Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Mustela_20putorius_20furo_20[refseq_20GCF_5F000215625.1_202011-06-
02] 7,783 sequences; 2,410,879,678 total letters
Query= NC_029132.1
Length=140122
Score E
Sequences producing significant alignments: (Bits) Value
seq63 269 2e-67
seq9 159 3e-34
>seq63
Length=10485012
Score = 269 bits (298), Expect = 2e-67
Identities = 419/595 (70%), Gaps = 3/595 (1%)
Strand=Plus/Plus
Query 6425 TGCGGCCGGTACCCTTCCAACACGAAGTCCTCGCTCCTAAAGTCATCGATTGAGGTGACG 6484
|| || | |||||| || | | ||||| || | | |||||||| |||| ||
Sbjct 8862327 TGAGGACTGTACCCCTCAATCTGAAAGTCTTCAGCCTTGAAGTCATCCATTGTCTCAACT 8862386
Query 6485 GCTCGAATAATTTTGAGCTGGGGGAACGGTCGGGGCTCTCGTTGCAGCTGGATCCGGAGC 6544
||||| |||||||||| ||||| || | || ||| | || ||||| || |||
Sbjct 8862387 TTTCGAAGGATTTTGAGCTTCGGGAAAGGCCTTGGTTCTTGCTGAAGCTGCATTTTCAGC 8862446
Query 6545 CGCTCGATGTGGTTCAGGTAGATATGCGCATCCCCCAACGTATGCACCAGCTCCCCAGGA 6604
|||| ||||| |||||||| ||||| ||||| ||||| ||||| || | || || ||
Sbjct 8862447 AGCTCAATGTGATTCAGGTAAATATGTGCATCTCCCAAAGTATGTACGAAGTCACCTGGC 8862506
Query 6605 ACCAACCCCACGACATGAGCGATCATGTACGTGAGCAGAGCGTAACTAGCAATGTTGAAC 6664
| || || || || |||||||| |||||||| || || || || ||||||||
Sbjct 8862507 TTTAGTCCTGTGATGTGTGCAATCATGTAGGTGAGCAGGGCATAGCTGGCGATGTTGAAG 8862566
Query 6665 GGCACCCCTAACCCCATGTCTCCCGATCGTTGATAGAGCTGGCAGGACAGCTCCCCATTC 6724
||||| || | |||||||| || || | || || |||||||||||||| || ||||||
Sbjct 8862567 GGCACGCCCAGGCCCATGTCCCCTGACCTCTGGTACAGCTGGCAGGACAGTTCACCATTC 8862626
Query 6725 GCGACGTAGAATTGGCAGAGGGTGTGGCACGGGGGGAGCGCCATCAGAGGGAGATCCTTC 6784
| ||| | || |||||||||| |||||||| ||||| ||| ||||||| | ||| ||
Sbjct 8862627 ACCACGCAAAACTGGCAGAGGGCATGGCACGGAGGGAGGGCCGTCAGAGGAATATCTTTT 8862686
Query 6785 GGGTTCCACGCGCACATCACGATCCTTCTGTCATCAGGGTTCCGCTTCAAGGTGTCGATC 6844
|| ||||| | | || | ||| |||||||| | ||||| | || | ||||| ||
Sbjct 8862687 GGATTCCAGCCACTCAGGATGATTCTTCTGTCGTTGGGGTT-GGTTTGATTGTGTCAATG 8862745
Query 6845 ACGTACTGCAGCTGGTCCGCTCCCTGTCCCGAATAGTCCGCTTCGCTCCCCCGATACTCC 6904
|| | ||||| ||||| |||| || || ||||| || | || | | || ||
Sbjct 8862746 ACCTTTTGCAGTTGGTCTACTCCTTGACCTGAATAATCTGAATCCTTATCTATGTATTCT 8862805
Query 6905 GCCCCAAAGTGTCTCCACTGGAACCCGTAGACCGGGCCCAAGTCGCCCTCCTCCCGAGAT 6964
|||||||| || ||||||| || | || || ||||| || || |||| || | |
Sbjct 8862806 GCCCCAAAATGCTTCCACTGAAAGACATAAACTGGGCCTAAATC-CCCTTCTTTTCTGTT 8862864
Query 6965 GG-GAACCCCCGCTTGTCCAGAAAGTCTCGAGACCCGTGAGCGTCCCAGATCTTC 7018
|| ||||||| ||||| |||||||||||||| | || |||||||| |||
Sbjct 8862865 GGAGAACCCCAAGCTGTCCTAGAAGTCTCGAGACCCATTGGCATCCCAGATTTTC 8862919
Score = 269 bits (298), Expect = 2e-67
