Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Mustela_20putorius_20furo_20[refseq_20GCF_5F000215625.1_202011-06-
02] 7,783 sequences; 2,410,879,678 total letters
Query= NC_030394.2
Length=126965
Score E
Sequences producing significant alignments: (Bits) Value
seq63 228 7e-55
seq9 165 7e-36
seq70 91.5 1e-13
>seq63
Length=10485012
Score = 228 bits (252), Expect = 7e-55
Identities = 355/513 (69%), Gaps = 2/513 (0%)
Strand=Plus/Plus
Query 29611 GGGAAAGGGTCTGGGCTCCCTCTCGAGCTGAATCCTCAGCGGTTCCACGTGGTCAAGGTA 29670
|||||||| || || || || ||||| || ||||| | || | ||| | |||||
Sbjct 8862408 GGGAAAGGC-CTTGGTTCTTGCTGAAGCTGCATTTTCAGCAGCTCAATGTGATTCAGGTA 8862466
Query 29671 GACGTGAGCATCTCCCAGGGTGTGGACAAACTCTCCCGGTTCTAGCCCGGTGACGTGAGC 29730
| || |||||||||| || || || || || || || | ||| || |||| ||| ||
Sbjct 8862467 AATATGTGCATCTCCCAAAGTATGTACGAAGTCACCTGGCTTTAGTCCTGTGATGTGTGC 8862526
Query 29731 CATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGCACCCCGAGCCCCATGTC 29790
|||||||| ||||| || | |||||||||||||| |||||||| || || ||||||||
Sbjct 8862527 AATCATGTAGGTGAGCAGGGCATAGCTGGCGATGTTGAAGGGCACGCCCAGGCCCATGTC 8862586
Query 29791 CCCTGACCTCTGGTAGAGCTGGCACGAGAGCTCTCCGTCGCTCACGTAAAACTGACACAT 29850
||||||||||||||| |||||||| || || || || | |||| ||||||| || |
Sbjct 8862587 CCCTGACCTCTGGTACAGCTGGCAGGACAGTTCACCATTCACCACGCAAAACTGGCAGAG 8862646
Query 29851 GGCATGGCACGGAGGAAGGGCCATGAGACCCAAGTCTTTGGGGTTCCAGGCACACACGAT 29910
||||||||||||||| |||||| | ||| | ||||| || |||||| ||| || |||
Sbjct 8862647 GGCATGGCACGGAGGGAGGGCCGTCAGAGGAATATCTTTTGGATTCCAGCCACTCAGGAT 8862706
Query 29911 GATGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTCCACGGCGTTTTGCAGCTGATCCAC 29970
||| | ||||| | |||||| | |||| ||| | | | |||||||| || || ||
Sbjct 8862707 GATTCTTCTGTCGTTGGGGTTGGT-TTGATTGTGTCAATGACCTTTTGCAGTTGGTCTAC 8862765
Query 29971 CCCCATCCCCGAGTAGTCTGNNNNNNNNNNNNNNNNNNNNNNNNCGAAATGCCTCCACTG 30030
|| || || || |||| | |||||| |||||||
Sbjct 8862766 TCCTTGACCTGAATAATCTGAATCCTTATCTATGTATTCTGCCCCAAAATGCTTCCACTG 8862825
Query 30031 GAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAGCCCCTCTTGTCCAA 30090
|| | || || || || | || || |||| |||| ||| ||| ||||| |
Sbjct 8862826 AAAGACATAAACTGGGCCTAAATCCCCTTCTTTTCTGTTGGAGAACCCCAAGCTGTCCTA 8862885
Query 30091 AAAGTCTCTGGAACCGTTGGCGTCCCAGATCTT 30123
||||||| || || ||||| |||||||| ||
Sbjct 8862886 GAAGTCTCGAGACCCATTGGCATCCCAGATTTT 8862918
>seq9
Length=27295742
Score = 165 bits (182), Expect = 7e-36
Identities = 136/166 (82%), Gaps = 0/166 (0%)
Strand=Plus/Plus
Query 29713 TAGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGG 29772
||| || |||| ||| || |||||||| ||||| || | |||||||||||||| |||||
Sbjct 15743172 TAGGCCTGTGATGTGTGCGATCATGTAGGTGAGCAGGGCATAGCTGGCGATGTTGAAGGG 15743231
Query 29773 CACCCCGAGCCCCATGTCCCCTGACCTCTGGTAGAGCTGGCACGAGAGCTCTCCGTCGCT 29832
||| || || ||||| ||||||||||||||||| |||||||| || ||||| || |
Sbjct 15743232 CACGCCCAGGCCCATATCCCCTGACCTCTGGTACAGCTGGCAGGACAGCTCACCATTCAC 15743291
Query 29833 CACGTAAAACTGACACATGGCATGGCACGGAGGAAGGGCCATGAGA 29878
|||||| ||||| || | ||||||||||||||| |||||||| |||
Sbjct 15743292 CACGTAGAACTGGCAGAGGGCATGGCACGGAGGGAGGGCCATCAGA 15743337
>seq70
Length=9335154
Score = 91.5 bits (100), Expect = 1e-13
Identities = 85/108 (79%), Gaps = 0/108 (0%)
Strand=Plus/Minus
Query 114284 TTAAGCTCCCTGCTGAGGACTACGTTTAGCCTGTCTCTCAGAGGTCTATTCTTTTCGGGG 114343
|| || || |||||||| |||| || | || || | | ||||| |||||| || ||
Sbjct 9239470 TTGAGGTCTCTGCTGAGAACTAAATTAATTCTATCCTTTAAAGGTCGATTCTTCTCAGGA 9239411
Query 114344 ATGGAGAACCAAGTCTTTCTACCCATTATCACCACGTTCTGCTTACCT 114391
|| |||||||| |||||||||||||| ||||||| |||||| ||||||
Sbjct 9239410 ATAGAGAACCATGTCTTTCTACCCATAATCACCAAGTTCTGTTTACCT 9239363
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 406124673262738
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |