Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Mustela_20putorius_20furo_20[refseq_20GCF_5F000215625.1_202011-06-
02] 7,783 sequences; 2,410,879,678 total letters
Query= NC_028461.1
Length=127011
Score E
Sequences producing significant alignments: (Bits) Value
seq63 233 2e-56
seq9 140 3e-28
seq70 91.5 1e-13
>seq63
Length=10485012
Score = 233 bits (258), Expect = 2e-56
Identities = 361/513 (70%), Gaps = 2/513 (0%)
Strand=Plus/Plus
Query 29839 GGGAAAGGGTCTGGGCTCCCTCTCGAGCTGAGTCTTCAGCGGTTCCACGTTATCCAGGTA 29898
|||||||| || || || || ||||| | |||||| | || | || || ||||||
Sbjct 8862408 GGGAAAGGC-CTTGGTTCTTGCTGAAGCTGCATTTTCAGCAGCTCAATGTGATTCAGGTA 8862466
Query 29899 GACGTGAGCGTCTCCCAGGTTGTGGACAAACTCTCCCGGTTCTAGCCCGGTGACGTGAGC 29958
| || || ||||||| | || || || || || || | ||| || |||| ||| ||
Sbjct 8862467 AATATGTGCATCTCCCAAAGTATGTACGAAGTCACCTGGCTTTAGTCCTGTGATGTGTGC 8862526
Query 29959 CATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGTACCCCGAGCCCCATGTC 30018
|||||||| ||||| || | |||||||||||||| ||||| || || || ||||||||
Sbjct 8862527 AATCATGTAGGTGAGCAGGGCATAGCTGGCGATGTTGAAGGGCACGCCCAGGCCCATGTC 8862586
Query 30019 CCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTCCGTCGCTCACGTAAAACTGACACAT 30078
||| ||||||||||| ||||| || || || || || | |||| ||||||| || |
Sbjct 8862587 CCCTGACCTCTGGTACAGCTGGCAGGACAGTTCACCATTCACCACGCAAAACTGGCAGAG 8862646
Query 30079 GGCGTGGCACGGAGGAAGAGCCATGAGGCCCAAGTCTTTGGGGTTCCAGGCGCACACGAT 30138
||| ||||||||||| || ||| | || | ||||| || |||||| | | || |||
Sbjct 8862647 GGCATGGCACGGAGGGAGGGCCGTCAGAGGAATATCTTTTGGATTCCAGCCACTCAGGAT 8862706
Query 30139 GATGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTCCACGGCGTTTTGCAGCTGATCCAC 30198
||| | ||||| | |||||| | |||| ||| | | | |||||||| || || ||
Sbjct 8862707 GATTCTTCTGTCGTTGGGGTTGGT-TTGATTGTGTCAATGACCTTTTGCAGTTGGTCTAC 8862765
Query 30199 CCCCATCCCCGAGTAGTCTGCCCTCATGTCCGTGTACTCTGCTCCGAAATGCCTCCACTG 30258
|| || || || |||| | | || |||| ||||| || |||||| |||||||
Sbjct 8862766 TCCTTGACCTGAATAATCTGAATCCTTATCTATGTATTCTGCCCCAAAATGCTTCCACTG 8862825
Query 30259 GAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAGCCCCTCTTGTCCAA 30318
|| | || || || || | || || |||| |||| ||| ||| ||||| |
Sbjct 8862826 AAAGACATAAACTGGGCCTAAATCCCCTTCTTTTCTGTTGGAGAACCCCAAGCTGTCCTA 8862885
Query 30319 AAAGTCTCTGGAACCGTTGGCGTCCCAGATCTT 30351
||||||| || || ||||| |||||||| ||
Sbjct 8862886 GAAGTCTCGAGACCCATTGGCATCCCAGATTTT 8862918
>seq9
Length=27295742
Score = 140 bits (154), Expect = 3e-28
Identities = 130/165 (79%), Gaps = 0/165 (0%)
Strand=Plus/Plus
Query 29941 TAGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGG 30000
||| || |||| ||| || |||||||| ||||| || | |||||||||||||| |||||
Sbjct 15743172 TAGGCCTGTGATGTGTGCGATCATGTAGGTGAGCAGGGCATAGCTGGCGATGTTGAAGGG 15743231
Query 30001 TACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTCCGTCGCT 30060
|| || || ||||| ||||| ||||||||||| ||||| || || ||||| || |
Sbjct 15743232 CACGCCCAGGCCCATATCCCCTGACCTCTGGTACAGCTGGCAGGACAGCTCACCATTCAC 15743291
Query 30061 CACGTAAAACTGACACATGGCGTGGCACGGAGGAAGAGCCATGAG 30105
|||||| ||||| || | ||| ||||||||||| || ||||| ||
Sbjct 15743292 CACGTAGAACTGGCAGAGGGCATGGCACGGAGGGAGGGCCATCAG 15743336
Score = 95.1 bits (104), Expect = 1e-14
Identities = 117/160 (73%), Gaps = 0/160 (0%)
Strand=Plus/Plus
Query 30231 TGTACTCTGCTCCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTT 30290
|||| ||||| || |||||||||||||| || || || || || || | || || ||||
Sbjct 15745768 TGTATTCTGCCCCAAAATGCCTCCACTGAAAGCCATAAACTGGGCCTAAATCCCCTTCTT 15745827
Query 30291 CCCTGTGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCT 30350
| |||| ||| ||| ||||||| ||||||| || || ||||| |||||||| |
Sbjct 15745828 CTCTGTTGGAGAATCCCAGGCTGTCCAAGAAGTCTCGAGACCCATTGGCATCCCAGATTT 15745887
Query 30351 TTACCCCCTTCTCAGAGAGCTCTTTGGAGTTTGTGGACCC 30390
| || ||||| ||| || || || | |||||| || ||
Sbjct 15745888 TCACTCCCTTGGAAGACAGTTCCTTAGCGTTTGTAGATCC 15745927
>seq70
Length=9335154
Score = 91.5 bits (100), Expect = 1e-13
Identities = 85/108 (79%), Gaps = 0/108 (0%)
Strand=Plus/Minus
Query 110401 TTAAGCTCCCTGCTGAGGACTACGTTTATCCTGTCTCTCAGAGGTCTATTCTTTTCGGGG 110460
|| || || |||||||| |||| || || || || | | ||||| |||||| || ||
Sbjct 9239470 TTGAGGTCTCTGCTGAGAACTAAATTAATTCTATCCTTTAAAGGTCGATTCTTCTCAGGA 9239411
Query 110461 ATGGAGAACCAAGTCTTTCTACCCATTATCACCACGTTCTGCTTGCCT 110508
|| |||||||| |||||||||||||| ||||||| |||||| || |||
Sbjct 9239410 ATAGAGAACCATGTCTTTCTACCCATAATCACCAAGTTCTGTTTACCT 9239363
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 406271859300036
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |