Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Mustela_20putorius_20furo_20[refseq_20GCF_5F000215625.1_202011-06-
02] 7,783 sequences; 2,410,879,678 total letters
Query= NC_029996.1
Length=134272
Score E
Sequences producing significant alignments: (Bits) Value
seq323 95.1 1e-14
seq101 93.3 4e-14
seq125 89.7 4e-13
>seq323
Length=1159590
Score = 95.1 bits (104), Expect = 1e-14
Identities = 163/237 (69%), Gaps = 0/237 (0%)
Strand=Plus/Plus
Query 39054 CAAGCCTCCTCTTAAGCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATC 39113
|| ||| || || | ||| | |||| || || ||| |||||| || || || |||||
Sbjct 303389 CATGCCACCCCTCAGGCGCAGGACCAGGTGCAGAGTGGACTCTTTCTGGATGTTGTAATC 303448
Query 39114 GGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGT 39173
| ||| || || | || || ||||| ||||| ||||| ||||| | |||||||||||
Sbjct 303449 AGAAAGAGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATAAGCCTCTGCTGGTCGGG 303508
Query 39174 GGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTC 39233
||| | || ||| || || ||| || || | || | | || || || | |||
Sbjct 303509 GGGGATGCCCTCCTTATCTTGGATCTTGGCCTTCACATTCTCGATGGTGTCACTGGGCTC 303568
Query 39234 CACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCATCTTTAC 39290
||| |||| ||||| | || || ||||| || || || || || ||||| || ||
Sbjct 303569 CACCTCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAAATCTGCATTTTGAC 303625
>seq101
Length=7325712
Score = 93.3 bits (102), Expect = 4e-14
Identities = 164/237 (69%), Gaps = 3/237 (1%)
Strand=Plus/Plus
Query 39054 CAAGCCTCCTCTTAAGCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATC 39113
|| ||| || || | ||| | |||| || || ||| |||||| || || || |||||
Sbjct 127793 CATGCCACCCCTCAGGCGCAGGACCAGGTGCAGAGTGGACTCTTTCTGGATGTTGTAATC 127852
Query 39114 GGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGT 39173
| ||| || || | || || ||||| ||||| ||||| ||||| | |||||||||||
Sbjct 127853 AGAAAGAGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATAAGCCTCTGCTGGTCGGG 127912
Query 39174 GGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTC 39233
||| | || ||||||||| ||| || || | | | | | || || || |||
Sbjct 127913 GGGGATGCCCTCTTTGTCTTGGATCTTGGCCTTCA-CAT--TCTCGGTGTCACTGAGCTC 127969
Query 39234 CACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCATCTTTAC 39290
||| |||| ||||| | || || ||||| || || || || || ||||| || ||
Sbjct 127970 CACCTCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAAATCTGCATTTTGAC 128026
>seq125
Length=6462000
Score = 89.7 bits (98), Expect = 4e-13
Identities = 136/194 (70%), Gaps = 0/194 (0%)
Strand=Plus/Plus
Query 39093 CTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAA 39152
|||||| || ||||| | ||| | || | || | || || |||||||||||| ||||
Sbjct 2357464 CTCTTTCTGGATATTGTGATCTGACAGAGCGCGGCCATCTTCCAGCTGTTTGCCCACAAA 2357523
Query 39153 TATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGT 39212
|| |||| |||||| || | ||| | || ||| ||||| |||||| ||||| |
Sbjct 2357524 AATCAGACACTGCTGATCAGGGGGGATGCCCTCCTTGTCTTCGATTTTGGCTTTGACATT 2357583
Query 39213 CGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAAC 39272
| | | || ||||| | ||| || || | ||||| | || || ||||| || || |
Sbjct 2357584 CTCAATGGTGTCGCTGGGCTCAACCTCAAGGGTGATGGTCTTGCCTGTCAGGGTCTTCAT 2357643
Query 39273 AAAGATTTGCATCT 39286
||||| |||||||
Sbjct 2357644 GAAGATCTGCATCT 2357657
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 429504855317879
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |