Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mustela_20putorius_20furo_20[refseq_20GCF_5F000215625.1_202011-06- 02] 7,783 sequences; 2,410,879,678 total letters Query= NC_029996.1 Length=134272 Score E Sequences producing significant alignments: (Bits) Value seq323 95.1 1e-14 seq101 93.3 4e-14 seq125 89.7 4e-13 >seq323 Length=1159590 Score = 95.1 bits (104), Expect = 1e-14 Identities = 163/237 (69%), Gaps = 0/237 (0%) Strand=Plus/Plus Query 39054 CAAGCCTCCTCTTAAGCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATC 39113 || ||| || || | ||| | |||| || || ||| |||||| || || || ||||| Sbjct 303389 CATGCCACCCCTCAGGCGCAGGACCAGGTGCAGAGTGGACTCTTTCTGGATGTTGTAATC 303448 Query 39114 GGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGT 39173 | ||| || || | || || ||||| ||||| ||||| ||||| | ||||||||||| Sbjct 303449 AGAAAGAGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATAAGCCTCTGCTGGTCGGG 303508 Query 39174 GGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTC 39233 ||| | || ||| || || ||| || || | || | | || || || | ||| Sbjct 303509 GGGGATGCCCTCCTTATCTTGGATCTTGGCCTTCACATTCTCGATGGTGTCACTGGGCTC 303568 Query 39234 CACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCATCTTTAC 39290 ||| |||| ||||| | || || ||||| || || || || || ||||| || || Sbjct 303569 CACCTCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAAATCTGCATTTTGAC 303625 >seq101 Length=7325712 Score = 93.3 bits (102), Expect = 4e-14 Identities = 164/237 (69%), Gaps = 3/237 (1%) Strand=Plus/Plus Query 39054 CAAGCCTCCTCTTAAGCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATC 39113 || ||| || || | ||| | |||| || || ||| |||||| || || || ||||| Sbjct 127793 CATGCCACCCCTCAGGCGCAGGACCAGGTGCAGAGTGGACTCTTTCTGGATGTTGTAATC 127852 Query 39114 GGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGT 39173 | ||| || || | || || ||||| ||||| ||||| ||||| | ||||||||||| Sbjct 127853 AGAAAGAGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATAAGCCTCTGCTGGTCGGG 127912 Query 39174 GGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTC 39233 ||| | || ||||||||| ||| || || | | | | | || || || ||| Sbjct 127913 GGGGATGCCCTCTTTGTCTTGGATCTTGGCCTTCA-CAT--TCTCGGTGTCACTGAGCTC 127969 Query 39234 CACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCATCTTTAC 39290 ||| |||| ||||| | || || ||||| || || || || || ||||| || || Sbjct 127970 CACCTCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAAATCTGCATTTTGAC 128026 >seq125 Length=6462000 Score = 89.7 bits (98), Expect = 4e-13 Identities = 136/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 39093 CTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAA 39152 |||||| || ||||| | ||| | || | || | || || |||||||||||| |||| Sbjct 2357464 CTCTTTCTGGATATTGTGATCTGACAGAGCGCGGCCATCTTCCAGCTGTTTGCCCACAAA 2357523 Query 39153 TATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGT 39212 || |||| |||||| || | ||| | || ||| ||||| |||||| ||||| | Sbjct 2357524 AATCAGACACTGCTGATCAGGGGGGATGCCCTCCTTGTCTTCGATTTTGGCTTTGACATT 2357583 Query 39213 CGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAAC 39272 | | | || ||||| | ||| || || | ||||| | || || ||||| || || | Sbjct 2357584 CTCAATGGTGTCGCTGGGCTCAACCTCAAGGGTGATGGTCTTGCCTGTCAGGGTCTTCAT 2357643 Query 39273 AAAGATTTGCATCT 39286 ||||| ||||||| Sbjct 2357644 GAAGATCTGCATCT 2357657 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429504855317879