Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Mustela_20putorius_20furo_20[refseq_20GCF_5F000215625.1_202011-06-
02] 7,783 sequences; 2,410,879,678 total letters
Query= NC_031033.1
Length=217124
Score E
Sequences producing significant alignments: (Bits) Value
seq133 118 1e-21
seq17 107 3e-18
seq141 102 1e-16
seq2363 98.7 1e-15
>seq133
Length=6340249
Score = 118 bits (130), Expect = 1e-21
Identities = 106/133 (80%), Gaps = 0/133 (0%)
Strand=Plus/Minus
Query 77127 TGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGAT 77186
||||||||||| ||||| ||||| ||||| || || || ||||| || ||||| | ||
Sbjct 5017076 TGAAATTCTCCTGACAAAACTCTGCGAGTATAGATGTTGCTGGTGTAAGGTTCGATGGAC 5017017
Query 77187 TCATTGTTTCCCAAAATTTGAGCAGTAGAAGCAGTTGGCATAGGTGCCACCAATAAACTA 77246
||||| ||||||| ||| |||||||| |||||||| ||||| || || | | ||||||
Sbjct 5017016 TCATTATTTCCCAGAATCTGAGCAGTTGAAGCAGTAGGCATCGGGGCAATAAGTAAACTG 5016957
Query 77247 TTTCTGAGACCAT 77259
||||| | |||||
Sbjct 5016956 TTTCTTATACCAT 5016944
Score = 98.7 bits (108), Expect = 1e-15
Identities = 111/149 (74%), Gaps = 0/149 (0%)
Strand=Plus/Minus
Query 78003 ACTCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTATGT 78062
||||||||||| || ||||| || ||||| || |||| || || || | || | |||
Sbjct 5007640 ACTCGTTTCATGAAAAGATCTGGAATCCAAAGGGCAAAGAAAAGGTCCCTGGCACGCTGT 5007581
Query 78063 TCTTCATTTCCTGTATTCTTTTTAAGATCGAGAAACTCCATAATATCAGAATGCCATGGT 78122
||||| |||||||| ||||| || | ||| |||||||| | ||| || ||||||| ||
Sbjct 5007580 TCTTCCTTTCCTGTGTTCTTCTTTAAATCAAGAAACTCAAAAATGTCTAAATGCCAAGGC 5007521
Query 78123 TCTAGATATATTGCCATAACTCCAGGTCG 78151
|| || || || || | | ||||||||
Sbjct 5007520 TCCAGGTAAATAGCAAATGCCCCAGGTCG 5007492
Score = 98.7 bits (108), Expect = 1e-15
Identities = 142/198 (72%), Gaps = 2/198 (1%)
Strand=Plus/Minus
Query 77355 GATCCATTATATGTTTCATAAGGTCCTT-CTGTTTCAGCTAGTTCACAACTCGCTTCCAA 77413
|| || | ||| |||||||| || || | || || | ||| |||| || ||||||||
Sbjct 5012404 GAGCCCTCATAGGTTTCATACGGGCCATGCTCCTTGGCCAAGT-CACAGCTGGCTTCCAA 5012346
Query 77414 TGCTCCGTAATAAATTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCAATACTATC 77473
||||| |||||||| ||||| || |||| ||| || || || ||||| ||| ||
Sbjct 5012345 GGCTCCATAATAAATGGTTTCAAAGATCTGCTTGTTCAGTAGCTGGGCTTCTGGACTCTC 5012286
Query 77474 AAACGGATAATGTAAAAGAATAAAGGCATCTGCTAATCCCTGAACTCCAATACCAATAGG 77533
||||||||| | |||||||| |||||||| | || || || || || ||||| ||
Sbjct 5012285 AAACGGATACCTCATCAGAATAAAAGCATCTGCCAGACCTTGTACCCCGATTCCAATGGG 5012226
Query 77534 TCTATGTCTCTTATTGGA 77551
| ||| | ||||| ||
Sbjct 5012225 GCGATGGCGTTTATTTGA 5012208
Score = 86.0 bits (94), Expect = 9e-12
Identities = 64/75 (85%), Gaps = 0/75 (0%)
Strand=Plus/Minus
Query 77915 ATATAGCCGTTCAAATTCATCTCCCCAAACATCATCCAATCCAGGGCATTCATTTGGGCA 77974
||||||| |||||||| ||||||||||| ||||||| ||||| ||||||||||| ||
Sbjct 5008096 ATATAGCTTCTCAAATTCCTCTCCCCAAACCTCATCCAGACCAGGACATTCATTTGGACA 5008037
Query 77975 CATCAATGACCAGTC 77989
|||||| ||||| ||
Sbjct 5008036 CATCAAAGACCAATC 5008022
>seq17
Length=19722643
Score = 107 bits (118), Expect = 3e-18
Identities = 95/119 (80%), Gaps = 0/119 (0%)
Strand=Plus/Minus
Query 48165 TCATCTCTACTAATTAATTCGTTAGAAAATGTGAGACCGGGCATTAGTCCACGTTTTTTG 48224
|||||||| || || | ||| || ||||| ||||| || ||||| || || ||||| |||
Sbjct 6749544 TCATCTCTGCTGATAAGTTCATTGGAAAACGTGAGGCCAGGCATCAGGCCGCGTTTCTTG 6749485
Query 48225 AGCCAAAATATTGCCGCGAAAGATCCAGAAAAGAATATGCCTTCTACGGCCGCAAATGC 48283
||||| ||||| | ||| ||||| ||||||||||| || ||||| ||||| || || ||
Sbjct 6749484 AGCCAGAATATCGACGCAAAAGAACCAGAAAAGAAGATTCCTTCCACGGCAGCGAAGGC 6749426
Score = 98.7 bits (108), Expect = 1e-15
Identities = 105/138 (76%), Gaps = 3/138 (2%)
Strand=Plus/Minus
Query 47795 TTAAAAGTCAACATCTAAAGAAAAATGATTATCTTCTTGA---GACATAACTCCCATTTT 47851
||| |||||| |||| || | |||| ||| ||| | || ||||| |||||||| |
Sbjct 6751029 TTAGAAGTCAGCATCCAAGGTAAAAGAATTCTCTGTTGGACTGGACATCACTCCCATCCT 6750970
Query 47852 TTGATATTCACCCACACGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTTTC 47911
||||| || || || | ||||| || || ||||| || ||||||| ||| ||||| ||
Sbjct 6750969 CTGATACTCGCCTACTCTCTTCTCAAAGAAGTTAGTCTTCCCTTCCAGTGAAATATTCTC 6750910
Query 47912 CATAAAATCAAATGGATT 47929
|||||| |||||||||||
Sbjct 6750909 CATAAAGTCAAATGGATT 6750892
>seq141
Length=6018405
Score = 102 bits (112), Expect = 1e-16
Identities = 95/121 (79%), Gaps = 0/121 (0%)
Strand=Plus/Minus
Query 48163 CTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGACCGGGCATTAGTCCACGTTTTT 48222
|||||||||| || || | ||| || ||||| || || || ||||| || || | ||| |
Sbjct 2339026 CTTCATCTCTGCTGATGAGTTCATTGGAAAACGTAAGTCCAGGCATGAGACCTCTTTTCT 2338967
Query 48223 TGAGCCAAAATATTGCCGCGAAAGATCCAGAAAAGAATATGCCTTCTACGGCCGCAAATG 48282
| ||||||||||| || || |||||||| || ||||| || |||||||| || ||||| |
Sbjct 2338966 TTAGCCAAAATATAGCAGCAAAAGATCCTGAGAAGAAAATCCCTTCTACAGCAGCAAAAG 2338907
Query 48283 C 48283
|
Sbjct 2338906 C 2338906
Score = 89.7 bits (98), Expect = 7e-13
Identities = 75/92 (82%), Gaps = 0/92 (0%)
Strand=Plus/Minus
Query 47852 TTGATATTCACCCACACGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTTTC 47911
|||||| || |||| |||||||| || ||||| ||||| |||||||| || || |||||
Sbjct 2352697 TTGATACTCTGCCACTCGTTTCTCAAAGAAATTTGTTTTCCCTTCCAAAGAAATGTTTTC 2352638
Query 47912 CATAAAATCAAATGGATTAACTGCATTATAAA 47943
|||||||||||| ||||| |||| | | |||
Sbjct 2352637 CATAAAATCAAAGGGATTTTCTGCCTGAAAAA 2352606
Score = 84.2 bits (92), Expect = 3e-11
Identities = 70/86 (81%), Gaps = 0/86 (0%)
Strand=Plus/Minus
Query 48638 TACTTCTTCAGCTGTCCAAAATGATGCCTCTGCTTTTTTATACATATTCCATATATCACT 48697
||| ||||| |||||||| || ||||||| ||| | ||||||||| ||||| || |||
Sbjct 2325599 TACCTCTTCTGCTGTCCAGAAGGATGCCTGTGCCTGTTTATACATTTTCCAAATGTCAGG 2325540
Query 48698 GTATTGGATTGGGAAAATAACAAATC 48723
|||||||||||| || || || ||||
Sbjct 2325539 GTATTGGATTGGAAAGATGACGAATC 2325514
>seq2363
Length=2743
Score = 98.7 bits (108), Expect = 1e-15
Identities = 104/137 (76%), Gaps = 0/137 (0%)
Strand=Plus/Minus
Query 78399 GTTCCTGCATTAAATAATGTCGGAGATGCATGCGTAAACCATTTTTCAGAAAGTAGATTG 78458
|| || ||||| || | || ||||| ||||| |||||||| | |||||||| || ||
Sbjct 2311 GTACCAGCATTGAAGAGAGTGGGAGAGGCATGGGTAAACCACCTCTCAGAAAGAAGGTTA 2252
Query 78459 TATGTTTCAATAGCTGATTCTATGTCCCATTGATGAATTCCTACCGCTACACGCATCAAC 78518
|||||||||||||| | || || || || |||||| || || | || | |||||||
Sbjct 2251 TATGTTTCAATAGCAGCATCAATATCTTCTTCATGAATCCCCACAGACACCCTCATCAAC 2192
Query 78519 ATATGCTGAGGTCTTTC 78535
||||| || ||||||||
Sbjct 2191 ATATGTTGTGGTCTTTC 2175
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 694601217409120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |