Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mustela_20putorius_20furo_20[refseq_20GCF_5F000215625.1_202011-06- 02] 7,783 sequences; 2,410,879,678 total letters Query= NC_031761.1 Length=131855 Score E Sequences producing significant alignments: (Bits) Value seq65 89.7 4e-13 >seq65 Length=10028950 Score = 89.7 bits (98), Expect = 4e-13 Identities = 157/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 111100 ATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111159 ||||| || || || || || |||||||||| ||||| || |||| ||| ||||| Sbjct 4317956 ATGCAGATCTTCGTGAAGACCCTGACCGGCAAGACCATCACTCTGGAGGTGGAGCCCAGT 4318015 Query 111160 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111219 || | ||| | ||||| | || || |||||||||||| | ||| || || Sbjct 4318016 GACACCATTGAAAATGTAAAGGACAAGATCCAAGACAAAGAAGGCATCCCCCCTGACCAG 4318075 Query 111220 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111279 || |||||||| | ||| ||||| || | |||||| ||| | | ||||| || Sbjct 4318076 CAGAGGCTTATCTTTGCTGGCAAGCAGCTCGAAGATGGCCGCACTCTTTCTGATTACAAC 4318135 Query 111280 ATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGGCA 111328 || || ||||| || || || ||| | || |||| ||| | ||||||| Sbjct 4318136 ATCCAGAAAGAGTCCACCCTGCATCTGGTCCTGCGCCTGAGGGGTGGCA 4318184 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421771188966808