Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mustela_20putorius_20furo_20[refseq_20GCF_5F000215625.1_202011-06- 02] 7,783 sequences; 2,410,879,678 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq65 129 5e-25 seq2 116 3e-21 seq50 114 1e-20 seq323 104 2e-17 seq101 98.7 9e-16 seq161 96.9 3e-15 seq125 95.1 1e-14 seq39 89.7 4e-13 >seq65 Length=10028950 Score = 129 bits (142), Expect = 5e-25 Identities = 167/231 (72%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046 ||||||||| || || || || |||||||||||| | || ||||| || ||||| || Sbjct 4317955 CATGCAGATCTTCGTGAAGACCCTGACCGGCAAGACCATCACTCTGGAGGTGGAGCCCAG 4318014 Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106 ||| | ||||| | || || | || || ||||||||||||||||| || || || || Sbjct 4318015 TGACACCATTGAAAATGTAAAGGACAAGATCCAAGACAAAGAAGGCATCCCCCCTGACCA 4318074 Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166 ||| | | || | || ||||| || | ||||| | || |||| |||||||| Sbjct 4318075 GCAGAGGCTTATCTTTGCTGGCAAGCAGCTCGAAGATGGCCGCACTCTTTCTGATTACAA 4318134 Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 ||| || || ||||| ||| | ||| |||| |||| || |||||||||| Sbjct 4318135 CATCCAGAAAGAGTCCACCCTGCATCTGGTCCTGCGCCTGAGGGGTGGCAT 4318185 Score = 98.7 bits (108), Expect = 9e-16 Identities = 159/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046 ||||||||| || || || || ||||| |||||| | || || || || ||||| || Sbjct 4318183 CATGCAGATCTTCGTGAAGACCCTGACTGGCAAGACCATCACCCTGGAGGTGGAGCCTAG 4318242 Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106 ||| | ||||| | || || || || ||||| || || ||||| || || || || Sbjct 4318243 TGACACCATTGAAAATGTAAAGGCCAAGATCCAAGATAAGGAGGGCATCCCCCCTGACCA 4318302 Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166 ||| | | || | || ||||| || | ||||| | || |||| |||||||| Sbjct 4318303 GCAGAGGCTTATCTTTGCAGGCAAGCAGCTAGAAGATGGCCGCACTCTTTCTGATTACAA 4318362 Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGC 27215 ||| || || ||||| || | || ||||| | |||||| |||||||| Sbjct 4318363 CATCCAGAAAGAGTCAACTCTCCACCTGGTTCTCCGTTTGAGGGGTGGC 4318411 >seq2 Length=40953715 Score = 116 bits (128), Expect = 3e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || |||||||| || || || ||| | |||||||| || || ||||| || Sbjct 19232597 ATGCAGATTTTCGTAAAAACCCTTACGGGGAAGACCATTACTCTCGAGGTTGAACCCTCG 19232538 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || | || || | || || ||| ||||| ||||| ||||| || || || ||||| Sbjct 19232537 GATACAATAGAAAATGTGAAGGCAAAGATTCAGGACAAGGAAGGAATTCCTCCTGATCAG 19232478 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||| | | || | || ||||| ||| ||||||| | || | || || |||||| Sbjct 19232477 CAGAGACTGATCTTTGCTGGCAAGCAACTGGAAGATGGACGTACTTTGTCTGACTACAAC 19232418 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214 |||||||||||||| || | ||| | || ||| | | || ||||| Sbjct 19232417 ATTCAAAAGGAGTCCACTCTTCATCTTGTGTTGAGACTTCGTGGTGG 19232371 >seq50 Length=12588045 Score = 114 bits (126), Expect = 1e-20 Identities = 166/232 (72%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAG-TGGAACCGTC 27046 |||||||| || || || || |||||||||||| | || || ||||||| |||| || Sbjct 11770856 ATGCAGATTTTCGTGAAGACCCTGACCGGCAAGACCATCAC-CTTGAAGGTGGAGCCCAA 11770798 Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106 ||| | || |||| || || || || ||||| ||||| ||||| || | |||||| Sbjct 11770797 TGACACCATCGAGAATGTGAAGGCCAAGATCCAAGATAAAGAGGGCATCCCCCACGATCA 11770738 Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166 ||| | | || | |||||||| || ||||||| | || |||| |||||||| Sbjct 11770737 GCAGAGGCTTATCTTTGCCGGCAAGCAGCTGGAAGATGGCCACACTCTTTCTGATTACAA 11770678 Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCATA 27218 ||| || || ||||| ||| | || |||| |||| | ||||||||||| Sbjct 11770677 CATCCAGAAAGAGTCCACCCTGCACCTGGTCCTGCGCCGGAGGGGTGGCATA 11770626 Score = 104 bits (114), Expect = 2e-17 Identities = 161/229 (70%), Gaps = 1/229 (0%) Strand=Plus/Minus Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046 ||||||||| || || || || ||||| |||||| | || ||||| || ||||| || Sbjct 11770401 CATGCAGATCTTCGTGAAGACCCTGACTGGCAAGACCATCACTCTGGAGGTGGAGCCCAG 11770342 Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106 ||| | ||||| | || || || || ||||| ||||| ||||| || | || || Sbjct 11770341 TGACACCATTGAAAATGTAAAGGCCAAGATCCAAGATAAAGAGGGCATCCC-CGTGACCA 11770283 Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166 ||| | | || | |||||||| || | ||||| | | || |||| |||||||| Sbjct 11770282 GCAGAGGCTTATCTTTGCCGGCAAGCAGCTAGAAGATGGCTGCACTCTTTCTGATTACAA 11770223 Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGC 27215 ||| || || ||||| || | || ||||| | ||| || |||||||| Sbjct 11770222 CATCCAGAAAGAGTCAACTCTCCACCTGGTTCTCCGTCTGAGGGGTGGC 11770174 >seq323 Length=1159590 Score = 104 bits (114), Expect = 2e-17 Identities = 161/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || || |||||||||||| | || || || || ||||| || Sbjct 303619 ATGCAGATTTTCGTGAAGACCCTGACCGGCAAGACCATCACCCTGGAGGTGGAGCCCAGT 303560 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || |||| || || || || ||||| || || ||||| || ||||| || Sbjct 303559 GACACCATCGAGAATGTGAAGGCCAAGATCCAAGATAAGGAGGGCATCCCCCCCGACCAG 303500 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||| | | || | || ||||| || ||||||| | || |||| ||||||||| Sbjct 303499 CAGAGGCTTATCTTTGCTGGCAAGCAGCTGGAAGATGGCCGCACTCTTTCTGATTACAAC 303440 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || || || ||||| || | || |||| |||| || |||||||||| Sbjct 303439 ATCCAGAAAGAGTCCACTCTGCACCTGGTCCTGCGCCTGAGGGGTGGCAT 303390 >seq101 Length=7325712 Score = 98.7 bits (108), Expect = 9e-16 Identities = 160/230 (70%), Gaps = 3/230 (1%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || || |||||||||||| | || || || || ||||| | Sbjct 128020 ATGCAGATTTTCGTGAAGACCCTGACCGGCAAGACCATCACCCTGGAGGTGGAGCTCAGT 127961 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | |||| || || || || ||||||||||| ||||| || ||||| || Sbjct 127960 GACACC---GAGAATGTGAAGGCCAAGATCCAAGACAAAGAGGGCATCCCCCCCGACCAG 127904 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||| | | || | || ||||| || ||||||| | || |||| ||||||||| Sbjct 127903 CAGAGGCTTATCTTTGCTGGCAAGCAGCTGGAAGATGGCCGCACTCTTTCTGATTACAAC 127844 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || || || ||||| || | || |||| |||| || |||||||||| Sbjct 127843 ATCCAGAAAGAGTCCACTCTGCACCTGGTCCTGCGCCTGAGGGGTGGCAT 127794 Score = 93.3 bits (102), Expect = 4e-14 Identities = 159/231 (69%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046 ||||||||| || || || || ||||| |||||| | || ||||| || ||||| || Sbjct 127796 CATGCAGATCTTCGTGAAGACCCTGACTGGCAAGACCATCACTCTGGAGGTGGAGCCTAG 127737 Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106 ||| | ||||| | || ||| || || ||||| || || ||||| || || || || Sbjct 127736 TGACACCATTGAAAATGTGAAAGCCAAGATCCAAGATAAGGAGGGCATCCCCCCTGACCA 127677 Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166 ||| | | || | || ||||| || ||||||| | || |||| |||||||| Sbjct 127676 GCAGAGGCTTATCTTTGCTGGCAAGCAGCTGGAAGATGGCCGCACTCTTTCTGATTACAA 127617 Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 ||| || || || || || | ||| |||| | | || | |||||||| Sbjct 127616 CATCCAGAACGAATCCACTCTGCATCTGGTCCTTTGGCTGAGAGGTGGCAT 127566 >seq161 Length=5000004 Score = 96.9 bits (106), Expect = 3e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || || |||||||||||| | || || || || ||||| || Sbjct 409890 ATGCAGATTTTCGTGAAGACCCTGACCGGCAAGACCATCACCCTGGAGGTGGAGCCCAGT 409949 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || || | || ||| || || ||||| || || ||||| || || || || Sbjct 409950 GACACCATCGAAAATGTGAAAGCCAAGATCCAAGATAAGGAGGGCATCCCCCCTGACCAG 410009 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||| | | || | || ||||| || | ||||| | || |||| ||||||||| Sbjct 410010 CAGAGGCTTATCTTTGCTGGCAAGCAGCTAGAAGATGGCCGCACTCTTTCTGATTACAAC 410069 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGC 27215 || || || ||||| || | || ||||| | ||| || |||||||| Sbjct 410070 ATCCAGAAAGAGTCAACTCTCCACCTGGTTCTCCGTCTGAGGGGTGGC 410117 Score = 96.9 bits (106), Expect = 3e-15 Identities = 157/225 (70%), Gaps = 1/225 (0%) Strand=Plus/Plus Query 26991 CAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCCGAC 27050 ||||| || || || || ||||| |||||| | || ||||| || ||||| || ||| Sbjct 410121 CAGATCTTCGTGAAGACCCTGACTGGCAAGACCATCACTCTGGAGGTGGAGCCCAGTGAC 410180 Query 27051 TCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAACAG 27110 | ||||| | || || || || ||||| ||||| ||||| || | || || ||| Sbjct 410181 ACCATTGAAAATGTAAAGGCCAAGATCCAAGATAAAGAGGGCATCCC-CGTGACCAGCAG 410239 Query 27111 CGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAACATT 27170 | | || | |||||||| || | ||||| | | || |||| ||||||||||| Sbjct 410240 AGGCTTATCTTTGCCGGCAAGCAGCTAGAAGATGGCTGCACTCTTTCTGATTACAACATC 410299 Query 27171 CAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGC 27215 || || ||||| || | || ||||| | ||| || |||||||| Sbjct 410300 CAGAAAGAGTCAACTCTCCACCTGGTTCTCCGTCTGAGGGGTGGC 410344 >seq125 Length=6462000 Score = 95.1 bits (104), Expect = 1e-14 Identities = 159/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || | || || ||||| |||||| | || || ||||| || || || | Sbjct 2357655 ATGCAGATCTTCATGAAGACCCTGACAGGCAAGACCATCACCCTTGAGGTTGAGCCCAGC 2357596 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | ||||||| |||||| ||||| ||||||| || ||||| || || ||||| Sbjct 2357595 GACACCATTGAGAATGTCAAAGCCAAAATCGAAGACAAGGAGGGCATCCCCCCTGATCAG 2357536 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||| || | || | | |||||||| ||||||| | | | || ||| |||| Sbjct 2357535 CAGTGTCTGATTTTTGTGGGCAAACAGCTGGAAGATGGCCGCGCTCTGTCAGATCACAAT 2357476 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || || || ||||| || | || ||| | || | ||||||||||| Sbjct 2357475 ATCCAGAAAGAGTCCGCCCTGCACCTGGAGCTTCGCCTCCGGGGTGGCAT 2357426 >seq39 Length=13401118 Score = 89.7 bits (98), Expect = 4e-13 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || || ||||| || ||| | || || || || ||||| || Sbjct 1513284 ATGCAGATCTTCGTGAAGACCCTGACGGGTAAGACCATCACCCTGGAGGTGGAGCCCAGT 1513343 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || |||| ||||| || || || ||||| || ||||| || || || || Sbjct 1513344 GACACCATCGAGAACGTCAAGGCGAAGATCCAGGACAAGGAGGGCATCCCCCCTGACCAG 1513403 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||| | || || | || || ||||| |||| || | ||| | ||||| |||||| Sbjct 1513404 CAGAGGTTGATCTTTGCTGGGAAACAGCTGGAGGATGGGCGCACCCTGTCCGACTACAAC 1513463 Query 27168 ATTCAAAAGGAGTCGAC 27184 || || ||||||||||| Sbjct 1513464 ATCCAGAAGGAGTCGAC 1513480 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434876087876160