Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Mustela_20putorius_20furo_20[refseq_20GCF_5F000215625.1_202011-06-
02] 7,783 sequences; 2,410,879,678 total letters
Query= NC_029255.1
Length=129563
Score E
Sequences producing significant alignments: (Bits) Value
seq81 190 2e-43
seq63 129 5e-25
seq121 123 2e-23
seq16 118 9e-22
seq29 100 2e-16
>seq81
Length=8639600
Score = 190 bits (210), Expect = 2e-43
Identities = 189/245 (77%), Gaps = 0/245 (0%)
Strand=Plus/Minus
Query 1281 GAAGTTGTCATTGTAACATGGCAAAAAGTTAAAGCATCAAGCCCAGAAAACATGGCCACT 1340
||||| | ||||| |||||||| ||| | || | |||||||||||||||| |||
Sbjct 6612195 GAAGTCTTGATTGTGACATGGCAGAAAATCAAGCCTGTTAGCCCAGAAAACATGGTCACC 6612136
Query 1341 TTTAGTAATGACCACGGGGTTGTTGTTCAGCCAGCATACAAAGATAAAATGAACATAACT 1400
|| || || |||| |||||||| || ||||| || || || || || || ||||| |||
Sbjct 6612135 TTCAGCAAGAACCATGGGGTTGTGGTCCAGCCCGCCTATAAGGACAAGATAAACATCACT 6612076
Query 1401 GAGCTTGGACTACAAAACACAACTATAACCTTCTGGAACACAACATTGGATGATGAAGGG 1460
||||| | ||| | ||| |||| || || |||||||| || || |||| |||||||||
Sbjct 6612075 GAGCTGGAACTCAAGAACTCAACCATCACGTTCTGGAATACCACCCTGGAGGATGAAGGG 6612016
Query 1461 TGCTACAAGTGTTTATTTAACACTTTTGGATCTGGGAAGATGTCAGGAATAGGGTGTCTA 1520
|| |||||||| | || || |||||||| ||||||||||| |||||||||| || ||
Sbjct 6612015 TGTTACAAGTGCCTCTTCAATACTTTTGGTTCTGGGAAGATCTCAGGAATAGCCTGCCTC 6611956
Query 1521 ACCCT 1525
|||||
Sbjct 6611955 ACCCT 6611951
>seq63
Length=10485012
Score = 129 bits (142), Expect = 5e-25
Identities = 154/209 (74%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 118456 AGTTGGAGTTTCAGTGGCTCAATGTGATTCATATAGACATGAGCATCCCCAATTGTATGT 118515
|| || | |||||| ||||||||||||||| || | ||| ||||| || | ||||||
Sbjct 8862432 AGCTGCATTTTCAGCAGCTCAATGTGATTCAGGTAAATATGTGCATCTCCCAAAGTATGT 8862491
Query 118516 ATGAATTCACCAGGTGTAAGCCCTGTCAGGTGAGCAATCATGTATGTCAACAAACTGTAG 118575
| ||| ||||| || | || ||||| | ||| ||||||||||| || | || |||
Sbjct 8862492 ACGAAGTCACCTGGCTTTAGTCCTGTGATGTGTGCAATCATGTAGGTGAGCAGGGCATAG 8862551
Query 118576 CTGGCTACATTAAAAGGAACACCCAGACCCATGTCTGCTGATCTCTGGTACAATTGGCAA 118635
||||| | || || || || ||||| |||||||| |||| |||||||||| |||||
Sbjct 8862552 CTGGCGATGTTGAAGGGCACGCCCAGGCCCATGTCCCCTGACCTCTGGTACAGCTGGCAG 8862611
Query 118636 GAGAGCTCCCCGTTTGCAACATAAAACTG 118664
|| || || || || | || |||||||
Sbjct 8862612 GACAGTTCACCATTCACCACGCAAAACTG 8862640
>seq121
Length=6552913
Score = 123 bits (136), Expect = 2e-23
Identities = 286/426 (67%), Gaps = 9/426 (2%)
Strand=Plus/Plus
Query 2263 AAACAGAATGTTGTAATTATGGGAAGAAAGACATGGTTT-TCACTTCCCATTAAAAGCA- 2320
||| ||||| | || |||||||| | |||||| | || |||||| |||||| |
Sbjct 5101579 AAATAGAATTTCGTGATTATGGGTCGGAAGACAGACTCACTCTCTTCCC--TAAAAGAAC 5101636
Query 2321 -GGCCTTTGAACAACAGAATAAATCTGGTTCTCAGTAGACACCTTAAAGAGCCACCACGT 2379
| | ||| || |||||| | | | |||||||| ||| | || || || || | ||
Sbjct 5101637 TGACTTTTAAAGAACAGAGTTCAATTAGTTCTCAGAAGAGAACTCAAGGAACCTCTACAA 5101696
Query 2380 GGGGCTCACTTTGTTGCAAAAAGTATAGATCACGCTCTGGAAATTATAATAGGACCAGAA 2439
|| ||||| ||| | || |||||| | | | | || | || |||| | |||||||
Sbjct 5101697 GGTGCTCATTTTCTAGCCAAAAGTCTGGGTGATGCCTTAAAACTTATTTAACAACCAGAA 5101756
Query 2440 TTAAAAGACAGGGTGGATAAGATTTGGATAATTGGTGGAAGATCTGTCTATGAGGAGAGC 2499
|||| | | | ||||| | | |||||||| | || || || |||| ||| |||| ||
Sbjct 5101757 TTAACAAAGAAAGTGGACATGGTTTGGATAGTGGGAGGCAGTTCTGCTTATAAGGAAGGC 5101816
Query 2500 ATTACAAGATCTTGCAAACAGATGCTGTTTTTAACAAGGATTCTGCAAAAATTTGAATGT 2559
|| | | ||| | | | | || ||| | |||||||| |||| |||||||| |
Sbjct 5101817 ATGAACAAATCAGACCATCTCAAACTATTTGTGACAAGGATCATGCAGGAATTTGAAAAT 5101876
Query 2560 GATACA---TACTTCCCAGAAATTAATCTTACCAAATACAAACAACTTACTGAATTTCCA 2616
| ||| | || ||||||| | || | ||||| || | ||| | |||| |||
Sbjct 5101877 AACACATTTTTTTTTCCAGAAACTGATTTGGGGAAATATAAGCTTCTTCCAGAATACCCA 5101936
Query 2617 GGTGTTCCCTCTGCCGTGCAAGAAG-AAAATGGAATTAGATACAAATTTGAGATATATGa 2675
|||||| |||| || ||||| | |||| || |||| | |||||||| ||||| |
Sbjct 5101937 AGTGTTCTTTCTGGTGTCCAAGAGGAAAAAAGGTATTAAGTGGAAATTTGAAGTATATAA 5101996
Query 2676 aaaaaa 2681
||| ||
Sbjct 5101997 AAAGAA 5102002
>seq16
Length=20317840
Score = 118 bits (130), Expect = 9e-22
Identities = 110/140 (79%), Gaps = 0/140 (0%)
Strand=Plus/Minus
Query 3245 GTTGTTGATGAGCTCTTCCGAGATGGGGTAAACTGGGGGCGCATTGTTGCTTTCTTTGAG 3304
|| || || ||||||||| | |||||||| ||||||||| | ||||| || |||||||||
Sbjct 7343724 GTGGTGGAGGAGCTCTTCAGGGATGGGGTGAACTGGGGGAGGATTGTGGCCTTCTTTGAG 7343665
Query 3305 TTTGGTGGTGTTATGTGTGTGGAAAGCGTCAATAGAGGCATACCCTCCCTCGTTGACAAC 3364
|| ||||| || ||||||||||| |||||||| | | || | |||| || ||||||
Sbjct 7343664 TTCGGTGGGGTCATGTGTGTGGAGAGCGTCAACCGGGAGATGTCGCCCCTGGTGGACAAC 7343605
Query 3365 ATTGCCGCGTGGATGACAGA 3384
|| ||| |||||||| ||
Sbjct 7343604 ATCGCCCTATGGATGACTGA 7343585
>seq29
Length=15480060
Score = 100 bits (110), Expect = 2e-16
Identities = 208/302 (69%), Gaps = 17/302 (6%)
Strand=Plus/Minus
Query 2384 CTCACTTTGTTGCAAAAAGTATAGATCACGCTCTGGAAATTATAATAGGA-CCAGAATTA 2442
|||| ||| |||| ||| | | ||| | | ||| ||||| | || | |||||||||
Sbjct 11134371 CTCATTTTCTTGCTGAAAATCTGGATGATG-TCTTAAAATTTTTTGAGCAACCAGAATTA 11134313
Query 2443 AAAGACAGGGTGGATAAGATTTGGATAATTGGT-GGAAGATCTGTCTATGAGGAGAGCAT 2501
| | | ||||| | |||| ||||| |||| || || ||||| ||| |||| |||
Sbjct 11134312 GCAAATAAAGTGGACATGATTAGGATAGTTGGGAGGCAGTTCTGTTTATAAGGA-AGCCG 11134254
Query 2502 T--ACAAGATCTTGCAAACAGATGCTGTTTTTAACAAGGATTCTGCAAAAATTTGAATGT 2559
| ||||| | || | | | || ||| | ||||||||| |||| || |||||| ||
Sbjct 11134253 TGAACAAGC-CAGGCCATCTTAGACTATTTGTGACAAGGATTATGCAGAA-TTTGAAAGT 11134196
Query 2560 GATACATACTTCCCAGAAATTAATCTTACCAAATACAAACAACTTACTGAATTTCCAGGT 2619
||||| | || ||||||||| || | ||||| |||| || ||||||
Sbjct 11134195 GATACTTTTTTTCCAGAAATTGATTTGGAGAAATAAAAACTTCTC---------CCAGGT 11134145
Query 2620 GTTCCCTCTGCCGTGCAAGAAGAAAATGGAATTAGATACAAATTTGAGATATATGaaaaa 2679
|||| ||| ||| || | ||| | ||||||| |||||||||||| ||||||| ||
Sbjct 11134144 GTTCTTTCTAACGTCCAGAAGGAAGAAGGAATTAAATACAAATTTGAAGTATATGAGAAG 11134085
Query 2680 aa 2681
||
Sbjct 11134084 AA 11134083
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 414437484673612
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |