Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mustela_20putorius_20furo_20[refseq_20GCF_5F000215625.1_202011-06- 02] 7,783 sequences; 2,410,879,678 total letters Query= NC_028379.1 Length=205896 Score E Sequences producing significant alignments: (Bits) Value seq171 190 3e-43 >seq171 Length=4644964 Score = 190 bits (210), Expect = 3e-43 Identities = 608/925 (66%), Gaps = 35/925 (4%) Strand=Plus/Plus Query 13683 GAAGAGGTCGAGTTTCCCATCGCCTACTCGATCGTGATCCACCACAAGATCGAGATGTTC 13742 ||||||| || ||||||||||| || || || ||| |||| ||||| || || ||| | Sbjct 1297605 GAAGAGGCAGAATTTCCCATCGCATATTCTATAGTGGTCCATCACAAAATTGAAATGCTT 1297664 Query 13743 GAGCGCCTCCTGAGGGCCATCTACGCCCCGCAGAACCTCTACTGCGTCCACGTGGACTCC 13802 || | |||||||||||||||||||| || ||||| |||||||| | ||||||||| Sbjct 1297665 GACAGGCTCCTGAGGGCCATCTACGCGCCCCAGAATTTCTACTGCATTCACGTGGACAGA 1297724 Query 13803 AAGTCCGGCGACGAGTTCAT--CCGGGGCGTCTCGGCCATCGCCAGGTGCTTCCCTAACG 13860 || || | || ||| | ||| || | || || |||||| |||||| ||| | Sbjct 1297725 AAATCAGAGGATTCCTTCTTGGCCGCGGTG-CT-GGGCATCGCGTCCTGCTTCAGTAATG 1297782 Query 13861 TGGCCCTGGCCCACCGGCTGCACGACGTGGTGTACGGCTCCTGGAGTCGCGTGCAGGCCG 13920 | | ||||| | |||| | |||||||||| ||| ||||| || || ||||||| Sbjct 1297783 TCTTCGTGGCCAGTCAGCTGGAGAGTGTGGTGTACGCCTCGTGGAGCCGGGTTCAGGCCG 1297842 Query 13921 ACCTCAGCTGCATGTCGGACCTGGAC-GCCTCCCCCGTCA-AGTGGAGGTACCTGCTCAA 13978 |||||| ||||||| |||||| || | | | || | |||| |||| || | || Sbjct 1297843 ACCTCAACTGCATGCAGGACCTCTACAGGAT--GAGGGCAGACTGGAAGTACTTGATAAA 1297900 Query 13979 CCTGTGCGGGATGGACTTCCCGCTCAAGACCAACCTGGAGATCGTGCGGGCGCTGAAGGC 14038 || ||||| ||||| || || | || |||||| |||| || || ||| ||| ||| | Sbjct 1297901 TCTCTGCGGTATGGATTTTCCTATTAAAACCAACTTGGAAATTGTCCGGAAGCTCAAGTC 1297960 Query 14039 CCTGGGCGGCAAGAACGCCCTGGAGAGCGAGGGCATGC---CCAACCACAAGCTGCACCG 14095 || || | ||| ||| || | |||| | |||| ||||| | || | | Sbjct 1297961 ACTAATGGGTGAAAACAACCTAGAAACCGAGAGGATGCCATCCAACAAAAA--AGAA--- 1298015 Query 14096 CATCAGGAAGAGGC---ACGTGGTGGCCAGCGGCGGCGTGGTGGTCAACACCGGCAGGAA 14152 | |||| | || | ||| | | ||| | || ||||| || | | Sbjct 1298016 -AGGTGGAAAAAGCATTATACGGTTGTTA---ACGGAAAGCTGACGAACACAGGGACCGA 1298071 Query 14153 CAAGGCCCCGCCGCCGCTCAGGATCCCCATCTTTGCGGGAAACGCTTACTTTGCGGTCAC 14212 ||| | ||| || || | ||| | || | || | || || |||| ||||| Sbjct 1298072 CAAAATGCAGCCCCCTCTTGAAACTCCCCTGTTCTCAGGCAGTGCCTATTTTGTGGTCAG 1298131 Query 14213 CCGGGAGTTCGTGGACTTCGTCCTCAAGGACGAGCCGGTGGCCCTGCTCATGCACTGGTT 14272 || ||| |||||| | || || || |||| | | | ||| | ||| Sbjct 1298132 TAGGAAGTACGTGGAGTATGTGCTAGAGAACGAAAAAATCCAAAAGTTTATGGAGTGGGC 1298191 Query 14273 CGAGGACACGTACAGCCCCGACGAGCACCTGTGGGCCACCGTGCAGAGAATGTACGGGAC 14332 | ||||| ||||||||||| ||| | || ||||||||| | ||||| | | | || Sbjct 1298192 AAAAGACACCTACAGCCCCGATGAGTATCTCTGGGCCACCATTCAGAGGA--TCCCAGAT 1298249 Query 14333 GCCCGGGGGGATCCCCGT--TCACGTC--AAGTACGACACCTCGGACATGTGGGCCAAGG 14388 | || || |||| || | | | | |||||||||| || |||||| || | | Sbjct 1298250 GTCC--CAGGCTCCCTGTCCTTAAGCCAGAAGTACGACATGTCTGACATGCACGCGATTG 1298307 Query 14389 TCAGGTTCGTCAAGTGGCACTACTACGAGGGGGATATCAAGAAAGGGGCCCTGTACCCGC 14448 ||||| ||||||||||| |||| |||||| ||| | || || |||| ||||| | Sbjct 1298308 CGAGGTTTGTCAAGTGGCAGTACTTCGAGGGTGATGTTTCCAAGGGTGCCCCCTACCCAC 1298367 Query 14449 CTTGCGACGGCATCCACGTCCACGCCATCTGCATCTTCGGGTCCGGCGACGTGAAGTGGC 14508 | ||| ||| ||||||| | || | ||| | |||||| | || ||| |||| ||| Sbjct 1298368 CCTGCAGTGGCGTCCACGTGCGTTCCGTGTGCGTGTTCGGGGCAGGTGACTTGAACTGGA 1298427 Query 14509 TGAAGAGCGTCCCGCACCTGTTCGCCAACAAGTTCGACGACGAGACG--GACGAGTTCGC 14566 || || | ||| |||| ||||||||||||||| ||| |||| ||| || || Sbjct 1298428 TGCTCCGCAAGCACCACTTGTTTGCCAACAAGTTCGAC-ACG-GACGTTGACCTCTTTGC 1298485 Query 14567 CGTGCGCTGTCTGGACGAGGACGTG 14591 | | | ||| |||| ||| || || Sbjct 1298486 CATCCAGTGTTTGGATGAGCACCTG 1298510 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658675112910080