| ||||| || ||||||||||||||||||
Sbjct 8852026 CCAATAGGCTGAAGCAAATTAATGTTGTTGCTTCCCACAAAGTTCTGAGCCAAATTCACA 8851967
Query 152149 ATCGT 152153
|| ||
Sbjct 8851966 ATAGT 8851962
>seq17
Length=19722643
Score = 86.0 bits (94), Expect = 7e-12
Identities = 99/131 (76%), Gaps = 2/131 (2%)
Strand=Plus/Minus
Query 74772 TCATCTCTGCTTATCAATTCATTCGAAAACGAAAGGCCAGGCATAAGTCCACGCTTCTTC 74831
||||||||||| || | |||||| ||||||| ||||||||||| || || || |||||
Sbjct 6749544 TCATCTCTGCTGATAAGTTCATTGGAAAACGTGAGGCCAGGCATCAGGCCGCGTTTCTTG 6749485
Query 74832 AACCAAAAGAT-GGCACAGAAGGAACCACTGAAGAAGATGCCTTCGACACACGCAAAGGC 74890
| ||| || || | | || || |||||| |||||||| ||||| || || |||||
Sbjct 6749484 AGCCAGAATATCGACGCA-AAAGAACCAGAAAAGAAGATTCCTTCCACGGCAGCGAAGGC 6749426
Query 74891 GACAAGGCGTT 74901
|||| ||||
Sbjct 6749425 CACAACCCGTT 6749415
>seq141
Length=6018405
Score = 84.2 bits (92), Expect = 2e-11
Identities = 93/124 (75%), Gaps = 0/124 (0%)
Strand=Plus/Minus
Query 74770 CTTCATCTCTGCTTATCAATTCATTCGAAAACGAAAGGCCAGGCATAAGTCCACGCTTCT 74829
||||||||||||| || | |||||| ||||||| ||| |||||||| || || | ||||
Sbjct 2339026 CTTCATCTCTGCTGATGAGTTCATTGGAAAACGTAAGTCCAGGCATGAGACCTCTTTTCT 2338967
Query 74830 TCAACCAAAAGATGGCACAGAAGGAACCACTGAAGAAGATGCCTTCGACACACGCAAAGG 74889
| | |||||| || ||| || || || |||||| || ||||| ||| ||||| |
Sbjct 2338966 TTAGCCAAAATATAGCAGCAAAAGATCCTGAGAAGAAAATCCCTTCTACAGCAGCAAAAG 2338907
Query 74890 CGAC 74893
| ||
Sbjct 2338906 CTAC 2338903
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 547162762723400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |