Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Mustela_20putorius_20furo_20[refseq_20GCF_5F000215625.1_202011-06-
02] 7,783 sequences; 2,410,879,678 total letters
Query= NC_028491.1
Length=98392
Score E
Sequences producing significant alignments: (Bits) Value
seq161 109 3e-19
seq323 104 1e-17
seq101 100 2e-16
seq39 100 2e-16
seq50 82.4 5e-11
>seq161
Length=5000004
Score = 109 bits (120), Expect = 3e-19
Identities = 164/233 (70%), Gaps = 0/233 (0%)
Strand=Plus/Minus
Query 34479 GCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGA 34538
||| || || ||||| | |||| |||||||| ||| || || ||||| ||||| ||
Sbjct 410117 GCCACCCCTCAGACGGAGAACCAGGTGGAGAGTTGACTCTTTCTGGATGTTGTAATCAGA 410058
Query 34539 AAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGG 34598
||| || || | ||||| || || || || ||||| || | | ||| ||||| || ||
Sbjct 410057 AAGAGTGCGGCCATCTTCTAGCTGCTTGCCAGCAAAGATAAGCCTCTGCTGGTCAGGGGG 409998
Query 34599 CACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATAAAATTGTGTCTTCGCTCTCCAC 34658
| |||||||| ||| |||||| ||| | | || ||||| | ||||||
Sbjct 409997 GATGCCCTCCTTATCTTGGATCTTGGCTTTCACATTTTCGATGGTGTCACTGGGCTCCAC 409938
Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATGTTGA 34711
|||| ||| || || || ||||| | || ||||| ||||||||||| ||||
Sbjct 409937 CTCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAAATCTGCATTTTGA 409885
>seq323
Length=1159590
Score = 104 bits (114), Expect = 1e-17
Identities = 165/234 (71%), Gaps = 2/234 (1%)
Strand=Plus/Plus
Query 34479 GCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGA 34538
||| || || || |||| |||| || |||||| ||| || || ||||| ||||| ||
Sbjct 303392 GCCACCCCTCAGGCGCAGGACCAGGTGCAGAGTGGACTCTTTCTGGATGTTGTAATCAGA 303451
Query 34539 AAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGG 34598
||| || || | ||||| || || || || ||||| || | | ||| ||||| || ||
Sbjct 303452 AAGAGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATAAGCCTCTGCTGGTCGGGGGG 303511
Query 34599 CACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATAAA-ATTGTGTCTTCGCTCTCCA 34657
| |||||||| ||| |||||| | || || | || ||||| | |||||
Sbjct 303512 GATGCCCTCCTTATCTTGGATCTTG-GCCTTCACATTCTCGATGGTGTCACTGGGCTCCA 303570
Query 34658 CTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATGTTGA 34711
| |||| ||| || || || ||||| | || ||||| ||||||||||| ||||
Sbjct 303571 CCTCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAAATCTGCATTTTGA 303624
>seq101
Length=7325712
Score = 100 bits (110), Expect = 2e-16
Identities = 165/237 (70%), Gaps = 11/237 (5%)
Strand=Plus/Plus
Query 34479 GCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGA 34538
||| || || || |||| |||| || |||||| ||| || || ||||| ||||| ||
Sbjct 127796 GCCACCCCTCAGGCGCAGGACCAGGTGCAGAGTGGACTCTTTCTGGATGTTGTAATCAGA 127855
Query 34539 AAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGG 34598
||| || || | ||||| || || || || ||||| || | | ||| ||||| || ||
Sbjct 127856 AAGAGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATAAGCCTCTGCTGGTCGGGGGG 127915
Query 34599 CACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATAAAATT----GTGTCTTCGCTCT 34654
| ||||| |||||| |||||| | || || ||| ||||| | ||
Sbjct 127916 GATGCCCTCTTTGTCTTGGATCTTG-GCCTTCAC------ATTCTCGGTGTCACTGAGCT 127968
Query 34655 CCACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATGTTGA 34711
|||| |||| ||| || || || ||||| | || ||||| ||||||||||| ||||
Sbjct 127969 CCACCTCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAAATCTGCATTTTGA 128025
>seq39
Length=13401118
Score = 100 bits (110), Expect = 2e-16
Identities = 161/229 (70%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 34479 GCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGA 34538
||| ||||| || || | |||| || ||||| |||||| || ||||| || || ||
Sbjct 1513511 GCCCCCTCTGAGGCGGAGGACCAGGTGCAGAGTCGACTCCTTCTGGATGTTGTAGTCGGA 1513452
Query 34539 AAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGG 34598
|| || ||| | || || || ||||| || ||||| || || | ||| ||||| || ||
Sbjct 1513451 CAGGGTGCGCCCATCCTCCAGCTGTTTCCCAGCAAAGATCAACCTCTGCTGGTCAGGGGG 1513392
Query 34599 CACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCA 34657
| ||||||||||| |||| || | || ||| | || ||||| | |||||
Sbjct 1513391 GATGCCCTCCTTGTCCTGGATC-TTCGCCTTGACGTTCTCGATGGTGTCACTGGGCTCCA 1513333
Query 34658 CTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
| |||| ||| || || ||||| || | || ||||| || ||||||||
Sbjct 1513332 CCTCCAGGGTGATGGTCTTACCCGTCAGGGTCTTCACGAAGATCTGCAT 1513284
>seq50
Length=12588045
Score = 82.4 bits (90), Expect = 5e-11
Identities = 160/234 (68%), Gaps = 2/234 (1%)
Strand=Plus/Plus
Query 34479 GCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGA 34538
||| || || | |||| |||| || || ||| ||| || || ||||| ||||| ||
Sbjct 11770629 GCCACCCCTCCGGCGCAGGACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAATCAGA 11770688
Query 34539 AAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGG 34598
||| || | | ||||| || || || |||||||| || | | ||| || || | ||
Sbjct 11770689 AAGAGTGTGGCCATCTTCCAGCTGCTTGCCGGCAAAGATAAGCCTCTGCTGATCGTGGGG 11770748
Query 34599 CACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATAAA-ATTGTGTCTTCGCTCTCCA 34657
| ||||| || ||| |||||| | || || | || ||||| | | |||||
Sbjct 11770749 GATGCCCTCTTTATCTTGGATCTTG-GCCTTCACATTCTCGATGGTGTCATTGGGCTCCA 11770807
Query 34658 CTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATGTTGA 34711
| | || ||| || || || ||||| | || ||||| ||||||||||| ||||
Sbjct 11770808 CCTTCAAGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAAATCTGCATTTTGA 11770861
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 314699746225439
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |