Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mustela_20putorius_20furo_20[refseq_20GCF_5F000215625.1_202011-06- 02] 7,783 sequences; 2,410,879,678 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq141 120 3e-22 seq17 86.0 5e-12 >seq141 Length=6018405 Score = 120 bits (132), Expect = 3e-22 Identities = 101/124 (81%), Gaps = 0/124 (0%) Strand=Plus/Minus Query 4570 CTTCGTCTCTGCTAATCAGTTCGTTAGAAAACGTTAATCCGGGCATTAAACCTCTCTTTT 4629 |||| |||||||| || ||||| || |||||||| | ||| ||||| | |||||| || | Sbjct 2339026 CTTCATCTCTGCTGATGAGTTCATTGGAAAACGTAAGTCCAGGCATGAGACCTCTTTTCT 2338967 Query 4630 TAAGCCAAAATATAGCGGCAAATGACCCAGAAAAGAATATGCCTTCTACGGCGGCAAACG 4689 | |||||||||||||| ||||| || || || ||||| || |||||||| || ||||| | Sbjct 2338966 TTAGCCAAAATATAGCAGCAAAAGATCCTGAGAAGAAAATCCCTTCTACAGCAGCAAAAG 2338907 Query 4690 CTAC 4693 |||| Sbjct 2338906 CTAC 2338903 Score = 98.7 bits (108), Expect = 8e-16 Identities = 100/130 (77%), Gaps = 3/130 (2%) Strand=Plus/Minus Query 4921 AAAATCTTTCTACTAAGTTTTCGTTTACTATACCGTCACTGGCTGCAAAAAACGCCAAAA 4980 |||||||| || || ||||| || || || || ||||||||||||||||| ||||| | Sbjct 2329424 AAAATCTT---ACCAAATTTTCATTCACAATTCCATCACTGGCTGCAAAAAAGGCCAATA 2329368 Query 4981 CATGAGATATAAAGTACTGTTCGTCAGGCTTAAGTTTTTTCCAGTGGGGCAAATCTTTAG 5040 ||||| ||||| |||| || || | ||||| || |||||||| || | |||||| | Sbjct 2329367 TGTGAGAGATAAAATACTTCTCCTCTGATTTAAGCTTGTTCCAGTGAGGGAGATCTTTTG 2329308 Query 5041 TTAAATCAAC 5050 ||| ||||| Sbjct 2329307 ATAAGTCAAC 2329298 >seq17 Length=19722643 Score = 86.0 bits (94), Expect = 5e-12 Identities = 92/122 (75%), Gaps = 0/122 (0%) Strand=Plus/Minus Query 4572 TCGTCTCTGCTAATCAGTTCGTTAGAAAACGTTAATCCGGGCATTAAACCTCTCTTTTTA 4631 || |||||||| || ||||| || |||||||| | || ||||| | || | || || Sbjct 6749544 TCATCTCTGCTGATAAGTTCATTGGAAAACGTGAGGCCAGGCATCAGGCCGCGTTTCTTG 6749485 Query 4632 AGCCAAAATATAGCGGCAAATGACCCAGAAAAGAATATGCCTTCTACGGCGGCAAACGCT 4691 ||||| ||||| | ||||| || ||||||||||| || ||||| ||||| || || || Sbjct 6749484 AGCCAGAATATCGACGCAAAAGAACCAGAAAAGAAGATTCCTTCCACGGCAGCGAAGGCC 6749425 Query 4692 AC 4693 || Sbjct 6749424 AC 6749423 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427009092076739