Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mustela_20putorius_20furo_20[refseq_20GCF_5F000215625.1_202011-06- 02] 7,783 sequences; 2,410,879,678 total letters Query= NC_029132.1 Length=140122 Score E Sequences producing significant alignments: (Bits) Value seq63 269 2e-67 seq9 159 3e-34 >seq63 Length=10485012 Score = 269 bits (298), Expect = 2e-67 Identities = 419/595 (70%), Gaps = 3/595 (1%) Strand=Plus/Plus Query 6425 TGCGGCCGGTACCCTTCCAACACGAAGTCCTCGCTCCTAAAGTCATCGATTGAGGTGACG 6484 || || | |||||| || | | ||||| || | | |||||||| |||| || Sbjct 8862327 TGAGGACTGTACCCCTCAATCTGAAAGTCTTCAGCCTTGAAGTCATCCATTGTCTCAACT 8862386 Query 6485 GCTCGAATAATTTTGAGCTGGGGGAACGGTCGGGGCTCTCGTTGCAGCTGGATCCGGAGC 6544 ||||| |||||||||| ||||| || | || ||| | || ||||| || ||| Sbjct 8862387 TTTCGAAGGATTTTGAGCTTCGGGAAAGGCCTTGGTTCTTGCTGAAGCTGCATTTTCAGC 8862446 Query 6545 CGCTCGATGTGGTTCAGGTAGATATGCGCATCCCCCAACGTATGCACCAGCTCCCCAGGA 6604 |||| ||||| |||||||| ||||| ||||| ||||| ||||| || | || || || Sbjct 8862447 AGCTCAATGTGATTCAGGTAAATATGTGCATCTCCCAAAGTATGTACGAAGTCACCTGGC 8862506 Query 6605 ACCAACCCCACGACATGAGCGATCATGTACGTGAGCAGAGCGTAACTAGCAATGTTGAAC 6664 | || || || || |||||||| |||||||| || || || || |||||||| Sbjct 8862507 TTTAGTCCTGTGATGTGTGCAATCATGTAGGTGAGCAGGGCATAGCTGGCGATGTTGAAG 8862566 Query 6665 GGCACCCCTAACCCCATGTCTCCCGATCGTTGATAGAGCTGGCAGGACAGCTCCCCATTC 6724 ||||| || | |||||||| || || | || || |||||||||||||| || |||||| Sbjct 8862567 GGCACGCCCAGGCCCATGTCCCCTGACCTCTGGTACAGCTGGCAGGACAGTTCACCATTC 8862626 Query 6725 GCGACGTAGAATTGGCAGAGGGTGTGGCACGGGGGGAGCGCCATCAGAGGGAGATCCTTC 6784 | ||| | || |||||||||| |||||||| ||||| ||| ||||||| | ||| || Sbjct 8862627 ACCACGCAAAACTGGCAGAGGGCATGGCACGGAGGGAGGGCCGTCAGAGGAATATCTTTT 8862686 Query 6785 GGGTTCCACGCGCACATCACGATCCTTCTGTCATCAGGGTTCCGCTTCAAGGTGTCGATC 6844 || ||||| | | || | ||| |||||||| | ||||| | || | ||||| || Sbjct 8862687 GGATTCCAGCCACTCAGGATGATTCTTCTGTCGTTGGGGTT-GGTTTGATTGTGTCAATG 8862745 Query 6845 ACGTACTGCAGCTGGTCCGCTCCCTGTCCCGAATAGTCCGCTTCGCTCCCCCGATACTCC 6904 || | ||||| ||||| |||| || || ||||| || | || | | || || Sbjct 8862746 ACCTTTTGCAGTTGGTCTACTCCTTGACCTGAATAATCTGAATCCTTATCTATGTATTCT 8862805 Query 6905 GCCCCAAAGTGTCTCCACTGGAACCCGTAGACCGGGCCCAAGTCGCCCTCCTCCCGAGAT 6964 |||||||| || ||||||| || | || || ||||| || || |||| || | | Sbjct 8862806 GCCCCAAAATGCTTCCACTGAAAGACATAAACTGGGCCTAAATC-CCCTTCTTTTCTGTT 8862864 Query 6965 GG-GAACCCCCGCTTGTCCAGAAAGTCTCGAGACCCGTGAGCGTCCCAGATCTTC 7018 || ||||||| ||||| |||||||||||||| | || |||||||| ||| Sbjct 8862865 GGAGAACCCCAAGCTGTCCTAGAAGTCTCGAGACCCATTGGCATCCCAGATTTTC 8862919 Score = 269 bits (298), Expect = 2e-67 Identities = 419/595 (70%), Gaps = 3/595 (1%) Strand=Plus/Minus Query 34327 GAAGATCTGGGACGCTCACGGGTCTCGAGACTTTCTGGACAAGCGGGGGTTC-CCATCTC 34385 ||| |||||||| || | |||||||||||||| ||||| ||||||| ||| | Sbjct 8862919 GAAAATCTGGGATGCCAATGGGTCTCGAGACTTCTAGGACAGCTTGGGGTTCTCCAACAG 8862860 Query 34386 GGGAGGAGGGCGACTTGGGCCCGGTCTACGGGTTCCAGTGGAGACACTTTGGGGCGGAGT 34445 || |||| || || ||||| || || | || ||||||| || |||||||| || | Sbjct 8862859 AAAAGAAGGG-GATTTAGGCCCAGTTTATGTCTTTCAGTGGAAGCATTTTGGGGCAGAAT 8862801 Query 34446 ATCGGGGGAGCGAAGCGGACTATTCGGGACAGGGAGCGGACCAGCTGCAGTACGTGATCG 34505 | | | || | || ||||| || || |||| ||||| ||||| | || || | Sbjct 8862800 ACATAGATAAGGATTCAGATTATTCAGGTCAAGGAGTAGACCAACTGCAAAAGGTCATTG 8862741 Query 34506 ACACCTTGAAGCGGAACCCTGATGACAGAAGGATCGTGATGTGCGCGTGGAACCCGAAGG 34565 |||| | || | ||||| | |||||||| ||| | || | | ||||| || || | Sbjct 8862740 ACACAATCAAACC-AACCCCAACGACAGAAGAATCATCCTGAGTGGCTGGAATCCAAAAG 8862682 Query 34566 ATCTCCCTCTGATGGCGCTCCCCCCGTGCCACACCCTCTGCCAATTCTACGTCGCGAATG 34625 || | ||||||| ||| ||||| |||||||| |||||||||| || | ||| | ||||| Sbjct 8862681 ATATTCCTCTGACGGCCCTCCCTCCGTGCCATGCCCTCTGCCAGTTTTGCGTGGTGAATG 8862622 Query 34626 GGGAGCTGTCCTGCCAGCTCTATCAACGATCGGGAGACATGGGGTTAGGGGTGCCGTTCA 34685 | || |||||||||||||| || || | || || |||||||| | || ||||| |||| Sbjct 8862621 GTGAACTGTCCTGCCAGCTGTACCAGAGGTCAGGGGACATGGGCCTGGGCGTGCCCTTCA 8862562 Query 34686 ACATTGCTAGTTACGCTCTGCTCACGTACATGATCGCTCATGTCGTGGGGTTGGTTCCTG 34745 |||| || || || || |||||||| |||||||| || || || || | || | Sbjct 8862561 ACATCGCCAGCTATGCCCTGCTCACCTACATGATTGCACACATCACAGGACTAAAGCCAG 8862502 Query 34746 GGGAGCTGGTGCATACGTTGGGGGATGCGCATATCTACCTGAACCACATCGAGCGGCTCC 34805 | || | || ||||| ||||| ||||| ||||| |||||||| ||||| |||| ||| Sbjct 8862501 GTGACTTCGTACATACTTTGGGAGATGCACATATTTACCTGAATCACATTGAGCTGCTGA 8862442 Query 34806 GGATCCAGCTGCAACGAGAGCCCCGACCGTTCCCCCAGCTCAAAATTATTCGAGCCGTCA 34865 || ||||| || | ||| || | || ||||| |||||||||| ||||| || Sbjct 8862441 AAATGCAGCTTCAGCAAGAACCAAGGCCTTTCCCGAAGCTCAAAATCCTTCGAAAAGTTG 8862382 Query 34866 CCTCAATCGATGACTTTAGGAGCGAGGACTTCGTGTTGGAAGGGTACCGGCCGCA 34920 |||| |||||||| | | || ||||| | | || |||||| | || || Sbjct 8862381 AGACAATGGATGACTTCAAGGCTGAAGACTTTCAGATTGAGGGGTACAGTCCTCA 8862327 >seq9 Length=27295742 Score = 159 bits (176), Expect = 3e-34 Identities = 132/161 (82%), Gaps = 0/161 (0%) Strand=Plus/Plus Query 6620 TGAGCGATCATGTACGTGAGCAGAGCGTAACTAGCAATGTTGAACGGCACCCCTAACCCC 6679 || ||||||||||| |||||||| || || || || |||||||| ||||| || | ||| Sbjct 15743185 TGTGCGATCATGTAGGTGAGCAGGGCATAGCTGGCGATGTTGAAGGGCACGCCCAGGCCC 15743244 Query 6680 ATGTCTCCCGATCGTTGATAGAGCTGGCAGGACAGCTCCCCATTCGCGACGTAGAATTGG 6739 || || || || | || || ||||||||||||||||| |||||| | |||||||| ||| Sbjct 15743245 ATATCCCCTGACCTCTGGTACAGCTGGCAGGACAGCTCACCATTCACCACGTAGAACTGG 15743304 Query 6740 CAGAGGGTGTGGCACGGGGGGAGCGCCATCAGAGGGAGATC 6780 ||||||| |||||||| ||||| ||||||||||| ||||| Sbjct 15743305 CAGAGGGCATGGCACGGAGGGAGGGCCATCAGAGGAAGATC 15743345 Score = 159 bits (176), Expect = 3e-34 Identities = 132/161 (82%), Gaps = 0/161 (0%) Strand=Plus/Minus Query 34565 GATCTCCCTCTGATGGCGCTCCCCCCGTGCCACACCCTCTGCCAATTCTACGTCGCGAAT 34624 ||||| ||||||||||| ||||| |||||||| |||||||||| |||||||| | |||| Sbjct 15743345 GATCTTCCTCTGATGGCCCTCCCTCCGTGCCATGCCCTCTGCCAGTTCTACGTGGTGAAT 15743286 Query 34625 GGGGAGCTGTCCTGCCAGCTCTATCAACGATCGGGAGACATGGGGTTAGGGGTGCCGTTC 34684 || ||||||||||||||||| || || | || || || ||||| | || ||||| ||| Sbjct 15743285 GGTGAGCTGTCCTGCCAGCTGTACCAGAGGTCAGGGGATATGGGCCTGGGCGTGCCCTTC 15743226 Query 34685 AACATTGCTAGTTACGCTCTGCTCACGTACATGATCGCTCA 34725 ||||| || || || || |||||||| ||||||||||| || Sbjct 15743225 AACATCGCCAGCTATGCCCTGCTCACCTACATGATCGCACA 15743185 Score = 93.3 bits (102), Expect = 4e-14 Identities = 114/153 (75%), Gaps = 2/153 (1%) Strand=Plus/Plus Query 6899 TACTCCGCCCCAAAGTGTCTCCACTGGAACCCGTAGACCGGGCCCAAGTCGCCCTCCTCC 6958 || || |||||||| || |||||||| || || || || ||||| || || || || || Sbjct 15745770 TATTCTGCCCCAAAATGCCTCCACTGAAAGCCATAAACTGGGCCTAAATCCCCTTCTTCT 15745829 Query 6959 CGAGATGG-GAACCCCCGCTTGTCCAGAAAGTCTCGAGACCCGTGAGCGTCCCAGATCTT 7017 | | ||| ||| ||| | |||||| |||||||||||||| | || |||||||| || Sbjct 15745830 CT-GTTGGAGAATCCCAGGCTGTCCAAGAAGTCTCGAGACCCATTGGCATCCCAGATTTT 15745888 Query 7018 CACCCCCCGGGACGAGAGCTCCTTGGTGTTCGT 7050 ||| ||| ||| || || ||||| | ||| || Sbjct 15745889 CACTCCCTTGGAAGACAGTTCCTTAGCGTTTGT 15745921 Score = 93.3 bits (102), Expect = 4e-14 Identities = 114/153 (75%), Gaps = 2/153 (1%) Strand=Plus/Minus Query 34295 ACGAACACCAAGGAGCTCTCGTCCCGGGGGGTGAAGATCTGGGACGCTCACGGGTCTCGA 34354 || ||| | ||||| || || ||| ||| ||||| |||||||| || | ||||||||| Sbjct 15745921 ACAAACGCTAAGGAACTGTCTTCCAAGGGAGTGAAAATCTGGGATGCCAATGGGTCTCGA 15745862 Query 34355 GACTTTCTGGACAAGCGGGGGTTC-CCATCTCGGGAGGAGGGCGACTTGGGCCCGGTCTA 34413 ||||| |||||| | ||| ||| ||| | | || || || || || ||||| || || Sbjct 15745861 GACTTCTTGGACAGCCTGGGATTCTCCAAC-AGAGAAGAAGGGGATTTAGGCCCAGTTTA 15745803 Query 34414 CGGGTTCCAGTGGAGACACTTTGGGGCGGAGTA 34446 || || |||||||| || |||||||| || || Sbjct 15745802 TGGCTTTCAGTGGAGGCATTTTGGGGCAGAATA 15745770 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448218789671760