Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myotis_20davidii_20[refseq_20GCF_5F000327345.1_202012-12-20] 101,769 sequences; 2,059,799,708 total letters Query= NC_001350.1 Length=112930 Score E Sequences producing significant alignments: (Bits) Value seq14731 338 5e-88 seq18467 165 6e-36 seq11084 141 7e-29 seq18455 116 3e-21 >seq14731 Length=214786 Score = 338 bits (374), Expect = 5e-88 Identities = 424/581 (73%), Gaps = 33/581 (6%) Strand=Plus/Plus Query 3955 AAAAGACATTTGTATTAATGATTCTTCTCATATACTTCAAATTTGTACTTAATACTTTTC 4014 |||| || || |||| | |||||| ||| |||||||| ||||||||||||| | ||| Sbjct 14698 AAAACACCTTCACATTATTCATTCTTTTCACATACTTCATATTTGTACTTAATGCCTTTT 14757 Query 4015 TCTTCTTGCACATTAGAAAGAACACTTGGATATTCTATCAAAAGTTTGTATTTCTCTAGA 4074 || || || |||| ||||||||||| |||| | ||| | ||||||||||||||| | | Sbjct 14758 TCCTCCTGGACATCAGAAAGAACACCTGGAAACTCTGGGAGAAGTTTGTATTTCTCCAAA 14817 Query 4075 TCAAATTCTGGAAAAAAGGTGTCACATTCAAAGTCTTGCATGATCCTAGTCACAAACAGT 4134 |||| |||||||||||| | || | || ||||||||||| ||| ||| | | Sbjct 14818 TCAATTTCTGGAAAAAAA-----AAATGTA---TCCTGCATGATCCTTATCAAAAAGAAT 14869 Query 4135 TTAAGATCGCATGGATAACTCATAGCTTCTTTATACACAGAACTACCTCCAATTATCCAG 4194 || || || | | |||| ||||| ||||| ||| |||| ||||| | |||||| Sbjct 14870 CTATAATGGCCAAGCTTGTTCATGGCTTCCTTATAAACAAAACTTCCTCCCACTATCCAA 14929 Query 4195 ACCATGTCTACTTTATTTGCTAATTCTGGCTGTTCGGTAAGTTTTAAAGCATCATCTAAA 4254 ||||||| |||||||||| ||||||||| | || |||||||||| |||||||| | Sbjct 14930 GCCATGTCCACTTTATTTGTTAATTCTGGTTCCTCAATAAGTTTTAAGGCATCATCCTGA 14989 Query 4255 CTCTTAGCTAAAAAATGAGCTCTATGTGGAAGCTCCTTT---AGTTCCTTGCTGAGAACA 4311 || || || |||||| ||| ||||||||| || | || |||||| | Sbjct 14990 CTTTTGGCAAAAAAA--------ATG----AGCTCCTTTCAGAGGTTCTA-CTGAGATCT 15036 Query 4312 ACATTAATTCTGCCTTTTAAAGGCCGGTTCTTCTCAGGAATTGAGAACCAAGTCTTTTTA 4371 | |||||| ||| | |||||||||| | |||||||||||| |||||||| ||||| || Sbjct 15037 AAATTAATCCTGTCCTTTAAAGGCCAATACTTCTCAGGAATGGAGAACCAGGTCTTCCTA 15096 Query 4372 CCCATAATCACTAAATTCTGTTTATCTGGTACAGAAGATGTAGTAGTCATTCTTTGGAAA 4431 |||| ||||||||||| || | | ||||| || || ||||||||||||||| Sbjct 15097 CCCA---------AATTCTGTTTACCTTCTGCTGAAGAGGTTGTGGTCATTCTTTGGAAA 15147 Query 4432 TGTTTAAAATCATTCATAAGTCTTGGCCAAGGCAAGTTACCTTGTTTGCCAATGCCCATG 4491 | || || ||||| | ||| | |||||||| || || | |||| ||||||||| Sbjct 15148 TACTTGAATTCATTTCTGAGTGGGGACCAAGGCAGGTCTCCATTCTTGCTGATGCCCATG 15207 Query 4492 TTTTGAGCTACAGCAACAATGCAGTTTAGTGCTTGAACCAT 4532 || || | ||||||| ||| ||||||| | |||||||| Sbjct 15208 TTCTGGGACACAGCAATGATGTAGTTTAGGGGATGAACCAT 15248 >seq18467 Length=3096793 Score = 165 bits (182), Expect = 6e-36 Identities = 292/423 (69%), Gaps = 2/423 (0%) Strand=Plus/Plus Query 101671 CTGCATTTTAAGAGCATCAATGTGATCTACATAGATGTGAGCATCTCCTATAGTATGGAT 101730 ||||||||| || | |||| ||||| | |||||||| |||||||| | ||| || | Sbjct 1468658 CTGCATTTTCAGCGGCTCAACGTGATTCAAGTAGATGTGTGCATCTCCCAAAGTGTGCAG 1468717 Query 101731 AAACTCTCCAGGCACTAGATTAGTGACATGAGCAATCATGCAAGTTAAAAGAGAATAGCT 101790 || || || ||| || |||| || || | |||| | || | || | ||||| Sbjct 1468718 GAAGTCACCTGGCTTCAGGCCGGTGATGTGTGCGACCATGTAGGTGAGCAGGGTGTAGCT 1468777 Query 101791 AGCAATGTTAAATGGCACTCCTAACCCCATATCAGCTGATCTTTGATACAGTTGACAGGA 101850 || ||||| || ||||| |||| |||||| || ||||| || || ||||| || ||||| Sbjct 1468778 GGCGATGTTGAAGGGCACACCTAGCCCCATGTCTGCTGACCTCTGGTACAGCTGGCAGGA 1468837 Query 101851 AAGCTTTCCAT-CACAGACATAAAATTGACTTAATACATGACAAGGCGGCAACACCATTT 101909 || | || | ||| || || || |||| | |||| || || |||| ||||| Sbjct 1468838 CAGGTCACCGTTCACC-ACGTAGAACTGACAGAGGGCATGGCATGGAGGCAGGGCCATTG 1468896 Query 101910 TAGGAATGTCTGAAACATTCCAAGCACACATTAACATCCTTCTATCTGTAGGGTTTGTTT 101969 ||||| || |||||||||||||| | || ||||| || |||||| |||| Sbjct 1468897 AAGGAAGATCGTTTGGATTCCAAGCACACAGGATGATTCTTCTGTCGTCAGGGTTGGTTT 1468956 Query 101970 TTATAGTATCAATCAACTGTTTTAATTGGTCAACTCCTTCTCCTTTATAATCGCGCCCAA 102029 | || || |||||| || || | | |||| |||||| | |||||| | | Sbjct 1468957 TGATTGTGCCAATCACCTTTTGCAGTCGGTCTGCTCCTTGATCGGAATAATCTGAATCCA 1469016 Query 102030 CACCTTTATATTCTGCTCCGAAATGCCTCCACTGAAATCCATACACAGGTCCAAGATCTC 102089 | |||| || ||||| || ||||||||||||||||| ||||| || || || | |||| Sbjct 1469017 TATCTTTGTAGTCTGCCCCAAAATGCCTCCACTGAAAGCCATAAACGGGGCCTAAATCTT 1469076 Query 102090 CTT 102092 ||| Sbjct 1469077 CTT 1469079 >seq11084 Length=3632028 Score = 141 bits (156), Expect = 7e-29 Identities = 164/221 (74%), Gaps = 0/221 (0%) Strand=Plus/Plus Query 26952 ACAATGGGAGTAACGCATGTGCAGCCTACAGTCACTAGCATCTTCTCTAGCCTAAATGAA 27011 |||||||| || || || |||||||| ||||| || | |||||||| |||| || || Sbjct 430407 ACAATGGGGGTGACACAGGTGCAGCCCACAGTGACGAATATCTTCTCCAGCCGGAAGGAG 430466 Query 27012 TTAGGGCAGGGTTGATGCCCTTTGCGCACCACTAGAATCTCTTGTTGGATAGGGACTGAG 27071 | | |||| | || || | |||||| || || ||||| || | || ||||| ||| Sbjct 430467 TGGGAGCAGCGCCGAGGCTCCCTGCGCAAGACCAGGATCTCCTGCTTTATGGGGACGGAG 430526 Query 27072 TTCATGTGGTAGTCTACATTCCCATCAGCATTAACACATCCTAAGTAGCGACACTTTGCT 27131 |||| ||||| ||| | ||||| |||| ||| || || |||| ||| ||||| || Sbjct 430527 TTCAGGTGGTGGTCCATCTTCCCTTCAGGATTGACGCAGAACAAGTGGCGGCACTTGGCC 430586 Query 27132 TCCCAAATCACAGAGGGATATCTATCTTGATCTTCATTGCG 27172 ||||| ||||||||||||||||| || | || |||||||| Sbjct 430587 TCCCAGATCACAGAGGGATATCTCTCAGGGTCCTCATTGCG 430627 >seq18455 Length=17742090 Score = 116 bits (128), Expect = 3e-21 Identities = 91/109 (83%), Gaps = 0/109 (0%) Strand=Plus/Plus Query 4290 CTTTAGTTCCTTGCTGAGAACAACATTAATTCTGCCTTTTAAAGGCCGGTTCTTCTCAGG 4349 ||| ||||| | |||||||| | |||||| ||| | ||||||||||| ||||||| || Sbjct 6154910 CTTGAGTTCTCTACTGAGAACTAAATTAATCCTGTCCTTTAAAGGCCGATTCTTCTTGGG 6154969 Query 4350 AATTGAGAACCAAGTCTTTTTACCCATAATCACTAAATTCTGTTTATCT 4398 ||| |||||||| ||||| ||||||||||||| |||||||||||| || Sbjct 6154970 AATGGAGAACCAGGTCTTCCTACCCATAATCACCAAATTCTGTTTACCT 6155018 Score = 109 bits (120), Expect = 4e-19 Identities = 96/120 (80%), Gaps = 0/120 (0%) Strand=Plus/Plus Query 4165 TTATACACAGAACTACCTCCAATTATCCAGACCATGTCTACTTTATTTGCTAATTCTGGC 4224 ||||| || ||||| ||||| | |||||| ||||| || |||||||||| ||||||||| Sbjct 6151806 TTATAAACGGAACTGCCTCCTACTATCCAAACCATATCCACTTTATTTGTTAATTCTGGT 6151865 Query 4225 TGTTCGGTAAGTTTTAAAGCATCATCTAAACTCTTAGCTAAAAAATGAGCTCTATGTGGA 4284 | || |||||||||| |||||||| | ||| || || | ||||||||||| | |||| Sbjct 6151866 TCCTCAATAAGTTTTAAGGCATCATCCAGACTTTTGGCAAGAAAATGAGCTCCTTTTGGA 6151925 Score = 93.3 bits (102), Expect = 3e-14 Identities = 87/111 (78%), Gaps = 0/111 (0%) Strand=Plus/Plus Query 4056 AAGTTTGTATTTCTCTAGATCAAATTCTGGAAAAAAGGTGTCACATTCAAAGTCTTGCAT 4115 |||||| |||||||| | ||||| |||||| ||||| || |||| |||||| || ||||| Sbjct 6146752 AAGTTTATATTTCTCCAAATCAATTTCTGGGAAAAATGTATCACTTTCAAATTCCTGCAT 6146811 Query 4116 GATCCTAGTCACAAACAGTTTAAGATCGCATGGATAACTCATAGCTTCTTT 4166 |||||| |||||||| ||| ||| || || | ||||| ||||| || Sbjct 6146812 GATCCTTGTCACAAAGAGTCGTTGATGGCCGGGCTTGCTCATGGCTTCCTT 6146862 Score = 89.7 bits (98), Expect = 4e-13 Identities = 67/79 (85%), Gaps = 0/79 (0%) Strand=Plus/Plus Query 3968 ATTAATGATTCTTCTCATATACTTCAAATTTGTACTTAATACTTTTCTCTTCTTGCACAT 4027 |||| | |||||| |||||||||||||||||||||||||| | ||| || || || |||| Sbjct 6143693 ATTACTCATTCTTTTCATATACTTCAAATTTGTACTTAATGCCTTTTTCCTCCTGGACAT 6143752 Query 4028 TAGAAAGAACACTTGGATA 4046 ||||||||||| ||| || Sbjct 6143753 CAGAAAGAACACCTGGGTA 6143771 Score = 82.4 bits (90), Expect = 6e-11 Identities = 113/157 (72%), Gaps = 2/157 (1%) Strand=Plus/Minus Query 4378 ATCACT--AAATTCTGTTTATCTGGTACAGAAGATGTAGTAGTCATTCTTTGGAAATGTT 4435 |||||| ||| || ||| || | ||||||| || || |||||||||||||||| | Sbjct 12355800 ATCACTTAAAAATCCCGTTACCTTTTGCAGAAGAGGTTGTGGTCATTCTTTGGAAATACT 12355741 Query 4436 TAAAATCATTCATAAGTCTTGGCCAAGGCAAGTTACCTTGTTTGCCAATGCCCATGTTTT 4495 | || | |||| | || | |||||||| || || | ||||| ||||||||||| | Sbjct 12355740 TGAATTTATTCCTGAGCGGGGCCCAAGGCAGGTCTCCGTTCTTGCCGATGCCCATGTTCT 12355681 Query 4496 GAGCTACAGCAACAATGCAGTTTAGTGCTTGAACCAT 4532 | | ||||| | |||||||| || | ||||||| Sbjct 12355680 GGGACACAGCGGCGATGCAGTTGAGAGTACGAACCAT 12355644 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 360803136637019