Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mustela_20putorius_20furo_20[refseq_20GCF_5F000215625.1_202011-06- 02] 7,783 sequences; 2,410,879,678 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq39 154 1e-32 seq237 136 3e-27 seq2 136 3e-27 seq65 125 5e-24 seq323 123 2e-23 seq101 116 3e-21 seq50 111 1e-19 seq161 107 1e-18 >seq39 Length=13401118 Score = 154 bits (170), Expect = 1e-32 Identities = 175/232 (75%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 ||| |||||||| || | | |||||||| || || |||||| ||||||||||| || Sbjct 1513514 CATGCCCCCTCTGAGGCGGAGGACCAGGTGCAGAGTCGACTCCTTCTGGATGTTGTAGTC 1513455 Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226 || || |||| | || |||||||| ||||| ||||||||||| | |||||| || | Sbjct 1513454 GGACAGGGTGCGCCCATCCTCCAGCTGTTTCCCAGCAAAGATCAACCTCTGCTGGTCAGG 1513395 Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATT 44285 || | || ||||| ||| |||||| ||| | |||| | |||||||| || | Sbjct 1513394 GGGGATGCCCTCCTTGTCCTGGATCTTCGCCTTGAC-GTTCTCGATGGTGTCACTGGGCT 1513336 Query 44286 CCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||||||||| || || ||||| ||||| ||||||||||||||||| ||||| Sbjct 1513335 CCACCTCCAGGGTGATGGTCTTACCCGTCAGGGTCTTCACGAAGATCTGCAT 1513284 Score = 91.5 bits (100), Expect = 1e-13 Identities = 88/113 (78%), Gaps = 0/113 (0%) Strand=Plus/Minus Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCG 44170 || || |||| | || ||||||||||| ||| |||||| ||||||||||| |||| Sbjct 1515795 CCACCCCTCAAGCGCAGAACCAGGTGAAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAC 1515736 Query 44171 AGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATC 44223 || |||| | || |||||||| ||||| ||||||||||| | |||||| || Sbjct 1515735 AGGGTGCGCCCATCCTCCAGCTGTTTCCCAGCAAAGATCAACCTCTGCTGGTC 1515683 >seq237 Length=2526385 Score = 136 bits (150), Expect = 3e-27 Identities = 161/218 (74%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCG 44170 || || |||| | || ||||||||||| ||| |||||| ||||||||||| |||| Sbjct 2103799 CCACCCCTCAAGCGCAGAACCAGGTGAAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAC 2103858 Query 44171 AGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGC 44230 || |||| | || |||||||| ||||||||||||||||| | |||||| || | || Sbjct 2103859 AGGGTGCGCCCATCCTCCAGCTGTTTCCCGGCAAAGATCAACCTCTGCTGGTCAGGGGGG 2103918 Query 44231 ACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACC 44290 | || || || || |||||| |||| | | |||||||| || |||||| Sbjct 2103919 ATGCCCTCTTTCTCTTGAATCTTCCCTTTCACATTCTCGATGGTGTCACTGGGCTCCACC 2103978 Query 44291 TCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAA 44328 |||| || || ||||| ||||| |||||||||||||| Sbjct 2103979 TCCAGGGTGATGGTCTTACCCGTCAGGGTCTTCACGAA 2104016 Score = 95.1 bits (104), Expect = 9e-15 Identities = 109/147 (74%), Gaps = 0/147 (0%) Strand=Plus/Plus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 ||| |||||||| || | | |||||||| || || |||||| ||||||||||| || Sbjct 2104051 CATGCCCCCTCTGAGGCGGAGGACCAGGTGCAGAGTCGACTCCTTCTGGATGTTGTAGTC 2104110 Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226 || || |||| | || |||||||| ||||| ||||||||||| | |||||| || | Sbjct 2104111 GGACAGGGTGCGCCCATCCTCCAGCTGTTTCCCAGCAAAGATCAACCTCTGCTGGTCAGG 2104170 Query 44227 AGGCACACCTTCCTTTTCCGTTATCTT 44253 || | || ||||| ||| ||||| Sbjct 2104171 GGGGATGCCCTCCTTGTCCTGGATCTT 2104197 >seq2 Length=40953715 Score = 136 bits (150), Expect = 3e-27 Identities = 161/218 (74%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 44120 AGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGC 44179 ||||||||||| || ||||| ||| ||||||||| |||||||| || | | || Sbjct 19232380 AGTCTCAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTACGT 19232439 Query 44180 TCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCC 44239 | || ||||| ||||| || |||||||||| | ||||||||| | ||| | |||||| Sbjct 19232440 CCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTCTGCTGATCAGGAGGAATTCCTTCC 19232499 Query 44240 TTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTA 44299 || ||| ||||| ||||| || |||| || || | || ||| ||||| | ||| Sbjct 19232500 TTGTCCTGAATCTTTGCCTTCACATTTTCTATTGTATCCGAGGGTTCAACCTCGAGAGTA 19232559 Query 44300 ATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || ||||| ||||| ||||| || ||||| || ||||| Sbjct 19232560 ATGGTCTTCCCCGTAAGGGTTTTTACGAAAATCTGCAT 19232597 >seq65 Length=10028950 Score = 125 bits (138), Expect = 5e-24 Identities = 167/232 (72%), Gaps = 0/232 (0%) Strand=Plus/Minus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 ||| || || ||||| | || ||||| || || ||| ||| || |||||||||||||| Sbjct 4318186 CATGCCACCCCTCAGGCGCAGGACCAGATGCAGGGTGGACTCTTTCTGGATGTTGTAATC 4318127 Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226 | || ||| | || || |||||||| || |||||||| | | |||||| || | Sbjct 4318126 AGAAAGAGTGCGGCCATCTTCGAGCTGCTTGCCAGCAAAGATAAGCCTCTGCTGGTCAGG 4318067 Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTC 44286 || | ||||| || || ||||| | ||| | || | |||||||| || || Sbjct 4318066 GGGGATGCCTTCTTTGTCTTGGATCTTGTCCTTTACATTTTCAATGGTGTCACTGGGCTC 4318007 Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 |||||||| || || ||||| || || ||||||||||||||||| |||||| Sbjct 4318006 CACCTCCAGAGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCATG 4317955 Score = 109 bits (120), Expect = 4e-19 Identities = 150/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 |||||||| || || ||| || |||||||||||||| | || ||| | || || Sbjct 4318392 ACCAGGTGGAGAGTTGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCTTCT 4318333 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 |||||||| || |||||||| | | |||||| || | || | || ||||| || Sbjct 4318332 AGCTGCTTGCCTGCAAAGATAAGCCTCTGCTGGTCAGGGGGGATGCCCTCCTTATCTTGG 4318273 Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308 ||||| ||| | || | |||||||| | |||||||||| || || ||||| Sbjct 4318272 ATCTTGGCCTTTACATTTTCAATGGTGTCACTAGGCTCCACCTCCAGGGTGATGGTCTTG 4318213 Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 || || ||||||||||||||||| |||||| Sbjct 4318212 CCAGTCAGGGTCTTCACGAAGATCTGCATG 4318183 >seq323 Length=1159590 Score = 123 bits (136), Expect = 2e-23 Identities = 166/231 (72%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 ||| || || ||||| | || |||||||| || ||| ||| || |||||||||||||| Sbjct 303389 CATGCCACCCCTCAGGCGCAGGACCAGGTGCAGAGTGGACTCTTTCTGGATGTTGTAATC 303448 Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226 | || ||| | || ||||||||||| || |||||||| | | |||||| || | Sbjct 303449 AGAAAGAGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATAAGCCTCTGCTGGTCGGG 303508 Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTC 44286 || | || ||||| || ||||| ||||| | | |||||||| || || Sbjct 303509 GGGGATGCCCTCCTTATCTTGGATCTTGGCCTTCACATTCTCGATGGTGTCACTGGGCTC 303568 Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 |||||||| || || ||||| || || |||||||||||||| || ||||| Sbjct 303569 CACCTCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAAATCTGCAT 303619 >seq101 Length=7325712 Score = 116 bits (128), Expect = 3e-21 Identities = 165/232 (71%), Gaps = 0/232 (0%) Strand=Plus/Plus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 ||| || |||||||| | | ||||| || || ||| || || |||||||||||||| Sbjct 127565 CATGCCACCTCTCAGCCAAAGGACCAGATGCAGAGTGGATTCGTTCTGGATGTTGTAATC 127624 Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226 | || ||| | || ||||||||||| || |||||||| | | |||||| || | Sbjct 127625 AGAAAGAGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATAAGCCTCTGCTGGTCAGG 127684 Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTC 44286 || | || ||||| || ||||| |||| || | |||||||| | || Sbjct 127685 GGGGATGCCCTCCTTATCTTGGATCTTGGCTTTCACATTTTCAATGGTGTCACTAGGCTC 127744 Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 |||||||| || || ||||| || || ||||||||||||||||| |||||| Sbjct 127745 CACCTCCAGAGTGATGGTCTTGCCAGTCAGGGTCTTCACGAAGATCTGCATG 127796 Score = 107 bits (118), Expect = 1e-18 Identities = 164/232 (71%), Gaps = 5/232 (2%) Strand=Plus/Plus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 ||| || || ||||| | || |||||||| || ||| ||| || |||||||||||||| Sbjct 127793 CATGCCACCCCTCAGGCGCAGGACCAGGTGCAGAGTGGACTCTTTCTGGATGTTGTAATC 127852 Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226 | || ||| | || ||||||||||| || |||||||| | | |||||| || | Sbjct 127853 AGAAAGAGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATAAGCCTCTGCTGGTCGGG 127912 Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCA-ATGTTCCTATGGTGTCGGCGGATT 44285 || | || || || || ||||| ||||| || || |||||| | | Sbjct 127913 GGGGATGCCCTCTTTGTCTTGGATCTTGGCCTTCACATTCTC----GGTGTCACTGAGCT 127968 Query 44286 CCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||||||||| || || ||||| || || |||||||||||||| || ||||| Sbjct 127969 CCACCTCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAAATCTGCAT 128020 >seq50 Length=12588045 Score = 111 bits (122), Expect = 1e-19 Identities = 166/233 (71%), Gaps = 6/233 (3%) Strand=Plus/Plus Query 44108 ATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCG 44167 || || || ||| | | || |||||||| || ||| ||| || |||||||||||||| Sbjct 11770627 ATGCCACCCCTCCGGCGCAGGACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAATCA 11770686 Query 44168 G--CGAGT-TGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCT 44224 | |||| |||| | || ||||||||||| ||||||||||| | | ||||||||| Sbjct 11770687 GAAAGAGTGTGGC---CATCTTCCAGCTGCTTGCCGGCAAAGATAAGCCTCTGCTGATCG 11770743 Query 44225 GAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGAT 44284 || | || || || || ||||| ||||| | | |||||||| || Sbjct 11770744 TGGGGGATGCCCTCTTTATCTTGGATCTTGGCCTTCACATTCTCGATGGTGTCATTGGGC 11770803 Query 44285 TCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||||||| || || || ||||| || || |||||||||||||| || ||||| Sbjct 11770804 TCCACCTTCAAGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAAATCTGCAT 11770856 Score = 102 bits (112), Expect = 6e-17 Identities = 160/228 (70%), Gaps = 1/228 (0%) Strand=Plus/Plus Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCG 44170 || || ||||| | | |||||||| || || ||| || |||||||||||||| | Sbjct 11770175 CCACCCCTCAGACGGAGAACCAGGTGGAGAGTTGACTCTTTCTGGATGTTGTAATCAGAA 11770234 Query 44171 AGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGC 44230 || || | || || |||||||| ||||||||||| | | |||||| || || Sbjct 11770235 AGAGTGCAGCCATCTTCTAGCTGCTTGCCGGCAAAGATAAGCCTCTGCTGGTCACGGGG- 11770293 Query 44231 ACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACC 44290 | || || || || ||||| ||| | || | |||||||| || |||||| Sbjct 11770294 ATGCCCTCTTTATCTTGGATCTTGGCCTTTACATTTTCAATGGTGTCACTGGGCTCCACC 11770353 Query 44291 TCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 |||| || || ||||| || || ||||||||||||||||| |||||| Sbjct 11770354 TCCAGAGTGATGGTCTTGCCAGTCAGGGTCTTCACGAAGATCTGCATG 11770401 Score = 91.5 bits (100), Expect = 1e-13 Identities = 151/214 (71%), Gaps = 7/214 (3%) Strand=Plus/Plus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGG--CGAGT-TGGCGCTCGTCG 44185 || ||||| || ||| ||| || |||||||||||||| | |||| |||| | || Sbjct 11770419 ACTAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGTGGC---CATCT 11770475 Query 44186 TCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATC-TGAAGGCACACCTTCCTTTTC 44244 ||||||||||| || ||||| || | | |||||| || | || | || || || || Sbjct 11770476 TCCAGCTGCTTGCCAGCAAAAATAAGCCTCTGCTGGTCAGGGGGGGATGCCCTCTTTATC 11770535 Query 44245 CGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGT 44304 ||||| ||||| || |||||||| || |||||||||| || || || Sbjct 11770536 TTGGATCTTGGCCTTCACATTTTTGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGT 11770595 Query 44305 CTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 ||| || || |||||||||| |||||| || ||| Sbjct 11770596 CTTGCCAGTCAGGGTCTTCATGAAGATCTGTATG 11770629 >seq161 Length=5000004 Score = 107 bits (118), Expect = 1e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCG 44170 || || ||||| | | |||||||| || || ||| || |||||||||||||| | Sbjct 410116 CCACCCCTCAGACGGAGAACCAGGTGGAGAGTTGACTCTTTCTGGATGTTGTAATCAGAA 410057 Query 44171 AGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGC 44230 || ||| | || || |||||||| || |||||||| | | |||||| || | || Sbjct 410056 AGAGTGCGGCCATCTTCTAGCTGCTTGCCAGCAAAGATAAGCCTCTGCTGGTCAGGGGGG 409997 Query 44231 ACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACC 44290 | || ||||| || ||||| |||| || | |||||||| || |||||| Sbjct 409996 ATGCCCTCCTTATCTTGGATCTTGGCTTTCACATTTTCGATGGTGTCACTGGGCTCCACC 409937 Query 44291 TCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 |||| || || ||||| || || |||||||||||||| || ||||| Sbjct 409936 TCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAAATCTGCAT 409890 Score = 95.1 bits (104), Expect = 9e-15 Identities = 156/224 (70%), Gaps = 1/224 (0%) Strand=Plus/Minus Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCG 44170 || || ||||| | | |||||||| || || ||| || |||||||||||||| | Sbjct 410343 CCACCCCTCAGACGGAGAACCAGGTGGAGAGTTGACTCTTTCTGGATGTTGTAATCAGAA 410284 Query 44171 AGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGC 44230 || || | || || |||||||| ||||||||||| | | |||||| || || Sbjct 410283 AGAGTGCAGCCATCTTCTAGCTGCTTGCCGGCAAAGATAAGCCTCTGCTGGTC-ACGGGG 410225 Query 44231 ACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACC 44290 | || || || || ||||| ||| | || | |||||||| || |||||| Sbjct 410224 ATGCCCTCTTTATCTTGGATCTTGGCCTTTACATTTTCAATGGTGTCACTGGGCTCCACC 410165 Query 44291 TCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTG 44334 |||| || || ||||| || || ||||||||||||||||| || Sbjct 410164 TCCAGAGTGATGGTCTTGCCAGTCAGGGTCTTCACGAAGATCTG 410121 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359956252998111