Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Mustela_20putorius_20furo_20[refseq_20GCF_5F000215625.1_202011-06-
02] 7,783 sequences; 2,410,879,678 total letters
Query= NC_033176.1
Length=224064
Score E
Sequences producing significant alignments: (Bits) Value
seq403 181 2e-40
seq218 129 8e-25
>seq403
Length=533493
Score = 181 bits (200), Expect = 2e-40
Identities = 186/243 (77%), Gaps = 0/243 (0%)
Strand=Plus/Plus
Query 9244 ATGAGTCGAGTGGTCTGGAACAGTTGCTCGTCACTCCATTCTGGATGTTCTTGTTTCAGA 9303
||||| || | ||||||||||| |||| ||| ||| ||||| || || ||||||||
Sbjct 188589 ATGAGCCGGCTCGTCTGGAACAGACGCTCATCATCCCACTCTGGGTGCTCCTGTTTCAGC 188648
Query 9304 ACATCGCACACCCTGTTGTGTTCCCTGAGCCAGATAGTGGCGTACATCATGAGCCCAGGT 9363
||||| ||||| ||||| ||||||| |||||||| ||||| |||||||| || |||||
Sbjct 188649 ACATCACACACTCTGTTATGTTCCCGCAGCCAGATCGTGGCATACATCATCAGACCAGGC 188708
Query 9364 ACCAGGCCAAAAGCCTCTTGACCGACAGCCAGACGCATGTTTTCGGGCACTTCGGGAGGA 9423
||||| ||||| | || || || ||||| | |||| || ||| || || | ||| ||
Sbjct 188709 ACCAGCCCAAAGACTTCCTGGCCCACAGCAAACCGCAGGTGTTCAGGAACATGGGGTGGG 188768
Query 9424 TAGATCATGTGCACCTGGACGTCTTTGACCGAGGGGGGATACATTTCACCGTCAATCATC 9483
|||||||| | |||||| |||||||| | ||| ||||||| || || ||||| | |
Sbjct 188769 TAGATCATCTCCACCTGAGTATCTTTGACTGTGGGAGGATACACCTCTCCATCAATTACC 188828
Query 9484 TGA 9486
|||
Sbjct 188829 TGA 188831
Score = 170 bits (188), Expect = 3e-37
Identities = 219/302 (73%), Gaps = 0/302 (0%)
Strand=Plus/Plus
Query 8283 GAACTCGGAACGCGGCCAACGGACACCCCTTGACGTTGCTACAGACTAGAGACTGAATAG 8342
|||| | ||| || | || ||||| ||||| |||||| | |||| ||||||||||| |
Sbjct 186990 GAACACTGAATGCAGTAAAAGGACAGCCCTTCACGTTGTTGCAGATGAGAGACTGAATGG 187049
Query 8343 TTGCGCTCTTGACGATCCCGAACCCCACGTCTCCGCCGAAGGTGCTGGGCTTCCAGTACC 8402
|| | |||| ||| || || || ||||| ||||| || || |||||||||||
Sbjct 187050 AGGCAGTGTTGATGATTTTAAAGCCTACTTCTCCACCGAAAGTACTAGGCTTCCAGTAGT 187109
Query 8403 CCGGGGAGCAGATGACGTTCGCCATGAGGCCTTTGAGGGAGAACGGAGCCCCCAACTCGA 8462
| || || |||||| || |||| || ||||| | |||||| || || |||| || |
Sbjct 187110 CAGGCGAACAGATGGGATTACCCATAAGTCCTTTCAAGGAGAATGGTGCTCCCATTTCTA 187169
Query 8463 GAATGCTCTCACCGAAGATGGCGTTGGGACGGGGCTTTTCCACCAAGAATCCGGTGTACA 8522
||| ||||||| |||||||| | ||||| |||||||| |||| || | | ||||
Sbjct 187170 CCATGGTCTCACCAAAGATGGCATCTGGACGAGGCTTTTCTACCAGGAGGGCTGGATACA 187229
Query 8523 GCTCCACAGCCTCGACGTCTCCGTAAAGGGCCCTGAGTTCGGCAGCGATCTCCTTTTCTC 8582
|||||| || |||| ||||| ||||||||| | | ||||| || ||||| ||||
Sbjct 187230 GCTCCATGGCATCGATATCTCCATAAAGGGCCTCTAACCCTGCAGCCATTTCCTTCTCTC 187289
Query 8583 CT 8584
||
Sbjct 187290 CT 187291
Score = 131 bits (144), Expect = 2e-25
Identities = 150/202 (74%), Gaps = 0/202 (0%)
Strand=Plus/Plus
Query 9649 TCTTACCCCATGTCCCAGTCCTTTAGTGAAGGCCGGGCCTCGCGCCAAATCAGTCCTAAA 9708
|||||||||||| ||||||||||| ||||| | || |||||| ||| ||| | ||
Sbjct 189602 TCTTACCCCATGGCCCAGTCCTTTGGTGAAACCTGGCCCTCGCTTATGATCTGTCTTGAA 189661
Query 9709 AAACTGGTGCGTGAAATGTTGGCCAAAAAAGGCAAACATTAAGTTGGTGCCCTGGGGATC 9768
||| || || ||||| || ||| ||||||| |||||||| | || ||||||||||||||
Sbjct 189662 AAATTGATGGGTGAAGTGCTGGGCAAAAAATGCAAACATCATATTTGTGCCCTGGGGATC 189721
Query 9769 GGGAGTGAAGGTCCTCCGAAGAAGAGTTTTTTCCACAACGTGTGCCGCATCCGGCAGCTT 9828
||| |||| | || | |||||| ||||||||||| | | | ||| || ||||
Sbjct 189722 AGGAATGAACTTTCTTCTTAGAAGAAATTTTTCCACAATCTCTTTAGAATCAGGAAGCTC 189781
Query 9829 TGTTTTACCTGGTGAACGAGAA 9850
| | || |||| || |||||
Sbjct 189782 TTTCTTGCCTGAAAAATGAGAA 189803
Score = 91.5 bits (100), Expect = 2e-13
Identities = 202/298 (68%), Gaps = 4/298 (1%)
Strand=Plus/Plus
Query 8944 CTTACTCGGCCGGCTATTTGTTTCGTGAACGATTCTACTAGCTGGGTAATGCCGTGAGTC 9003
||||| | ||| || ||||| | |||| ||||| || | |||||||| || || |
Sbjct 187995 CTTACCCTGCCAGCAATTTGCCTGCTGAAGGATTCCACAAACTGGGTAAGCCCATGTTCC 188054
Query 9004 ATGAGTATGGAATTGTTGTAGACGAAGTTAACGTAGTCATACTTTGTTTTATCAATCTCA 9063
| ||||| || ||||||||||| || | | | | |||| | ||| || |
Sbjct 188055 AGCAGTATAGAGTTGTTGTAGACAAACTGTTGGAAATTGTACTCCTGGTCATCTATTTGC 188114
Query 9064 AATGCATCCGGCATGAGAGAATGCCAGTGATACAACATGTTAAACTCGGAAAATATACGA 9123
|| | || |||| || | ||||||||| || | | |||||||||| | | |||||
Sbjct 188115 AAAGTGTCAGGCAGAAGGGGATGCCAGTGGTAGAGCGTGTTAAACTCAGCAGCAATACGG 188174
Query 9124 TTTTGGTACTGGAA-CGAAGTACCAAAGAGCAGTTCGGGCTTAAACAGCAGCTGAAAATG 9182
|||||||||||||| | | ||| ||||| || || | |||| ||||| || ||
Sbjct 188175 TTTTGGTACTGGAATTGTTGGTTGAAA-AGCAGCTCTGGGTCAAACTTCAGCTTGAAGTG 188233
Query 9183 GTAGCCGCTGAGCTGCTGAACGTATTGCGTC-ACGATAATGTTGATGGTTTCCCCGAT 9239
||||| || | ||||| || || | | || | | ||| || |||||||| || ||
Sbjct 188234 ATAGCCACTCAAGTGCTGTACATAGT-CTTCAATCACAATCTTAATGGTTTCTCCTAT 188290
>seq218
Length=3091361
Score = 129 bits (142), Expect = 8e-25
Identities = 170/236 (72%), Gaps = 0/236 (0%)
Strand=Plus/Plus
Query 8349 TCTTGACGATCCCGAACCCCACGTCTCCGCCGAAGGTGCTGGGCTTCCAGTACCCCGGGG 8408
||||||| || ||| |||| || || || |||||||| |||||||||||| | || |
Sbjct 70553 TCTTGACCATATTGAAGCCCATCTCACCACCAAAGGTGCTCGGCTTCCAGTACTCTGGAG 70612
Query 8409 AGCAGATGACGTTCGCCATGAGGCCTTTGAGGGAGAACGGAGCCCCCAACTCGAGAATGC 8468
|||||||| ||| | | |||||| |||||||| || |||||||| | || | || |
Sbjct 70613 AGCAGATGGGATTCCCTAGGAGGCCCTTGAGGGAAAAGGGAGCCCCAATTTCTATCATAC 70672
Query 8469 TCTCACCGAAGATGGCGTTGGGACGGGGCTTTTCCACCAAGAATCCGGTGTACAGCTCCA 8528
|||| || ||||||| ||||||| || ||| |||| | | || | ||| | |||||
Sbjct 70673 TCTCCCCAAAGATGGAGTTGGGATGGCACTTCTCCAGAAGCAGCCCTGGGTAGAACTCCA 70732
Query 8529 CAGCCTCGACGTCTCCGTAAAGGGCCCTGAGTTCGGCAGCGATCTCCTTTTCTCCT 8584
|| |||| |||||| || || || | || || || |||||| | || |||
Sbjct 70733 AGGCATCGATGTCTCCATACAGCTCCTCCAACTCTGCTGCAATCTCCGTCTCCCCT 70788
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 716807056848320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |