Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myotis_20davidii_20[refseq_20GCF_5F000327345.1_202012-12-20] 101,769 sequences; 2,059,799,708 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq18467 253 2e-62 seq6654 212 7e-50 seq8166 178 2e-39 seq3078 150 2e-31 >seq18467 Length=3096793 Score = 253 bits (280), Expect = 2e-62 Identities = 511/755 (68%), Gaps = 26/755 (3%) Strand=Plus/Plus Query 145567 TGGGGGTGGTAGCCCTCCAGCGCAAAGTCCTCCGCCCTGAAGTCATCTATGTCCTCCACC 145626 || || | ||| ||||| | | |||||| || | | |||||||||| || ||| || Sbjct 1468551 TGAGGATTGTACCCCTCAATCTGAAAGTCTTCAGTCTTGAAGTCATCGATTGTCTCAACT 1468610 Query 145627 CGCCTCAGGATCCTGAGCCT-GGGAAAGGGCCGGGGGCTCCTGGTCAGCTGGAGCTTCAG 145685 | ||||| ||||| | |||||||| || ||| | | ||||| | ||||| Sbjct 1468611 TTTCAAAGGATTTTGAGCTTCGGGAAAGGCTTCGGTTCTCGTTGA-AGCTGCATTTTCAG 1468669 Query 145686 GGGCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGACGTGGATGAAGTCCCCGGG 145745 ||||| ||||| || | ||||| ||| || || |||| ||| | |||||| || || Sbjct 1468670 CGGCTCAACGTGATTCAAGTAGATGTGTGCATCTCCCAAAGTGTGCAGGAAGTCACCTGG 1468729 Query 145746 CTCGAGGCCCGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGTAGCTGGCTATGTTGAA 145805 || ||||| |||| ||| |||||||||||||| ||||||| ||||||||| |||||||| Sbjct 1468730 CTTCAGGCCGGTGATGTGTGCGACCATGTAGGTGAGCAGGGTGTAGCTGGCGATGTTGAA 1468789 Query 145806 GGGCACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCAGGAGAGCTCCCCGCC 145865 |||||| || ||||||||||| | || | |||||||||||||||||| || || ||| Sbjct 1468790 GGGCACACCTAGCCCCATGTCTGCTGACCTCTGGTACAGCTGGCAGGACAGGTCACCGTT 1468849 Query 145866 CGCCACGTAGAACTGGCACAGGAGGTGGCAGGGCGGCAGGGCCATGGCGGGCAGGTCCGC 145925 | ||||||||||||| || ||| ||||| || ||||||||||| | || || || Sbjct 1468850 CACCACGTAGAACTGACAGAGGGCATGGCATGGAGGCAGGGCCATTGAAGGAAGATCGTT 1468909 Query 145926 CGGGTTCCAGGCGGTGAGGACGAGCCTCCTGCTCTCGGGGTTCCTCTTGATCTCCCCTAT 145985 || ||||| || |||| || || ||| || ||||| | ||||| || || Sbjct 1468910 TGGATTCCAAGCACACAGGATGATTCTTCTGTCGTCAGGGTTGGTTTTGATTGTGCCAAT 1468969 Query 145986 CAGGTCCCTGAGCTGGTCCACGCCCTGCCCCCGGTAATCTGTCTTGGAGTCCACGTACGC 146045 || | || |||| | || || | ||||||| | || ||| | Sbjct 1468970 CACCTTTTGCAGTCGGTCTGCTCCTTGATCGGAATAATCTGAATCCATATCTTTGTAGTC 1469029 Query 146046 GGCCCCGAAGTGCCTCCACTGGAACCCGTAGACGGGCCCCAGGTCCCCGGGCTCCCTGTG 146105 ||||| || ||||||||||| || || || ||||| || | | || | | | Sbjct 1469030 TGCCCCAAAATGCCTCCACTGAAAGCCATAAACGGGGCCTAAAT-------CTTCTTTT- 1469081 Query 146106 CCCCAGCCCGGCCCGGGCGAGGAAGTCCCGGG--ACCCGTTGGCGTCCCAGATCTTGACG 146163 | | | ||| | |||| || | || |||||||||||||| | || Sbjct 1469082 ----ATGCTG--------GAG--AATCCCAGGCTATCCATTGGCGTCCCAGATTCTTACT 1469127 Query 146164 CCCCTCGCGGAGAGCTCATTGGAGTCCGTGGACCCCCTGATGAACCAGAGCAGCTCTTCG 146223 ||| | | || || || || | | ||||| ||| |||| ||||| |||| || | Sbjct 1469128 CCCTTGGACGACAGTTCTTTAGCATTTGTGGATCCCTTGATAAACCACAGCAACTGCCCC 1469187 Query 146224 AGGACCCCCCTCCAGAAGACCCTCTTGGTGGTCAGCAGGGGGAACTGGCCCCGCAGGGAG 146283 ||||| ||| ||||||| || |||||| |||||||| || |||| | |||| | Sbjct 1469188 AGGACACCCTTCCAGAACACATGCTTGGTTGTCAGCAGAGGAAACTCATGTCTCAGGCTG 1469247 Query 146284 TACTTGGCCTGGTCCCCGAAGACGGACAGGGTGCC 146318 || ||||| ||||| || ||||||||||| Sbjct 1469248 TAGCGCGCCTGCATGCCGAACACCGACAGGGTGCC 1469282 >seq6654 Length=5182431 Score = 212 bits (234), Expect = 7e-50 Identities = 509/760 (67%), Gaps = 15/760 (2%) Strand=Plus/Minus Query 176448 CTCACTAACATGTTACTGTTAAACTTGGCAATATCTGACTTGCTATTTCTTTTAACTTTG 176507 || || ||||| | ||| | ||| |||| || | |||||||| || || || || || Sbjct 4678750 CTGACCAACATCTACCTGCTCAACCTGGCCATCTGCGACTTGCTCTTCCTCTTCACGCTG 4678691 Query 176508 CCATTTTGGATGCACTATATTGGAATGTATCATGATTGGACTTTTGGTATTTCCCTGTGT 176567 || || ||||| |||||| | ||| || |||| ||| |||||| | |||| Sbjct 4678690 CCCTTCTGGATCCACTATCT--GAA-GTGGAATGAGTGGGTTTTTGGCCACTGTATGTGC 4678634 Query 176568 AAACTGCTCAGGGGTGTGTGTTACATGTCACTGTACAGCCAGGTCTTTTGCATCATCCTG 176627 || ||||| || | | | ||| ||||| | || |||||| |||||||||| Sbjct 4678633 AAGTTGCTCTCAGGGCTTTACTGCATCGGCTTGTACGGGGAGATCTTTTTCATCATCCTG 4678574 Query 176628 CTAACAGTAGACAGGTATCTAGCTGTTGTCTATGCTGTAACTGCTTTGAGGTTTAGAACA 176687 || || ||||| ||||||| || | ||| |||| || ||| || | | || Sbjct 4678573 CTGACCTTAGACCGGTATCTGGCCATCGTCCATGCCGTGTTTGCCCTGCGAACCCGGACT 4678514 Query 176688 GTAACCTGTGGCATAGTTACCTGTGTATGTACCTGGTTTCTGGCAGGGTTGTTGTCCCTC 176747 || || |||||| | | | |||| || ||| ||||| ||| || || ||||| Sbjct 4678513 GTCACTATTGGCATCATAAGCAGTGTCATCACGTGGGCCCTGGCGGGGCTGGTGGCCCTC 4678454 Query 176748 CCTGAATTTTTCTTTCATGGACACCAAGATGACAATGGTAGG--GTTCAGTGTGATCCTT 176805 ||||||||| |||| ||| ||| || | || | | |||| || | ||| | Sbjct 4678453 CCTGAATTTATCTTCCATAAGGCCCAGGAGCAGTCCGGAATGCTGTTCTGTA-GTTCCCT 4678395 Query 176806 ACTACCCAGAGATGTCTACAA--ATGTTTGGAGGCGCGCCCACGTTGCAAAGGTGATTAT 176863 ||||| ||| | | | | | | |||| || | | | | | | ||| | Sbjct 4678394 G-TACCCCGAG--GACGAGGAGGACGCCTGGAAGCATTTCTATGCCGTGAGGATGAACCT 4678338 Query 176864 GTTAAGTCTCATTTTGCCTCTGCTCATTATGGCTGTCTGCTACTATGTAATTATCAGAAG 176923 || || || | |||| ||||||||||||| |||||||||| | ||| |||| | Sbjct 4678337 CTTGAGCCTGGCTCTGCCCCTGCTCATTATGGTGGTCTGCTACTCCGGAATCATCAAGAC 4678278 Query 176924 ACTGTTGAGGCGCCCCAGCAAGAAGAAGTACAAGGCCATCAGGCTCATCTTTGTCATCAT 176983 ||| |||| | ||||||| ||| ||| ||||||||||| ||||||| ||| ||||||| Sbjct 4678277 GCTGATGAGATGTCCCAGCAGGAAAAAGCACAAGGCCATCCGGCTCATATTTATCATCAT 4678218 Query 176984 GGTGGCCTATTTTGTTTTTTGGACACCCTACAACATTGTTCTCCTACTGTCTACCTTTCA 177043 ||||| || ||| |||| ||| | ||||||||| | || |||| || ||| | ||||| Sbjct 4678217 GGTGGTCTTTTTCATTTTCTGGGCCCCCTACAACCTGGTGGTCCTTCTCTCTGCTTTTCA 4678158 Query 177044 CGCAACCCTTCTTAAC--CTGCAGTGTGCATTGAGCAGTAACTTGGACATGGCTCTGCTG 177101 | | | | || || | || | |||| ||||| | ||||| |||| ||| | Sbjct 4678157 AGAGATCTTCTTTGACATCAGCTGCGTGC--GGAGCAACCAGCTGGACGTGGCCTTGCAG 4678100 Query 177102 ATAACAAAAACAGTAGCCTACACACACTGTTGCATCAACCCAGTGATCTACGCGTTCGTG 177161 | || | | ||||||| ||||| ||| ||||||| || |||||||| ||||| Sbjct 4678099 GTGACGGAGGTGATCTCCTACACGCACTGCTGCGTCAACCCCGTCATCTACGCCTTCGTC 4678040 Query 177162 GGGGAGAAGTTTAGAAGACACCTGTACCACTTCTTCCACA 177201 ||||||| ||| | | |||||| |||||||||||||| Sbjct 4678039 GGGGAGAGGTTCCGGAAGCACCTGCGCCACTTCTTCCACA 4678000 Score = 212 bits (234), Expect = 7e-50 Identities = 509/760 (67%), Gaps = 15/760 (2%) Strand=Plus/Minus Query 9562 CTCACTAACATGTTACTGTTAAACTTGGCAATATCTGACTTGCTATTTCTTTTAACTTTG 9621 || || ||||| | ||| | ||| |||| || | |||||||| || || || || || Sbjct 4678750 CTGACCAACATCTACCTGCTCAACCTGGCCATCTGCGACTTGCTCTTCCTCTTCACGCTG 4678691 Query 9622 CCATTTTGGATGCACTATATTGGAATGTATCATGATTGGACTTTTGGTATTTCCCTGTGT 9681 || || ||||| |||||| | ||| || |||| ||| |||||| | |||| Sbjct 4678690 CCCTTCTGGATCCACTATCT--GAA-GTGGAATGAGTGGGTTTTTGGCCACTGTATGTGC 4678634 Query 9682 AAACTGCTCAGGGGTGTGTGTTACATGTCACTGTACAGCCAGGTCTTTTGCATCATCCTG 9741 || ||||| || | | | ||| ||||| | || |||||| |||||||||| Sbjct 4678633 AAGTTGCTCTCAGGGCTTTACTGCATCGGCTTGTACGGGGAGATCTTTTTCATCATCCTG 4678574 Query 9742 CTAACAGTAGACAGGTATCTAGCTGTTGTCTATGCTGTAACTGCTTTGAGGTTTAGAACA 9801 || || ||||| ||||||| || | ||| |||| || ||| || | | || Sbjct 4678573 CTGACCTTAGACCGGTATCTGGCCATCGTCCATGCCGTGTTTGCCCTGCGAACCCGGACT 4678514 Query 9802 GTAACCTGTGGCATAGTTACCTGTGTATGTACCTGGTTTCTGGCAGGGTTGTTGTCCCTC 9861 || || |||||| | | | |||| || ||| ||||| ||| || || ||||| Sbjct 4678513 GTCACTATTGGCATCATAAGCAGTGTCATCACGTGGGCCCTGGCGGGGCTGGTGGCCCTC 4678454 Query 9862 CCTGAATTTTTCTTTCATGGACACCAAGATGACAATGGTAGG--GTTCAGTGTGATCCTT 9919 ||||||||| |||| ||| ||| || | || | | |||| || | ||| | Sbjct 4678453 CCTGAATTTATCTTCCATAAGGCCCAGGAGCAGTCCGGAATGCTGTTCTGTA-GTTCCCT 4678395 Query 9920 ACTACCCAGAGATGTCTACAA--ATGTTTGGAGGCGCGCCCACGTTGCAAAGGTGATTAT 9977 ||||| ||| | | | | | | |||| || | | | | | | ||| | Sbjct 4678394 G-TACCCCGAG--GACGAGGAGGACGCCTGGAAGCATTTCTATGCCGTGAGGATGAACCT 4678338 Query 9978 GTTAAGTCTCATTTTGCCTCTGCTCATTATGGCTGTCTGCTACTATGTAATTATCAGAAG 10037 || || || | |||| ||||||||||||| |||||||||| | ||| |||| | Sbjct 4678337 CTTGAGCCTGGCTCTGCCCCTGCTCATTATGGTGGTCTGCTACTCCGGAATCATCAAGAC 4678278 Query 10038 ACTGTTGAGGCGCCCCAGCAAGAAGAAGTACAAGGCCATCAGGCTCATCTTTGTCATCAT 10097 ||| |||| | ||||||| ||| ||| ||||||||||| ||||||| ||| ||||||| Sbjct 4678277 GCTGATGAGATGTCCCAGCAGGAAAAAGCACAAGGCCATCCGGCTCATATTTATCATCAT 4678218 Query 10098 GGTGGCCTATTTTGTTTTTTGGACACCCTACAACATTGTTCTCCTACTGTCTACCTTTCA 10157 ||||| || ||| |||| ||| | ||||||||| | || |||| || ||| | ||||| Sbjct 4678217 GGTGGTCTTTTTCATTTTCTGGGCCCCCTACAACCTGGTGGTCCTTCTCTCTGCTTTTCA 4678158 Query 10158 CGCAACCCTTCTTAAC--CTGCAGTGTGCATTGAGCAGTAACTTGGACATGGCTCTGCTG 10215 | | | | || || | || | |||| ||||| | ||||| |||| ||| | Sbjct 4678157 AGAGATCTTCTTTGACATCAGCTGCGTGC--GGAGCAACCAGCTGGACGTGGCCTTGCAG 4678100 Query 10216 ATAACAAAAACAGTAGCCTACACACACTGTTGCATCAACCCAGTGATCTACGCGTTCGTG 10275 | || | | ||||||| ||||| ||| ||||||| || |||||||| ||||| Sbjct 4678099 GTGACGGAGGTGATCTCCTACACGCACTGCTGCGTCAACCCCGTCATCTACGCCTTCGTC 4678040 Query 10276 GGGGAGAAGTTTAGAAGACACCTGTACCACTTCTTCCACA 10315 ||||||| ||| | | |||||| |||||||||||||| Sbjct 4678039 GGGGAGAGGTTCCGGAAGCACCTGCGCCACTTCTTCCACA 4678000 >seq8166 Length=12950751 Score = 178 bits (196), Expect = 2e-39 Identities = 136/161 (84%), Gaps = 0/161 (0%) Strand=Plus/Plus Query 145750 AGGCCCGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGTAGCTGGCTATGTTGAAGGGC 145809 ||||| |||| ||| |||| ||||||||| ||||||| ||||||||| |||||||||||| Sbjct 4309625 AGGCCGGTGATGTGTGCGATCATGTAGGTGAGCAGGGCGTAGCTGGCGATGTTGAAGGGC 4309684 Query 145810 ACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCAGGAGAGCTCCCCGCCCGCC 145869 || || ||||||||||| | || | |||||||||||||||||| ||||| ||| | || Sbjct 4309685 ACACCTAGCCCCATGTCTGCTGACCTCTGGTACAGCTGGCAGGACAGCTCACCGTTCACC 4309744 Query 145870 ACGTAGAACTGGCACAGGAGGTGGCAGGGCGGCAGGGCCAT 145910 |||||||||||||| ||| ||||| || ||||||||||| Sbjct 4309745 ACGTAGAACTGGCAGAGGGCATGGCATGGGGGCAGGGCCAT 4309785 >seq3078 Length=2150095 Score = 150 bits (166), Expect = 2e-31 Identities = 128/157 (82%), Gaps = 3/157 (2%) Strand=Plus/Minus Query 138082 CAGCGCCTCAGCCTCACCCTGAGGGTTTTGAGCTTTTCCCCCAGGGAGTTCACTTTATCC 138141 ||||||| |||| || ||| || || || ||||| |||||||| |||||||| ||| Sbjct 335654 CAGCGCCGCAGCTGCAGCCTCAGCGTCTTCAGCTTCTCCCCCAGCGAGTTCACGGGCTCC 335595 Query 138142 TTTTCCTGGTCGGTGCTGTGGTTCTCGGCCTGGGGCATCACCTCCTCCAGGTAAAACTGG 138201 || ||||| || ||| |||||||||||||||||||||| ||||||||||||||| Sbjct 335594 TTGAT---GTCGGGGCCCTGGGTCTCGGCCTGGGGCATCACCTCTTCCAGGTAAAACTGG 335538 Query 138202 ATCATCTCAGACAGGGCCTGGCAGCCCAGGTAACCCT 138238 |||||||| |||| ||| ||||| ||||||||||||| Sbjct 335537 ATCATCTCCGACAAGGCTTGGCAACCCAGGTAACCCT 335501 Score = 136 bits (150), Expect = 5e-27 Identities = 87/95 (92%), Gaps = 0/95 (0%) Strand=Plus/Minus Query 137922 TCAGTTTTTCATCTTTGTGGTCATGTAGGCCTCTATGTAGTTAATGAAGATGTCAAACTC 137981 ||||||||||||||| | ||||||||||||||||||||||| ||||||||||||||||| Sbjct 337774 TCAGTTTTTCATCTTCATTGTCATGTAGGCCTCTATGTAGTTGATGAAGATGTCAAACTC 337715 Query 137982 GCTCATGGCCTTGTAGACCCCTTTTTCCTGGAGCT 138016 |||||||| |||||||||||| | |||||||||| Sbjct 337714 ACTCATGGCTTTGTAGACCCCTCTCTCCTGGAGCT 337680 Score = 86.0 bits (94), Expect = 7e-12 Identities = 52/55 (95%), Gaps = 0/55 (0%) Strand=Plus/Minus Query 138020 TGAAGGCGCTCTTCACCTGCTCCACGGCCTTGCTCTTATTCTCGCAGGGCAGGAA 138074 |||||||||||||||||||||||||||| |||||||||||||| |||||||| || Sbjct 336588 TGAAGGCGCTCTTCACCTGCTCCACGGCTTTGCTCTTATTCTCACAGGGCAGAAA 336534 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589326155926760