Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myotis_20davidii_20[refseq_20GCF_5F000327345.1_202012-12-20] 101,769 sequences; 2,059,799,708 total letters Query= NC_002593.1 Length=100999 Score E Sequences producing significant alignments: (Bits) Value seq13340 131 1e-25 seq101769 122 6e-23 seq14566 98.7 6e-16 seq10844 93.3 3e-14 seq7603 89.7 3e-13 seq4008 89.7 3e-13 seq19127 84.2 1e-11 seq12718 82.4 5e-11 >seq13340 Length=2707246 Score = 131 bits (144), Expect = 1e-25 Identities = 165/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || || | ||| | ||| |||||||| | ||| |||||||| ||||||||||||||| Sbjct 1287528 CCACCTCTCAGGCGCAGGACCAGGTGCAGAGTGGACTCTTTCTGGATGTTGTAGTCGGAC 1287587 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || || |||| |||| ||||||||| ||||| || |||||||||||||| ||| Sbjct 1287588 AGGGTGCGCCCGTCTTCCAGCTGCTTGCCGGCGAAGATCAGCCGCTGCTGGTCAGGGGGG 1287647 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | || ||| ||||| ||||| ||| | || | || | || | | ||||| Sbjct 1287648 ATGCCCTCTTTGTCTTGGATCTTGGCCTTGACATTCTCGATGGTGTCACTGGGCTCGACC 1287707 Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 || | |||||||| |||||||| | || ||||| ||||||||||| Sbjct 1287708 TCGAGGGTGATGGTCTTGCCGGTCAAGGTCTTCACGAAGATCTGCAT 1287754 Score = 129 bits (142), Expect = 4e-25 Identities = 159/215 (74%), Gaps = 2/215 (1%) Strand=Plus/Plus Query 34177 CAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC-AGCTGACGGTCGT 34235 ||| |||||||| | ||| |||||||| ||||||||||||||| || || || ||| Sbjct 1286630 CAGGACCAGGTGCAGAGTGGACTCTTTCTGGATGTTGTAGTCGGACAAGGTG-CGCCCGT 1286688 Query 34236 CGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGT 34295 | |||| ||||||||| ||||| || |||||||||||||| ||| | || ||| |||| Sbjct 1286689 CTTCCAGCTGCTTGCCGGCGAAGATCAGCCGCTGCTGGTCAGGGGGGATGCCCTCTTTGT 1286748 Query 34296 CGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGG 34355 | ||||| ||| | || | || | || | | ||||| || | ||||||| Sbjct 1286749 CTTGGATCTTGGCCTTGACATTCTCGATGGTGTCACTGGGCTCGACCTCGAGGGTGATGG 1286808 Query 34356 TTTTGCCGGTGAGAGTTTTCACAAAGATCTGCATC 34390 | |||||||| | || ||||| |||||||||||| Sbjct 1286809 TCTTGCCGGTCAAGGTCTTCACGAAGATCTGCATC 1286843 Score = 127 bits (140), Expect = 1e-24 Identities = 165/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || || | ||| | ||| |||||||| | ||| |||||||| ||||||||||||||| Sbjct 1286844 CCACCTCTCAGGCGCAGGACCAGGTGCAGAGTGGACTCTTTCTGGATGTTGTAGTCGGAC 1286903 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || || |||| |||| ||||||||| ||||| || |||||||||||||| ||| Sbjct 1286904 AGGGTGCGCCCGTCTTCCAGCTGCTTGCCGGCGAAGATCAGCCGCTGCTGGTCAGGGGGG 1286963 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | || ||| ||||| ||||| ||| | | | || | || | | ||||| Sbjct 1286964 ATGCCCTCTTTGTCTTGGATCTTGGCCTTGACGTTCTCGATGGTGTCACTGGGCTCGACC 1287023 Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCATC 34390 || | |||||||| |||||||| | || ||||| |||||||||||| Sbjct 1287024 TCGAGGGTGATGGTCTTGCCGGTCAAGGTCTTCACGAAGATCTGCATC 1287071 Score = 127 bits (140), Expect = 1e-24 Identities = 165/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || || | ||| | ||| |||||||| | ||| |||||||| ||||||||||||||| Sbjct 1287072 CCACCTCTCAGGCGCAGGACCAGGTGCAGAGTGGACTCTTTCTGGATGTTGTAGTCGGAC 1287131 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || || |||| |||| ||||||||| ||||| || |||||||||||||| ||| Sbjct 1287132 AGGGTGCGCCCGTCTTCCAGCTGCTTGCCGGCGAAGATCAGCCGCTGCTGGTCAGGGGGG 1287191 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | || ||| ||||| ||||| ||| | | | || | || | | ||||| Sbjct 1287192 ATGCCCTCTTTGTCTTGGATCTTGGCCTTGACGTTCTCGATGGTGTCACTGGGCTCGACC 1287251 Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCATC 34390 || | |||||||| |||||||| | || ||||| |||||||||||| Sbjct 1287252 TCGAGGGTGATGGTCTTGCCGGTCAAGGTCTTCACGAAGATCTGCATC 1287299 Score = 127 bits (140), Expect = 1e-24 Identities = 165/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || || | ||| | ||| |||||||| | ||| |||||||| ||||||||||||||| Sbjct 1287300 CCACCTCTCAGGCGCAGGACCAGGTGCAGAGTGGACTCTTTCTGGATGTTGTAGTCGGAC 1287359 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || || |||| |||| ||||||||| ||||| || |||||||||||||| ||| Sbjct 1287360 AGGGTGCGCCCGTCTTCCAGCTGCTTGCCGGCGAAGATCAGCCGCTGCTGGTCAGGGGGG 1287419 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | || ||| ||||| ||||| ||| | | | || | || | | ||||| Sbjct 1287420 ATGCCCTCTTTGTCTTGGATCTTGGCCTTGACGTTCTCGATGGTGTCACTGGGCTCGACC 1287479 Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCATC 34390 || | |||||||| |||||||| | || ||||| |||||||||||| Sbjct 1287480 TCGAGGGTGATGGTCTTGCCGGTCAAGGTCTTCACGAAGATCTGCATC 1287527 >seq101769 Length=1662402 Score = 122 bits (134), Expect = 6e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || || | ||| | ||| |||||||| | || |||||||| ||||||||||| || Sbjct 33385 CCACCCCTCAGGCGCAGGACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCAGAA 33444 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || ||| | || |||| |||||||||||| || ||||||| |||||||||| || Sbjct 33445 AGAGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCGGGAGGG 33504 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | || ||||| || ||||| ||| | || | || | ||| | | || || Sbjct 33505 ATGCCTTCCTTATCCTGGATCTTGGCCTTCACATTCTCAATGGTATCACTGGGCTCCACC 33564 Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 |||| |||||||| |||||||| || || ||||| ||||||||||| Sbjct 33565 TCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 33611 Score = 113 bits (124), Expect = 3e-20 Identities = 152/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237 || |||||||| | || |||||||| |||||||| || || || ||| | || Sbjct 33172 AGGACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCT 33231 Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCG 34297 |||| |||||||||||| || ||||||| |||||||||| || | || ||||| || Sbjct 33232 TCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCGGGAGGGATGCCTTCCTTATCC 33291 Query 34298 GCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTT 34357 ||||| ||| | || | || | ||| | | || || |||| |||||||| Sbjct 33292 TGGATCTTGGCCTTCACATTCTCAATGGTATCACTGGGCTCCACCTCCAGGGTGATGGTC 33351 Query 34358 TTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 |||||||| || || ||||| ||||||||||| Sbjct 33352 TTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 33383 Score = 107 bits (118), Expect = 1e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || || | ||| | ||| |||||||| | || |||||||| |||||||| || || Sbjct 33613 CCACCCCTCAGGCGCAGGACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAATCAGAA 33672 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || ||| | || |||| |||||||||||| || ||||||| ||||||||| ||| Sbjct 33673 AGAGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCAGGGGGG 33732 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | || ||||| || ||||| ||| | || | || | || | | || || Sbjct 33733 ATGCCTTCCTTATCCTGGATCTTGGCCTTAACATTCTCAATGGTGTCACTGGGCTCCACC 33792 Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 |||| |||||||| |||||||| || || ||||| ||||| ||||| Sbjct 33793 TCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATTTGCAT 33839 >seq14566 Length=8204985 Score = 98.7 bits (108), Expect = 6e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || || | ||| | ||| |||||||| | || |||| ||| ||||||||||| || Sbjct 746534 CCACCCCTCAGACGCAGGACCAGGTGCAGGGTGGACTCTTCCTGGATGTTGTAGTCAGAA 746475 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || ||| | || |||| |||||| ||||| || ||||||| ||||||||| ||| Sbjct 746474 AGAGTGCGGCCATCTTCCAGCTGCTTTCCTGCAAAGATGAGCCTCTGCTGGTCAGTGGGG 746415 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | || ||||| || ||||| ||| | || | || | || | | || || Sbjct 746414 ATGCCTTCCTTATCCTGGATCTTGGCCTTAACATTCTCAATGGTGTCACTGGGCTCCACC 746355 Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 |||| | |||||| |||||||| || || ||||| ||||| ||||| Sbjct 746354 TCCAAGGAGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATTTGCAT 746308 >seq10844 Length=7385475 Score = 93.3 bits (102), Expect = 3e-14 Identities = 153/218 (70%), Gaps = 2/218 (1%) Strand=Plus/Minus Query 34177 CAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTC 34236 |||||||| ||| | || |||||||| || |||||||| || || || | || Sbjct 3309422 CAGCACCAAGTGCAGGGTGGACTCTTTCTGAATATTGTAGTCTGAGAGAGTGCGACCATC 3309363 Query 34237 GTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTC 34296 || | ||| ||||| || ||||| || ||||||||||| || | || ||||||||| Sbjct 3309362 CTCTAGCTGTTTGCCCGCAAAAATCAGACGCTGCTGGTCAGGTGGGATGCCCTCCTTGTC 3309303 Query 34297 GGCTATCTTTTGCTTT-AGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGG 34355 || ||| ||||| | || | || | || | | || || || | ||||||| Sbjct 3309302 TTGGAT-TTTAGCTTTGACATTCTCAATGGTGTCACTGGGCTCAACCTCAAGGGTGATGG 3309244 Query 34356 TTTTGCCGGTGAGAGTTTTCACAAAGATCTGCATCGCT 34393 | ||||| || || || |||||||||||||||||| || Sbjct 3309243 TCTTGCCAGTCAGGGTCTTCACAAAGATCTGCATCTCT 3309206 >seq7603 Length=6857920 Score = 89.7 bits (98), Expect = 3e-13 Identities = 157/223 (70%), Gaps = 12/223 (5%) Strand=Plus/Plus Query 34177 CAGCACCAGGTGTA--AAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGC---TGACGG 34231 |||||||| ||| | | | ||| ||||||| || |||||||| || || |||| Sbjct 2062661 CAGCACCAAGTGCAGGATGGACT--CTTTCTGAATATTGTAGTCTGAGAGAGTGTGAC-- 2062716 Query 34232 TCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCC 34291 | || || | ||| ||||| || ||||| || ||||||||||| || | || |||| Sbjct 2062717 -CATCCTCTAGCTGTTTGCCCGCCAAAATCAGACGCTGCTGGTCAGGTGGGATGCCCTCC 2062775 Query 34292 TTGTCGGCTATCTTTTGCTTT-AGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGT 34350 ||||| || ||| ||||| | || | || | || | | || || || | || Sbjct 2062776 TTGTCTTGGAT-TTTAGCTTTGACATTCTCAATGGTGTCACTGGGCTCAACCTCAAGGGT 2062834 Query 34351 GATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCATCGCT 34393 |||||| ||||| || || || |||||||||||||||||| || Sbjct 2062835 GATGGTCTTGCCAGTCAGGGTCTTCACAAAGATCTGCATCTCT 2062877 >seq4008 Length=4289301 Score = 89.7 bits (98), Expect = 3e-13 Identities = 148/214 (69%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 34177 CAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTC 34236 ||| |||||||| | ||| || |||| ||||||||||| ||||| | |||| Sbjct 405277 CAGGACCAGGTGCAGAGTGGACTCCTTCTAGATGTTGTAGTCAGACAGGGTGTGCCCGTC 405218 Query 34237 GTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTC 34296 |||| |||||||| ||||| || ||||| |||||||| ||| | || ||| ||||| Sbjct 405217 TTCCAGCTGCTTGCTCGCGAAGATCAGCCGTTGCTGGTCATGGGGGATGCCCTCTTTGTC 405158 Query 34297 GGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGT 34356 ||||| ||| | || | | | || | | ||||| |||| ||||||| Sbjct 405157 TTGGATCTTGGCCTTGACATTCTCGAGGGTGTCACTGGGCTCGACCTCCAGGGTGATGGC 405098 Query 34357 TTTGCCGGTGAGAGTTTTCACAAAGATCTGCATC 34390 |||| ||| | || |||| |||||||||||| Sbjct 405097 CTTGCTGGTCAAGGTCTTCATGAAGATCTGCATC 405064 >seq19127 Length=6355749 Score = 84.2 bits (92), Expect = 1e-11 Identities = 152/217 (70%), Gaps = 13/217 (6%) Strand=Plus/Plus Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237 ||||||| ||||| ||| | || |||| ||||||||||| || || | | | || Sbjct 5647359 AGCACCAAGTGTAGGGTA--TACTCTCTGAATGTTGTAGTCTGAAAGAGTGCAGCCATCC 5647416 Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTC-GACGGGCACGCTCTCCTTGTC 34296 |||| || ||||| | ||||| || ||||| ||| | | |||| | || ||||||||| Sbjct 5647417 TCCAGTTGTTTGCCCACAAAAATCAGGCGCTGTTGGGCAGGCGGG-ATGCCCTCCTTGTC 5647475 Query 34297 GGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGT 34356 | |||||||| ||| || ||| || || || || | |||||||| Sbjct 5647476 TTGGAC--TTTGCTTTTGATATTCTC---AATGGGC----TCAACCTCGAGGGTGATGGT 5647526 Query 34357 TTTGCCGGTGAGAGTTTTCACAAAGATCTGCATCGCT 34393 || || || ||||| |||||||||||||||||| || Sbjct 5647527 CTTCCCAGTCAGAGTCTTCACAAAGATCTGCATCTCT 5647563 >seq12718 Length=1038120 Score = 82.4 bits (90), Expect = 5e-11 Identities = 159/232 (69%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 ||||| | || | |||||||| ||| | || ||||||| || |||||||| || Sbjct 56381 CCGCCCCTGAGACGCAGCACCAAGTGCAGGGTGGACTCTTTCTAAATATTGTAGTCTGAG 56322 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || || | || || | ||| ||||| || ||||| || |||||||||| || Sbjct 56321 AGAGTGCGACCATCCTCTAGCTGTTTGCCCGCAAAAATCAGACGCTGCTGGTTAGGTGGG 56262 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTT-AGATCGGCTATCGAATCGGTCGATTCGAC 34341 | || |||||||| || ||| ||||| | || | || | || | | || || Sbjct 56261 ATGCCGTCCTTGTCTTGGAT-TTTAGCTTTGACATTCTCAATGGTGTCACTGGGCTCAAC 56203 Query 34342 GTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCATCGCT 34393 || | |||||||| ||||| || || || |||||||||||||||||| || Sbjct 56202 CTCAAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACAAAGATCTGCATCTCT 56151 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 322671290668640