Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mustela_20putorius_20furo_20[refseq_20GCF_5F000215625.1_202011-06- 02] 7,783 sequences; 2,410,879,678 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq161 141 2e-28 seq65 141 2e-28 seq101 140 7e-28 seq323 138 3e-27 seq50 138 3e-27 seq39 132 1e-25 seq2 127 5e-24 seq237 125 2e-23 >seq161 Length=5000004 Score = 141 bits (156), Expect = 2e-28 Identities = 169/228 (74%), Gaps = 6/228 (3%) Strand=Plus/Minus Query 151883 CCTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGT 151942 ||| || | ||| || || || ||||| |||||||| |||||||||||||| | | ||| Sbjct 410111 CCTCAGACGGAGAACCAGGTGGAGAGTTGACTCTTTCTGGATGTTGTAATCAGAAAGAGT 410052 Query 151943 TCTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCC 152002 | ||||||||||| || || || |||||||||||||||||||| | | ||| || Sbjct 410051 GCGGCCATCTTCTAGCTGCTTGCCAGCAAAGATAAGCCTCTGCTGGTCAGGGGGGATGCC 409992 Query 152003 TTCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACT---CTCTACTTC 152059 ||||| ||||| || || ||| ||| | || | | |||| ||| ||| || || Sbjct 409991 CTCCTTATCTTGGATCTTGGCTTTCACATTTTCGATGGTGTC---ACTGGGCTCCACCTC 409935 Query 152060 AAGAGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107 || || || || ||||| || || ||||||||||| | ||||||||| Sbjct 409934 CAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAAATCTGCATTTT 409887 Score = 132 bits (146), Expect = 1e-25 Identities = 164/222 (74%), Gaps = 7/222 (3%) Strand=Plus/Minus Query 151883 CCTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGT 151942 ||| || | ||| || || || ||||| |||||||| |||||||||||||| | | ||| Sbjct 410338 CCTCAGACGGAGAACCAGGTGGAGAGTTGACTCTTTCTGGATGTTGTAATCAGAAAGAGT 410279 Query 151943 TCTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCC 152002 | ||||||||||| || ||||| ||||||||||||||||||| | | | ||| || Sbjct 410278 GCAGCCATCTTCTAGCTGCTTGCCGGCAAAGATAAGCCTCTGCTGGT-CACGGGGATGCC 410220 Query 152003 TTCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACT---CTCTACTTC 152059 || || ||||| || || || ||| | || | | |||| ||| ||| || || Sbjct 410219 CTCTTTATCTTGGATCTTGGCCTTTACATTTTCAATGGTGTC---ACTGGGCTCCACCTC 410163 Query 152060 AAGAGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTG 152101 ||||| || || ||||| || || ||||||||||||| ||| Sbjct 410162 CAGAGTGATGGTCTTGCCAGTCAGGGTCTTCACGAAGATCTG 410121 >seq65 Length=10028950 Score = 141 bits (156), Expect = 2e-28 Identities = 161/215 (75%), Gaps = 6/215 (3%) Strand=Plus/Minus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 ||||| ||||| || || |||||||| |||||||||||||| | | ||| | |||||| Sbjct 4318167 AGGACCAGATGCAGGGTGGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCT 4318108 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || || || || || |||||||||||||||||||| | | ||| ||||| || ||| Sbjct 4318107 TCGAGCTGCTTGCCAGCAAAGATAAGCCTCTGCTGGTCAGGGGGGATGCCTTCTTTGTCT 4318048 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACT---CTCTACTTCAAGAGTAATA 152069 || || || | || ||| | || | | |||| ||| ||| || || ||||| || Sbjct 4318047 TGGATCTTGTCCTTTACATTTTCAATGGTGTC---ACTGGGCTCCACCTCCAGAGTGATG 4317991 Query 152070 GTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || ||||| || || ||||||||||||| |||||| Sbjct 4317990 GTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 4317956 Score = 136 bits (150), Expect = 9e-27 Identities = 158/213 (74%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951 ||| || || || ||||| |||||||| |||||||||||||| | | ||| | ||||| Sbjct 4318396 GAGAACCAGGTGGAGAGTTGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATC 4318337 Query 151952 TTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTC 152011 |||||| || || || |||||||||||||||||||| | | ||| || ||||| || Sbjct 4318336 TTCTAGCTGCTTGCCTGCAAAGATAAGCCTCTGCTGGTCAGGGGGGATGCCCTCCTTATC 4318277 Query 152012 TTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGT 152071 ||| || || || ||| | || | | |||| | ||| || || || || || || Sbjct 4318276 TTGGATCTTGGCCTTTACATTTTCAATGGTGTCACTAGGCTCCACCTCCAGGGTGATGGT 4318217 Query 152072 TTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 ||||| || || ||||||||||||| |||||| Sbjct 4318216 CTTGCCAGTCAGGGTCTTCACGAAGATCTGCAT 4318184 Score = 100 bits (110), Expect = 7e-16 Identities = 99/128 (77%), Gaps = 0/128 (0%) Strand=Plus/Minus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 ||||| ||||| ||||| || ||||| |||||||||||||| | | ||| | |||||| Sbjct 4317939 AGGACCAGATGCAGAGTGGATTCTTTCTGGATGTTGTAATCAGAAAGAGTACGGCCATCT 4317880 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || || || || || |||||||||||||||||||| | | ||| || ||||| ||| Sbjct 4317879 TCCAGCTGCTTGCCAGCAAAGATAAGCCTCTGCTGGTCAGGGGGGATGCCCTCCTTATCT 4317820 Query 152013 TGAATTTT 152020 || || || Sbjct 4317819 TGGATCTT 4317812 >seq101 Length=7325712 Score = 140 bits (154), Expect = 7e-28 Identities = 158/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 ||||| ||||| ||||| || || || |||||||||||||| | | ||| | |||||| Sbjct 127584 AGGACCAGATGCAGAGTGGATTCGTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCT 127643 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || || || || || |||||||||||||||||||| | | ||| || ||||| ||| Sbjct 127644 TCCAGCTGCTTGCCAGCAAAGATAAGCCTCTGCTGGTCAGGGGGGATGCCCTCCTTATCT 127703 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072 || || || ||| ||| | || | | |||| | ||| || || ||||| || || Sbjct 127704 TGGATCTTGGCTTTCACATTTTCAATGGTGTCACTAGGCTCCACCTCCAGAGTGATGGTC 127763 Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 ||||| || || ||||||||||||| |||||| Sbjct 127764 TTGCCAGTCAGGGTCTTCACGAAGATCTGCAT 127795 Score = 127 bits (140), Expect = 5e-24 Identities = 160/217 (74%), Gaps = 7/217 (3%) Strand=Plus/Plus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 ||||| || || ||||| |||||||| |||||||||||||| | | ||| | |||||| Sbjct 127812 AGGACCAGGTGCAGAGTGGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCT 127871 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || || || || || |||||||||||||||||||| | | ||| || || || ||| Sbjct 127872 TCCAGCTGCTTGCCAGCAAAGATAAGCCTCTGCTGGTCGGGGGGGATGCCCTCTTTGTCT 127931 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGT--CTGAACTCTCTACTTCAAGAGTAATAG 152070 || || || || ||| ||| || ||| |||| ||| || || || || || | Sbjct 127932 TGGATCTTGGCCTTCACATTCT---CGGTGTCACTGA--GCTCCACCTCCAGGGTGATGG 127986 Query 152071 TTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107 | ||||| || || ||||||||||| | ||||||||| Sbjct 127987 TCTTGCCGGTCAGGGTCTTCACGAAAATCTGCATTTT 128023 >seq323 Length=1159590 Score = 138 bits (152), Expect = 3e-27 Identities = 162/218 (74%), Gaps = 6/218 (3%) Strand=Plus/Plus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 ||||| || || ||||| |||||||| |||||||||||||| | | ||| | |||||| Sbjct 303408 AGGACCAGGTGCAGAGTGGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCT 303467 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || || || || || |||||||||||||||||||| | | ||| || ||||| ||| Sbjct 303468 TCCAGCTGCTTGCCAGCAAAGATAAGCCTCTGCTGGTCGGGGGGGATGCCCTCCTTATCT 303527 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACT---CTCTACTTCAAGAGTAATA 152069 || || || || ||| |||| | | |||| ||| ||| || || || || || Sbjct 303528 TGGATCTTGGCCTTCACATTCTCGATGGTGTC---ACTGGGCTCCACCTCCAGGGTGATG 303584 Query 152070 GTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107 || ||||| || || ||||||||||| | ||||||||| Sbjct 303585 GTCTTGCCGGTCAGGGTCTTCACGAAAATCTGCATTTT 303622 >seq50 Length=12588045 Score = 138 bits (152), Expect = 3e-27 Identities = 167/225 (74%), Gaps = 7/225 (3%) Strand=Plus/Plus Query 151883 CCTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGT 151942 ||| || | ||| || || || ||||| |||||||| |||||||||||||| | | ||| Sbjct 11770180 CCTCAGACGGAGAACCAGGTGGAGAGTTGACTCTTTCTGGATGTTGTAATCAGAAAGAGT 11770239 Query 151943 TCTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCC 152002 | ||||||||||| || ||||| ||||||||||||||||||| | | | ||| || Sbjct 11770240 GCAGCCATCTTCTAGCTGCTTGCCGGCAAAGATAAGCCTCTGCTGGT-CACGGGGATGCC 11770298 Query 152003 TTCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACT---CTCTACTTC 152059 || || ||||| || || || ||| | || | | |||| ||| ||| || || Sbjct 11770299 CTCTTTATCTTGGATCTTGGCCTTTACATTTTCAATGGTGTC---ACTGGGCTCCACCTC 11770355 Query 152060 AAGAGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 ||||| || || ||||| || || ||||||||||||| |||||| Sbjct 11770356 CAGAGTGATGGTCTTGCCAGTCAGGGTCTTCACGAAGATCTGCAT 11770400 Score = 120 bits (132), Expect = 7e-22 Identities = 159/217 (73%), Gaps = 4/217 (2%) Strand=Plus/Plus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 ||||| || || || || |||||||| |||||||||||||| | | ||| |||||| Sbjct 11770645 AGGACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGTGGCCATCT 11770704 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || || || ||||| ||||||||||||||||| || | ||| || || || ||| Sbjct 11770705 TCCAGCTGCTTGCCGGCAAAGATAAGCCTCTGCTGATCGTGGGGGATGCCCTCTTTATCT 11770764 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTC--TGAACTCTCTACTTCAAGAGTAATAG 152070 || || || || ||| |||| | | |||| || ||| | ||||||| || || | Sbjct 11770765 TGGATCTTGGCCTTCACATTCTCGATGGTGTCATTGGGCTC-CACCTTCAAG-GTGATGG 11770822 Query 152071 TTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107 | ||||| || || ||||||||||| | ||||||||| Sbjct 11770823 TCTTGCCGGTCAGGGTCTTCACGAAAATCTGCATTTT 11770859 Score = 95.1 bits (104), Expect = 3e-14 Identities = 152/216 (70%), Gaps = 7/216 (3%) Strand=Plus/Plus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 ||||| || || || || |||||||| |||||||||||||| | | ||| |||||| Sbjct 11770416 AGGACTAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGTGGCCATCT 11770475 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTC-CGCCGAGATTCCTTCCTTTTC 152011 || || || || || || ||||||||||||||||| | | ||| || || || || Sbjct 11770476 TCCAGCTGCTTGCCAGCAAAAATAAGCCTCTGCTGGTCAGGGGGGGATGCCCTCTTTATC 11770535 Query 152012 TTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACT---CTCTACTTCAAGAGTAAT 152068 ||| || || || ||| | | | | |||| ||| ||| || || || || || Sbjct 11770536 TTGGATCTTGGCCTTCACATTTTTGATGGTGTC---ACTGGGCTCCACCTCCAGGGTGAT 11770592 Query 152069 AGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || ||||| || || ||||||| ||||| ||| || Sbjct 11770593 GGTCTTGCCAGTCAGGGTCTTCATGAAGATCTGTAT 11770628 >seq39 Length=13401118 Score = 132 bits (146), Expect = 1e-25 Identities = 165/225 (73%), Gaps = 6/225 (3%) Strand=Plus/Minus Query 151884 CTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTT 151943 ||||| | |||||| || || ||||| ||||| || ||||||||||| |||| | || Sbjct 1513504 CTGAGGCGGAGGACCAGGTGCAGAGTCGACTCCTTCTGGATGTTGTAGTCGGACAGGGTG 1513445 Query 151944 CTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCT 152003 | |||||| || || |||||| || ||||| | |||||||||||| | | ||| || Sbjct 1513444 CGCCCATCCTCCAGCTGTTTCCCAGCAAAGATCAACCTCTGCTGGTCAGGGGGGATGCCC 1513385 Query 152004 TCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACT---CTCTACTTCA 152060 ||||| || || || || ||||| |||| | | |||| ||| ||| || || Sbjct 1513384 TCCTTGTCCTGGATCTTCGCCTTGACGTTCTCGATGGTGTC---ACTGGGCTCCACCTCC 1513328 Query 152061 AGAGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATT 152105 || || || || || ||||| || ||||||||||||| ||||||| Sbjct 1513327 AGGGTGATGGTCTTACCCGTCAGGGTCTTCACGAAGATCTGCATT 1513283 >seq2 Length=40953715 Score = 127 bits (140), Expect = 5e-24 Identities = 159/218 (73%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 151887 AGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTC 151946 ||||| | |||||||||||||| ||||| ||||| |||||||| || | ||||| | Sbjct 19232380 AGTCTCAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTACGT 19232439 Query 151947 CCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCC 152006 |||||||| || || || || ||||| || |||||||| || | | ||||||||| Sbjct 19232440 CCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTCTGCTGATCAGGAGGAATTCCTTCC 19232499 Query 152007 TTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTA 152066 || || ||||| ||| || ||| | |||| | || || || || || |||||| Sbjct 19232500 TTGTCCTGAATCTTTGCCTTCACATTTTCTATTGTATCCGAGGGTTCAACCTCGAGAGTA 19232559 Query 152067 ATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || || ||||| || || || ||||| | |||||| Sbjct 19232560 ATGGTCTTCCCCGTAAGGGTTTTTACGAAAATCTGCAT 19232597 >seq237 Length=2526385 Score = 125 bits (138), Expect = 2e-23 Identities = 152/206 (74%), Gaps = 6/206 (3%) Strand=Plus/Plus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 || || || |||||||| ||||| || ||||||||||| |||| | || | |||||| Sbjct 2103814 AGAACCAGGTGAAGAGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGCCCATCC 2103873 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || || ||||||||| ||||| | |||||||||||| | | ||| || || || ||| Sbjct 2103874 TCCAGCTGTTTCCCGGCAAAGATCAACCTCTGCTGGTCAGGGGGGATGCCCTCTTTCTCT 2103933 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACT---CTCTACTTCAAGAGTAATA 152069 ||||| || ||| ||| |||| | | |||| ||| ||| || || || || || Sbjct 2103934 TGAATCTTCCCTTTCACATTCTCGATGGTGTC---ACTGGGCTCCACCTCCAGGGTGATG 2103990 Query 152070 GTTTTGCCCGTGAGAGTCTTCACGAA 152095 || || ||||| || ||||||||||| Sbjct 2103991 GTCTTACCCGTCAGGGTCTTCACGAA 2104016 Score = 95.1 bits (104), Expect = 3e-14 Identities = 103/137 (75%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 151884 CTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTT 151943 ||||| | |||||| || || ||||| ||||| || ||||||||||| |||| | || Sbjct 2104061 CTGAGGCGGAGGACCAGGTGCAGAGTCGACTCCTTCTGGATGTTGTAGTCGGACAGGGTG 2104120 Query 151944 CTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCT 152003 | |||||| || || |||||| || ||||| | |||||||||||| | | ||| || Sbjct 2104121 CGCCCATCCTCCAGCTGTTTCCCAGCAAAGATCAACCTCTGCTGGTCAGGGGGGATGCCC 2104180 Query 152004 TCCTTTTCTTGAATTTT 152020 ||||| || || || || Sbjct 2104181 TCCTTGTCCTGGATCTT 2104197 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153705741350393