Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myotis_20davidii_20[refseq_20GCF_5F000327345.1_202012-12-20] 101,769 sequences; 2,059,799,708 total letters Query= NC_001348.1 Length=124884 Score E Sequences producing significant alignments: (Bits) Value seq18467 221 1e-52 >seq18467 Length=3096793 Score = 221 bits (244), Expect = 1e-52 Identities = 518/781 (66%), Gaps = 22/781 (3%) Strand=Plus/Minus Query 18579 TTTGGAATGCAAGCTCGATACAATTTGCGAAATGAATTTCCTCTTTTAACTACAAAGCGT 18638 || || ||||| || || |||| || || |||| |||||||| | || || |||| | Sbjct 1469267 TTCGGCATGCAGGCGCGCTACAGCCTGAGACATGAGTTTCCTCTGCTGACAACCAAGCAT 1469208 Query 18639 GTTTTTTGGAGGGCCGTCGTGGAAGAGTTGTTATGGTTTATCCGCGGGTCAACCGATTCC 18698 || || |||| || ||| ||| ||||| | ||||||||| || || || || | Sbjct 1469207 GTGTTCTGGAAGGGTGTCCTGGGGCAGTTGCTGTGGTTTATCAAGGGATCCACAAATGCT 1469148 Query 18699 AAAGAACTCGCCGCTAAAGATATACACATATGGGATATATACGGATCGAGCAAATTTCTA 18758 |||||||| | | || | || || ||||| | |||| ||| Sbjct 1469147 AAAGAACTGTCGTCCAAGGGAGTAAGAATCTGGGACGCCAATGGAT--AGCC-------- 1469098 Query 18759 AATAGGAATGGCTTCCATAAAAGACACACGGGGGACCTTGGCCCCATTTACGGCTTCCAG 18818 | ||| | | ||||||||| || | |||||| |||| ||||| ||| Sbjct 1469097 --TGGGATTCTCCAGCATAAAAGAA--------GATTTAGGCCCCGTTTATGGCTTTCAG 1469048 Query 18819 TGGAGACATTTTGGAGCGGAATATAAAGACTGTCAATCAAACTATTTACAGCAAGGAATC 18878 ||||| |||||||| || || || ||||| | ||| | |||| | |||||| Sbjct 1469047 TGGAGGCATTTTGGGGCAGACTACAAAGATATGGATTCAGATTATTCCGATCAAGGAGCA 1468988 Query 18879 GATCAGCTGCAAACTGTTATAGATACAATTAAAACAAACCCAGAAAGCCGACGAATGATT 18938 || | ||||||| || || | ||||| ||||| ||||| || | || |||| || Sbjct 1468987 GACCGACTGCAAAAGGTGATTGGCACAATCAAAACCAACCCTGACGACAGAAGAATCATC 1468928 Query 18939 ATATCGTCTTGGAATCCAAAGGATATCCCCTTAATGGTACTACCTCCATGTCACACGTTA 18998 | | ||||||||||||| ||| | || | ||||| || |||||||| || | | Sbjct 1468927 CTGTGTGCTTGGAATCCAAACGATCTTCCTTCAATGGCCCTGCCTCCATGCCATGCCCTC 1468868 Query 18999 TGTCAGTTTTACGTTGCAAACGGTGAATTATCCTGCCAAGTATACCAGAGATCGGGGGAT 19058 |||||||| ||||| | |||||||| | |||||||| | |||||||| || | || Sbjct 1468867 TGTCAGTTCTACGTGGTGAACGGTGACCTGTCCTGCCAGCTGTACCAGAGGTCAGCAGAC 1468808 Query 19059 ATGGGCCTTGGGGTACCGTTCAACATTGCTGGATATGCACTTCTTACCTACATAGTAGCG 19118 ||||| || || || || |||||||| || | || | || || |||||||| || || Sbjct 1468807 ATGGGGCTAGGTGTGCCCTTCAACATCGCCAGCTACACCCTGCTCACCTACATGGTCGCA 1468748 Query 19119 CATGTTACAGGACTTAAAACCGGAGATTTAATTCATACAATGGGGGATGCACATATTTAC 19178 || | || || || || | || || || | || || |||| |||||||| || ||| Sbjct 1468747 CACATCACCGGCCTGAAGCCAGGTGACTTCCTGCACACTTTGGGAGATGCACACATCTAC 1468688 Query 19179 TTGAATCATATAGATGCTTTAAAAGTGCAGCTAGCTCGATCCCCAAAACCTTTTCCTTGC 19238 |||||||| | || | | ||| ||||||| ||| || || ||||| || Sbjct 1468687 TTGAATCACGTTGAGCCGCTGAAAATGCAGCTTCAACGAGAACCGAAGCCTTTCCCGAAG 1468628 Query 19239 CTTAAAATTATTCGAAATGTAACAGA-TATAAACGACTTTAAATGGGACGATTTTCAGCT 19297 || ||||| || |||| || ||| || | ||||| || || || |||||| | Sbjct 1468627 CTCAAAATCCTTTGAAAAGT-TGAGACAATCGATGACTTCAAGACTGAAGACTTTCAGAT 1468569 Query 19298 TGATGGATATAATCCACAccccccccTAAAAATGGAAATGGCTCTTTAATGGATTTTTAA 19357 ||| || || ||||| || || | | ||| |||||| ||| ||||| | |||||| Sbjct 1468568 TGAGGGGTACAATCCTCATCCGACTATTAAAGTGGAAACGGCCGTTTAAAGTGCTTTTAA 1468509 Query 19358 A 19358 | Sbjct 1468508 A 1468508 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399008491318605