Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mustela_20putorius_20furo_20[refseq_20GCF_5F000215625.1_202011-06- 02] 7,783 sequences; 2,410,879,678 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq39 138 1e-27 seq323 122 8e-23 seq65 118 1e-21 seq237 116 3e-21 seq101 114 1e-20 seq161 111 1e-19 seq50 98.7 9e-16 >seq39 Length=13401118 Score = 138 bits (152), Expect = 1e-27 Identities = 156/209 (75%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 41654 ACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCG 41713 ||||| ||||| || ||||||||| ||||| |||||||| ||||||||| | || || Sbjct 1513492 ACCAGGTGCAGAGTCGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGCCCATCCTCC 1513433 Query 41714 AGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATG 41773 ||||| || || || || |||| | ||| ||||| | ||| | || |||||||||| | Sbjct 1513432 AGCTGTTTCCCAGCAAAGATCAACCTCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGG 1513373 Query 41774 ATTTTTTGCTTCAACGACGACACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTA 41833 || || ||| | | | ||||| || | ||||||||||| || || || ||| Sbjct 1513372 ATCTTCGCCTTGACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTA 1513313 Query 41834 CCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 |||||||| ||||| ||||| |||||||| Sbjct 1513312 CCCGTCAGGGTCTTCACGAAGATCTGCAT 1513284 >seq323 Length=1159590 Score = 122 bits (134), Expect = 8e-23 Identities = 154/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 41654 ACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCG 41713 ||||| ||||| ||| ||| ||||| ||||| || || || || ||||| | || || Sbjct 303411 ACCAGGTGCAGAGTGGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCTTCC 303470 Query 41714 AGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATG 41773 ||||||||||| || || || || | ||| ||||| | ||| | || |||||| || | Sbjct 303471 AGCTGCTTGCCAGCAAAGATAAGCCTCTGCTGGTCGGGGGGGATGCCCTCCTTATCTTGG 303530 Query 41774 ATTTTTTGCTTCAACGACGACACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTA 41833 || || ||||| | | ||||| || | ||||||||||| || || || || Sbjct 303531 ATCTTGGCCTTCACATTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTG 303590 Query 41834 CCCGTCAGCGTCTTTACGAAAATCTGCATGTT 41865 || ||||| ||||| |||||||||||||| || Sbjct 303591 CCGGTCAGGGTCTTCACGAAAATCTGCATTTT 303622 >seq65 Length=10028950 Score = 118 bits (130), Expect = 1e-21 Identities = 152/210 (72%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 41654 ACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCG 41713 ||||||||||| ||| ||| ||||| ||||| || || || || ||||| | || ||| Sbjct 4318164 ACCAGATGCAGGGTGGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCTTCG 4318105 Query 41714 AGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATG 41773 ||||||||||| || || || || | ||| ||||| | ||| | || || ||||| | Sbjct 4318104 AGCTGCTTGCCAGCAAAGATAAGCCTCTGCTGGTCAGGGGGGATGCCTTCTTTGTCTTGG 4318045 Query 41774 ATTTTTTGCTTCAACGACGACACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTA 41833 || || | ||| | | ||||| || | ||||||||||| || || || || Sbjct 4318044 ATCTTGTCCTTTACATTTTCAATGGTGTCACTGGGCTCCACCTCCAGAGTGATGGTCTTG 4317985 Query 41834 CCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 || ||||| ||||| ||||| ||||||||| Sbjct 4317984 CCGGTCAGGGTCTTCACGAAGATCTGCATG 4317955 Score = 100 bits (110), Expect = 3e-16 Identities = 148/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 41654 ACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCG 41713 ||||| || || || ||| ||||| ||||| || || || || ||||| | || || Sbjct 4318392 ACCAGGTGGAGAGTTGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCTTCT 4318333 Query 41714 AGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATG 41773 ||||||||||| || || || || | ||| ||||| | ||| | || |||||| || | Sbjct 4318332 AGCTGCTTGCCTGCAAAGATAAGCCTCTGCTGGTCAGGGGGGATGCCCTCCTTATCTTGG 4318273 Query 41774 ATTTTTTGCTTCAACGACGACACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTA 41833 || || ||| | | ||||| || | ||||||||||| || || || || Sbjct 4318272 ATCTTGGCCTTTACATTTTCAATGGTGTCACTAGGCTCCACCTCCAGGGTGATGGTCTTG 4318213 Query 41834 CCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 || ||||| ||||| ||||| ||||||||| Sbjct 4318212 CCAGTCAGGGTCTTCACGAAGATCTGCATG 4318183 >seq237 Length=2526385 Score = 116 bits (128), Expect = 3e-21 Identities = 148/201 (74%), Gaps = 2/201 (1%) Strand=Plus/Plus Query 41654 ACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCG 41713 ||||| || || ||| ||||||||| ||||| |||||||| ||||||||| | || || Sbjct 2103817 ACCAGGTGAAGAGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGCCCATCCTCC 2103876 Query 41714 AGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATG 41773 ||||| || ||||| || |||| | ||| ||||| | ||| | || ||| || || || Sbjct 2103877 AGCTGTTTCCCGGCAAAGATCAACCTCTGCTGGTCAGGGGGGATGCCCTCTTTCTCT-TG 2103935 Query 41774 ATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTT 41832 | | || ||| || | | ||||| || | ||||||||||| || || || || Sbjct 2103936 AATCTTCCCTTTCACATTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTT 2103995 Query 41833 ACCCGTCAGCGTCTTTACGAA 41853 ||||||||| ||||| ||||| Sbjct 2103996 ACCCGTCAGGGTCTTCACGAA 2104016 >seq101 Length=7325712 Score = 114 bits (126), Expect = 1e-20 Identities = 153/212 (72%), Gaps = 3/212 (1%) Strand=Plus/Plus Query 41654 ACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCG 41713 ||||| ||||| ||| ||| ||||| ||||| || || || || ||||| | || || Sbjct 127815 ACCAGGTGCAGAGTGGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCTTCC 127874 Query 41714 AGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATG 41773 ||||||||||| || || || || | ||| ||||| | ||| | || ||| ||||| | Sbjct 127875 AGCTGCTTGCCAGCAAAGATAAGCCTCTGCTGGTCGGGGGGGATGCCCTCTTTGTCTTGG 127934 Query 41774 ATTTTTTGCTTCAACGACGACACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTA 41833 || || ||||| | | ||||| || ||||||||||| || || || || Sbjct 127935 ATCTTGGCCTTCA---CATTCTCGGTGTCACTGAGCTCCACCTCCAGGGTGATGGTCTTG 127991 Query 41834 CCCGTCAGCGTCTTTACGAAAATCTGCATGTT 41865 || ||||| ||||| |||||||||||||| || Sbjct 127992 CCGGTCAGGGTCTTCACGAAAATCTGCATTTT 128023 Score = 113 bits (124), Expect = 4e-20 Identities = 153/211 (73%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 41654 ACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCG 41713 ||||||||||| ||| || ||||| ||||| || || || || ||||| | || || Sbjct 127587 ACCAGATGCAGAGTGGATTCGTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCTTCC 127646 Query 41714 AGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATG 41773 ||||||||||| || || || || | ||| ||||| | ||| | || |||||| | | || Sbjct 127647 AGCTGCTTGCCAGCAAAGATAAGCCTCTGCTGGTCAGGGGGGATGCCCTCCTTAT-CTTG 127705 Query 41774 ATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTT 41832 | || |||| || | | ||||| || | ||||||||||| || || || || Sbjct 127706 GATCTTGGCTTTCACATTTTCAATGGTGTCACTAGGCTCCACCTCCAGAGTGATGGTCTT 127765 Query 41833 ACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 || ||||| ||||| ||||| ||||||||| Sbjct 127766 GCCAGTCAGGGTCTTCACGAAGATCTGCATG 127796 >seq161 Length=5000004 Score = 111 bits (122), Expect = 1e-19 Identities = 167/235 (71%), Gaps = 2/235 (1%) Strand=Plus/Minus Query 41632 ACCGCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTC 41691 || ||| || | ||||| | ||||| || || || ||| ||||| ||||| || || Sbjct 410120 ACAGCCACCCCTCAGACGGAGAACCAGGTGGAGAGTTGACTCTTTCTGGATGTTGTAATC 410061 Query 41692 GGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGC 41751 || || ||||| | || || ||||||||||| || || || || | ||| ||||| | Sbjct 410060 AGAAAGAGTGCGGCCATCTTCTAGCTGCTTGCCAGCAAAGATAAGCCTCTGCTGGTCAGG 410001 Query 41752 GGGAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACT 41810 ||| | || |||||| | | || | || |||| || | | ||||| || | || Sbjct 410000 GGGGATGCCCTCCTTAT-CTTGGATCTTGGCTTTCACATTTTCGATGGTGTCACTGGGCT 409942 Query 41811 CCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATGTT 41865 ||||||||| || || || || || ||||| ||||| |||||||||||||| || Sbjct 409941 CCACCTCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAAATCTGCATTTT 409887 Score = 87.8 bits (96), Expect = 2e-12 Identities = 157/228 (69%), Gaps = 1/228 (0%) Strand=Plus/Minus Query 41632 ACCGCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTC 41691 || ||| || | ||||| | ||||| || || || ||| ||||| ||||| || || Sbjct 410347 ACAGCCACCCCTCAGACGGAGAACCAGGTGGAGAGTTGACTCTTTCTGGATGTTGTAATC 410288 Query 41692 GGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGC 41751 || || |||| | || || |||||||||||||| || || || | ||| |||| | | Sbjct 410287 AGAAAGAGTGCAGCCATCTTCTAGCTGCTTGCCGGCAAAGATAAGCCTCTGCTGGT-CAC 410229 Query 41752 GGGAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGACACAGTGTCGCTCGACTC 41811 ||| | || ||| || || ||| || ||| | | ||||| || | ||| Sbjct 410228 GGGGATGCCCTCTTTATCTTGGATCTTGGCCTTTACATTTTCAATGGTGTCACTGGGCTC 410169 Query 41812 CACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTG 41859 |||||||| || || || || || ||||| ||||| ||||| ||||| Sbjct 410168 CACCTCCAGAGTGATGGTCTTGCCAGTCAGGGTCTTCACGAAGATCTG 410121 >seq50 Length=12588045 Score = 98.7 bits (108), Expect = 9e-16 Identities = 149/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 41654 ACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCG 41713 ||||| ||||| ||| ||| ||||| ||||| || || || || ||| | | || || Sbjct 11770648 ACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGTGGCCATCTTCC 11770707 Query 41714 AGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATG 41773 |||||||||||||| || || || | ||| || || ||| | || ||| || || | Sbjct 11770708 AGCTGCTTGCCGGCAAAGATAAGCCTCTGCTGATCGTGGGGGATGCCCTCTTTATCTTGG 11770767 Query 41774 ATTTTTTGCTTCAACGACGACACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTA 41833 || || ||||| | | ||||| | | |||||||| || || || || || Sbjct 11770768 ATCTTGGCCTTCACATTCTCGATGGTGTCATTGGGCTCCACCTTCAAGGTGATGGTCTTG 11770827 Query 41834 CCCGTCAGCGTCTTTACGAAAATCTGCATGTT 41865 || ||||| ||||| |||||||||||||| || Sbjct 11770828 CCGGTCAGGGTCTTCACGAAAATCTGCATTTT 11770859 Score = 95.1 bits (104), Expect = 1e-14 Identities = 161/232 (69%), Gaps = 1/232 (0%) Strand=Plus/Plus Query 41632 ACCGCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTC 41691 || ||| || | ||||| | ||||| || || || ||| ||||| ||||| || || Sbjct 11770171 ACAGCCACCCCTCAGACGGAGAACCAGGTGGAGAGTTGACTCTTTCTGGATGTTGTAATC 11770230 Query 41692 GGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGC 41751 || || |||| | || || |||||||||||||| || || || | ||| |||| | | Sbjct 11770231 AGAAAGAGTGCAGCCATCTTCTAGCTGCTTGCCGGCAAAGATAAGCCTCTGCTGGT-CAC 11770289 Query 41752 GGGAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGACACAGTGTCGCTCGACTC 41811 ||| | || ||| || || ||| || ||| | | ||||| || | ||| Sbjct 11770290 GGGGATGCCCTCTTTATCTTGGATCTTGGCCTTTACATTTTCAATGGTGTCACTGGGCTC 11770349 Query 41812 CACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 |||||||| || || || || || ||||| ||||| ||||| ||||||||| Sbjct 11770350 CACCTCCAGAGTGATGGTCTTGCCAGTCAGGGTCTTCACGAAGATCTGCATG 11770401 Score = 84.2 bits (92), Expect = 2e-11 Identities = 146/211 (69%), Gaps = 1/211 (0%) Strand=Plus/Plus Query 41654 ACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCG 41713 || || ||||| ||| ||| ||||| ||||| || || || || ||| | | || || Sbjct 11770419 ACTAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGTGGCCATCTTCC 11770478 Query 41714 AGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTC-CGCGGGAACGCTCTCCTTGTCCAT 41772 ||||||||||| || || || || | ||| ||||| | ||| | || ||| || || Sbjct 11770479 AGCTGCTTGCCAGCAAAAATAAGCCTCTGCTGGTCAGGGGGGGATGCCCTCTTTATCTTG 11770538 Query 41773 GATTTTTTGCTTCAACGACGACACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTT 41832 ||| || ||||| | ||||| || | ||||||||||| || || || || Sbjct 11770539 GATCTTGGCCTTCACATTTTTGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTT 11770598 Query 41833 ACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 || ||||| ||||| | ||| ||||| ||| Sbjct 11770599 GCCAGTCAGGGTCTTCATGAAGATCTGTATG 11770629 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462259023599600