Identities = 419/595 (70%), Gaps = 3/595 (1%)
Strand=Plus/Minus
Query 34327 GAAGATCTGGGACGCTCACGGGTCTCGAGACTTTCTGGACAAGCGGGGGTTC-CCATCTC 34385
||| |||||||| || | |||||||||||||| ||||| ||||||| ||| |
Sbjct 8862919 GAAAATCTGGGATGCCAATGGGTCTCGAGACTTCTAGGACAGCTTGGGGTTCTCCAACAG 8862860
Query 34386 GGGAGGAGGGCGACTTGGGCCCGGTCTACGGGTTCCAGTGGAGACACTTTGGGGCGGAGT 34445
|| |||| || || ||||| || || | || ||||||| || |||||||| || |
Sbjct 8862859 AAAAGAAGGG-GATTTAGGCCCAGTTTATGTCTTTCAGTGGAAGCATTTTGGGGCAGAAT 8862801
Query 34446 ATCGGGGGAGCGAAGCGGACTATTCGGGACAGGGAGCGGACCAGCTGCAGTACGTGATCG 34505
| | | || | || ||||| || || |||| ||||| ||||| | || || |
Sbjct 8862800 ACATAGATAAGGATTCAGATTATTCAGGTCAAGGAGTAGACCAACTGCAAAAGGTCATTG 8862741
Query 34506 ACACCTTGAAGCGGAACCCTGATGACAGAAGGATCGTGATGTGCGCGTGGAACCCGAAGG 34565
|||| | || | ||||| | |||||||| ||| | || | | ||||| || || |
Sbjct 8862740 ACACAATCAAACC-AACCCCAACGACAGAAGAATCATCCTGAGTGGCTGGAATCCAAAAG 8862682
Query 34566 ATCTCCCTCTGATGGCGCTCCCCCCGTGCCACACCCTCTGCCAATTCTACGTCGCGAATG 34625
|| | ||||||| ||| ||||| |||||||| |||||||||| || | ||| | |||||
Sbjct 8862681 ATATTCCTCTGACGGCCCTCCCTCCGTGCCATGCCCTCTGCCAGTTTTGCGTGGTGAATG 8862622
Query 34626 GGGAGCTGTCCTGCCAGCTCTATCAACGATCGGGAGACATGGGGTTAGGGGTGCCGTTCA 34685
| || |||||||||||||| || || | || || |||||||| | || ||||| ||||
Sbjct 8862621 GTGAACTGTCCTGCCAGCTGTACCAGAGGTCAGGGGACATGGGCCTGGGCGTGCCCTTCA 8862562
Query 34686 ACATTGCTAGTTACGCTCTGCTCACGTACATGATCGCTCATGTCGTGGGGTTGGTTCCTG 34745
|||| || || || || |||||||| |||||||| || || || || | || |
Sbjct 8862561 ACATCGCCAGCTATGCCCTGCTCACCTACATGATTGCACACATCACAGGACTAAAGCCAG 8862502
Query 34746 GGGAGCTGGTGCATACGTTGGGGGATGCGCATATCTACCTGAACCACATCGAGCGGCTCC 34805
| || | || ||||| ||||| ||||| ||||| |||||||| ||||| |||| |||
Sbjct 8862501 GTGACTTCGTACATACTTTGGGAGATGCACATATTTACCTGAATCACATTGAGCTGCTGA 8862442
Query 34806 GGATCCAGCTGCAACGAGAGCCCCGACCGTTCCCCCAGCTCAAAATTATTCGAGCCGTCA 34865
|| ||||| || | ||| || | || ||||| |||||||||| ||||| ||
Sbjct 8862441 AAATGCAGCTTCAGCAAGAACCAAGGCCTTTCCCGAAGCTCAAAATCCTTCGAAAAGTTG 8862382
Query 34866 CCTCAATCGATGACTTTAGGAGCGAGGACTTCGTGTTGGAAGGGTACCGGCCGCA 34920
|||| |||||||| | | || ||||| | | || |||||| | || ||
Sbjct 8862381 AGACAATGGATGACTTCAAGGCTGAAGACTTTCAGATTGAGGGGTACAGTCCTCA 8862327
>seq9
Length=27295742
Score = 159 bits (176), Expect = 3e-34
Identities = 132/161 (82%), Gaps = 0/161 (0%)
Strand=Plus/Plus
Query 6620 TGAGCGATCATGTACGTGAGCAGAGCGTAACTAGCAATGTTGAACGGCACCCCTAACCCC 6679
|| ||||||||||| |||||||| || || || || |||||||| ||||| || | |||
Sbjct 15743185 TGTGCGATCATGTAGGTGAGCAGGGCATAGCTGGCGATGTTGAAGGGCACGCCCAGGCCC 15743244
Query 6680 ATGTCTCCCGATCGTTGATAGAGCTGGCAGGACAGCTCCCCATTCGCGACGTAGAATTGG 6739
|| || || || | || || ||||||||||||||||| |||||| | |||||||| |||
Sbjct 15743245 ATATCCCCTGACCTCTGGTACAGCTGGCAGGACAGCTCACCATTCACCACGTAGAACTGG 15743304
Query 6740 CAGAGGGTGTGGCACGGGGGGAGCGCCATCAGAGGGAGATC 6780
||||||| |||||||| ||||| ||||||||||| |||||
Sbjct 15743305 CAGAGGGCATGGCACGGAGGGAGGGCCATCAGAGGAAGATC 15743345
Score = 159 bits (176), Expect = 3e-34
Identities = 132/161 (82%), Gaps = 0/161 (0%)
Strand=Plus/Minus
Query 34565 GATCTCCCTCTGATGGCGCTCCCCCCGTGCCACACCCTCTGCCAATTCTACGTCGCGAAT 34624
||||| ||||||||||| ||||| |||||||| |||||||||| |||||||| | ||||
Sbjct 15743345 GATCTTCCTCTGATGGCCCTCCCTCCGTGCCATGCCCTCTGCCAGTTCTACGTGGTGAAT 15743286
Query 34625 GGGGAGCTGTCCTGCCAGCTCTATCAACGATCGGGAGACATGGGGTTAGGGGTGCCGTTC 34684
|| ||||||||||||||||| || || | || || || ||||| | || ||||| |||
Sbjct 15743285 GGTGAGCTGTCCTGCCAGCTGTACCAGAGGTCAGGGGATATGGGCCTGGGCGTGCCCTTC 15743226
Query 34685 AACATTGCTAGTTACGCTCTGCTCACGTACATGATCGCTCA 34725
||||| || || || || |||||||| ||||||||||| ||
Sbjct 15743225 AACATCGCCAGCTATGCCCTGCTCACCTACATGATCGCACA 15743185
Score = 93.3 bits (102), Expect = 4e-14
Identities = 114/153 (75%), Gaps = 2/153 (1%)
Strand=Plus/Plus
Query 6899 TACTCCGCCCCAAAGTGTCTCCACTGGAACCCGTAGACCGGGCCCAAGTCGCCCTCCTCC 6958
|| || |||||||| || |||||||| || || || || ||||| || || || || ||
Sbjct 15745770 TATTCTGCCCCAAAATGCCTCCACTGAAAGCCATAAACTGGGCCTAAATCCCCTTCTTCT 15745829
Query 6959 CGAGATGG-GAACCCCCGCTTGTCCAGAAAGTCTCGAGACCCGTGAGCGTCCCAGATCTT 7017
| | ||| ||| ||| | |||||| |||||||||||||| | || |||||||| ||
Sbjct 15745830 CT-GTTGGAGAATCCCAGGCTGTCCAAGAAGTCTCGAGACCCATTGGCATCCCAGATTTT 15745888
Query 7018 CACCCCCCGGGACGAGAGCTCCTTGGTGTTCGT 7050
||| ||| ||| || || ||||| | ||| ||
Sbjct 15745889 CACTCCCTTGGAAGACAGTTCCTTAGCGTTTGT 15745921
Score = 93.3 bits (102), Expect = 4e-14
Identities = 114/153 (75%), Gaps = 2/153 (1%)
Strand=Plus/Minus
Query 34295 ACGAACACCAAGGAGCTCTCGTCCCGGGGGGTGAAGATCTGGGACGCTCACGGGTCTCGA 34354
|| ||| | ||||| || || ||| ||| ||||| |||||||| || | |||||||||
Sbjct 15745921 ACAAACGCTAAGGAACTGTCTTCCAAGGGAGTGAAAATCTGGGATGCCAATGGGTCTCGA 15745862
Query 34355 GACTTTCTGGACAAGCGGGGGTTC-CCATCTCGGGAGGAGGGCGACTTGGGCCCGGTCTA 34413
||||| |||||| | ||| ||| ||| | | || || || || || ||||| || ||
Sbjct 15745861 GACTTCTTGGACAGCCTGGGATTCTCCAAC-AGAGAAGAAGGGGATTTAGGCCCAGTTTA 15745803
Query 34414 CGGGTTCCAGTGGAGACACTTTGGGGCGGAGTA 34446
|| || |||||||| || |||||||| || ||
Sbjct 15745802 TGGCTTTCAGTGGAGGCATTTTGGGGCAGAATA 15745770
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 448218789671760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |