Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myotis_20davidii_20[refseq_20GCF_5F000327345.1_202012-12-20] 101,769 sequences; 2,059,799,708 total letters Query= NC_002665.1 Length=108873 Score E Sequences producing significant alignments: (Bits) Value seq5233 1644 0.0 seq16584 1232 0.0 seq13404 95.1 8e-15 >seq5233 Length=464420 Score = 1644 bits (1822), Expect = 0.0 Identities = 1390/1719 (81%), Gaps = 75/1719 (4%) Strand=Plus/Plus Query 107088 AGCATGACTAGCTGGTTTGCAGCATCAGGTTACAGATGTCCATC-----CACAAGGGT-- 107140 ||||||| |||| ||||| | |||||||| ||| ||| | | ||||||| Sbjct 380165 AGCATGAGCAGCTAGTTTGTAAGGTCAGGTTATAGACCTCCGTTAGCAACCCAAGGGTAA 380224 Query 107141 ------CTTAGGCAGGACTTGACTGAGGATATTTGTCTATAGAAGACATCTATCTTTACC 107194 | |||||||| |||||||||||||||||| ||| |||| | || ||| ||| || Sbjct 380225 GAAATTCCTAGGCAGGTCTTGACTGAGGATATTTGCCTAGAGAAAAAATATAT-TTTGCC 380283 Query 107195 ATCACTCTGGAGTTGAACTTGATGTTCT--------------GGATTAGTTTGTAATTAA 107240 | |||| |||||||| | ||| ||||| || |||||||||||| | Sbjct 380284 ACCACTTTGGAGTTGGAGTTGTTGTTCCTGGGAACACATTCAGGGTTAGTTTGTAATCGA 380343 Query 107241 AGGCATTTTGTTCTGTCCAAGGATCTC---CTCCTCCACCTTGCCTGTGCCCAAACTCTC 107297 |||||||||||||||||||||||| | |||||| |||| |||| || |||||||| Sbjct 380344 AGGCATTTTGTTCTGTCCAAGGATTCCAACCTCCTCTTCCTTCCCTGGGCTCAAACTCTA 380403 Query 107298 CTGATCTCCCATCCCATGAAGATGGCTGGGTGGAAGAAGAAGCTTTGCCGGGGACATCAT 107357 |||||||||| ||||||||||| || ||||||||||||| || ||| || ||| | Sbjct 380404 TTGATCTCCCAGACCATGAAGATGACTTGGTGGAAGAAGAAACTCTGCAGGCAGCATTAC 380463 Query 107358 CTGTGGGCCCTGGGCTGCTATATGCTGCTGGCCGTTGTTTCTCTGAGACTTTCCCTCAGG 107417 ||||||||||||||||||||| ||||||||||| ||||| |||||||| | || ||||| Sbjct 380464 CTGTGGGCCCTGGGCTGCTATTTGCTGCTGGCCATTGTTGCTCTGAGATTCTCTCTCAGA 380523 Query 107418 TTTAAATGTGATGTAGATTCCTTGGATCTGGAGTCCAGGGACTTCCAGAGTCAGCACTGT 107477 || |||||||| | |||||| ||||||||||||||| |||||||| Sbjct 380524 TTGAAATGTGACTTTGATTCCCTGGATCTGGAGTCCA---------------AGCACTGT 380568 Query 107478 AGGGACATGTTGTACAATAGCCTGAAGCTGCCAGCAAAGAGATCCATCAACTGTTCTGGG 107537 |||||||| |||||||| |||| | || |||||| ||||||||||||||||||| | Sbjct 380569 AGGGACATCTTGTACAAGTCCCTGCAATTGACAGCAAGGAGATCCATCAACTGTTCTAGA 380628 Query 107538 ATCACGCGAGGGGACCAGGAAGCAGTGGTCCAGGCCCTCCTAGACAACCTGGAAGTGAAG 107597 |||| | ||||||| ||||||||||| | |||| ||||| |||| ||||| || ||| Sbjct 380629 ATCATCCAAGGGGACAAGGAAGCAGTGATTGAGGCTCTCCTGGACAGGCTGGAGGTCAAG 380688 Query 107598 AAAAAGCGGTCGCCTCTCACTGGCACCTATTACCTCAACATAACCAGAGACTGTGAGCGC 107657 || ||| || |||| |||| | ||| | ||| ||||||| ||||||||||||||| | Sbjct 380689 AAGAAGTGGAAGCCTTTCACAGACACTGACTACATCAACATGACCAGAGACTGTGAGTAC 380748 Query 107658 TTCAAGGCCCAAAGGAAGTTCATACAGTTCCCACTGAGTAAAGAAGAGCTAGACTTCCCC 107717 || |||||| |||||||||||||||||| |||||| || ||||| ||| |||||||||| Sbjct 380749 TTTAAGGCCAAAAGGAAGTTCATACAGTACCCACTCAGCAAAGAGGAGTTAGACTTCCCT 380808 Query 107718 ATTGCCTACTCGATGGTGGTCCATGAGAAGATTGAAAACTTTGAACGGCTGCTGCGAGCC 107777 ||||| ||||| ||||||||||||||||||||||||||||||||| |||||||| |||| Sbjct 380809 ATTGCATACTCTATGGTGGTCCATGAGAAGATTGAAAACTTTGAAAGGCTGCTGAGAGCT 380868 Query 107778 GTGTATGCCCCTCAGAACATATACTGTGTCCACGTGGATGTGAAGTCCCCAGAGACTTTC 107837 ||||||||||||||||||||||| ||||||||||||||| |||||||||||| |||||| Sbjct 380869 GTGTATGCCCCTCAGAACATATATTGTGTCCACGTGGATCAGAAGTCCCCAGACACTTTC 380928 Query 107838 AAAGAGGCGGTCAAGGCCATTATTTCCTGCTTCCCCAATGTCTTCATGGCCAGTAAGTTG 107897 |||||||| |||| ||| |||||||| |||||||| |||||||| || |||||||||||| Sbjct 380929 AAAGAGGCAGTCAGGGCAATTATTTCATGCTTCCCAAATGTCTTTATAGCCAGTAAGTTG 380988 Query 107898 GTCCCGGTGGTTTATGCCTCCTGGTCCAGAGTGCAAGCTGACCTGAACTGTATGGAAGAC 107957 || | |||||||||||||||||||||||| ||||| || ||||||||||||||||||||| Sbjct 380989 GTTCGGGTGGTTTATGCCTCCTGGTCCAGGGTGCAGGCGGACCTGAACTGTATGGAAGAC 381048 Query 107958 TTGCTCCAGAGCTCAGTGCCATGGAAGTACTTACTGAATACATGCGGGACAGACTTCCCC 108017 |||||||||||||||||||| ||||| ||||| |||||||||||||| |||||||| || Sbjct 381049 TTGCTCCAGAGCTCAGTGCCCTGGAAATACTTGCTGAATACATGCGGAACAGACTTTCCT 381108 Query 108018 ATAAAGACCAATGCCGAGATGGTCCTGGCCCTCAAGATGTTGAAGGGTAAGAACAGTATG 108077 |||||||||||||| ||||||||||||||||||||||||||||| || |||||||||||| Sbjct 381109 ATAAAGACCAATGCTGAGATGGTCCTGGCCCTCAAGATGTTGAATGGGAAGAACAGTATG 381168 Query 108078 GAGTCTGAGGTACCTTCTGAGTCCaaaaaaaaTCGCTGGAAATACCGCTATGAGGTGACA 108137 ||||| ||| ||||| |||||| ||||| | ||||||| |||| | ||||||||| ||| Sbjct 381169 GAGTCCGAGATACCTACTGAGTACAAAAGATCTCGCTGGCAATATCACTATGAGGTAACA 381228 Query 108138 GACACACTGTACCCTACCAGCAAGATGAAGGACCCTCCCCCTGATAATTTACCCATGTTC 108197 |||||| | || || | ||||| |||||||||||||||| |||||||||| |||||| Sbjct 381229 GACACAATACACGTAACTAACAAGAAGAAGGACCCTCCCCCTAATAATTTACCTATGTTC 381288 Query 108198 ACAGGGAATGCCTATTTTGTGGCCTCTCGAGCCTTTGTCCAACATGTCTTAGACAACCCT 108257 ||||||||| || ||||||| ||||||| ||||||||| || ||||| || ||||| Sbjct 381289 GTAGGGAATGCTTACATTGTGGCTTCTCGAGGCTTTGTCCAGCAGGTCTTTGAGAACCCC 381348 Query 108258 AAATCCCAAAGACTGGTTGAATGGGTCAAAGACACCTATAGCCCCGACGAACACCTCTGG 108317 ||| ||| |||| |||| ||||| ||||| |||||||||||||| |||||||||||| Sbjct 381349 AAAGCCCGGCAACTGATTGAGTGGGTGAAAGATACCTATAGCCCCGATGAACACCTCTGG 381408 Query 108318 GCCACCCTTCAGCGTGCTCCGTGGATGCCTGGCTCTGTTCCTAGCCACCCCAAGTATCAC 108377 ||||| ||||||||||| || |||||||||||||||||||| ||||||||||| |||| Sbjct 381409 GCCACACTTCAGCGTGCCCCATGGATGCCTGGCTCTGTTCCCTACCACCCCAAGTTTCAC 381468 Query 108378 ATCTCAGACATGACTGCCATCGCCAGGCTCGTCAAGTGGCAGTACCACGAGGGAGATGTC 108437 || ||||||||| ||||||| |||||||| || || |||||| ||| || ||||| || Sbjct 381469 ATGTCAGACATGGCTGCCATTGCCAGGCTGGTAAAATGGCAGGGCCATGAAGGAGACATC 381528 Query 108438 AGCATGGGGGCGCCTTATGCACCCTGCTCTGGAATCCATCGGAGGGCCATCTGCATTTAC 108497 ||||||||||| ||||||||||| |||||||||| ||||| | |||| |||| ||||| Sbjct 381529 AGCATGGGGGCACCTTATGCACCTTGCTCTGGAACCCATCAGCGGGCTGTCTGTATTTAT 381588 Query 108498 GGGGCCGGGGACCTGTACTGGATTCTCCAGAACCATCACCTCTTGGCAAACAAGTTTGAC 108557 || | |||||||| |||||||||| |||||||||||||| ||||| |||||||| ||| Sbjct 381589 GGCGTTGGGGACCTTCACTGGATTCTTCAGAACCATCACCTGTTGGCCAACAAGTTCGAC 381648 Query 108558 CCGAGGGTGGATGATAACGTCCTGCAGTGCTTAGAAGAGTACCTACGTCATAAGGCCATC 108617 || | |||||||||||| || || |||||||||||||| ||| |||| ||||| ||||| Sbjct 381649 CCAAAGGTGGATGATAATGTTCTTCAGTGCTTAGAAGAATACTTACGGTATAAGACCATC 381708 Query 108618 TATGGGACTGAACTTTGAGCTGCACT---------------------------GTGGGCC 108650 | ||||||||| |||| | |||| ||||| | Sbjct 381709 -AGCAGACTGAACTCTGAGATACACTGAGAGAACTGCTACCTCAGATTGAAAGGTGGGGC 381767 Query 108651 AGGGAC-TGTGCCAACATGCCCAGGGCGTACTGGTACTGTGTGGGGTGGGGGACGAGGGC 108709 | | || ||||| ||||||||||| || |||| || |||||||||||| || ||| | Sbjct 381768 AAGAACATGTGCAAACATGCCCAGAATGTGCTGGGACAGTGTGGGGTGGGAGATCAGGTC 381827 Query 108710 TGTGGAATCCATGGCATCCCCCAGGGTCAGAGGGCTGCT 108748 | |||||||||||||||||| |||||| || |||||||| Sbjct 381828 TCTGGAATCCATGGCATCCCACAGGGTTAGGGGGCTGCT 381866 >seq16584 Length=323294 Score = 1232 bits (1366), Expect = 0.0 Identities = 1070/1326 (81%), Gaps = 24/1326 (2%) Strand=Plus/Minus Query 107268 CTCCTCCACCTTGCCTGTGCCCAAACTCTCCTGATCTCCCATCCCATGAAGATGGCTGGG 107327 |||||| |||| |||||||||||||||| |||||||||||| |||| |||||| | || Sbjct 155916 CTCCTCTTCCTTCCCTGTGCCCAAACTCTACTGATCTCCCATACCATAAAGATGATTTGG 155857 Query 107328 TGGAAGAAGAAGCTTTGCCGGGGACATCATCTGTGGGCCCTGGGCTGCTATATGCTGCTG 107387 |||| |||||| || || ||| | | | ||||||||||||| || |||| ||||| || Sbjct 155856 TGGAGGAAGAAACTCTGTCGGCAGCCTAACCTGTGGGCCCTGGCCT-CTATTTGCTGTTG 155798 Query 107388 GCCGTTGTTTCTCTGAGACTTTCCCTCAGGTTTAAATGTGATGTAGATTCCTTGGATCTG 107447 ||| ||||| |||||||| | || ||||| || |||||||| | |||||| |||||||| Sbjct 155797 GCCATTGTTGCTCTGAGATTCTCTCTCAGATTGAAATGTGACTTTGATTCCCTGGATCTG 155738 Query 107448 GAGTCCAGGGACTTCCAGAGTCAGCACTGTAGGGACATGTTGTACAATAGCCTGAAGCTG 107507 ||||||| ||||| | ||| |||||| ||| ||||| |||||||| |||| || || Sbjct 155737 GAGTCCACAGACTTTCGAAGTAAGCACTATAGAGACATCTTGTACAAGTCCCTGCAGTTG 155678 Query 107508 CCAGCAAAGAGATCCATCAACTGTTCTGGGATCACGCGAGGGGACCAGGAAGCAGTGGTC 107567 |||||| |||||||||||||| |||| | |||| | || |||| |||||||| || | Sbjct 155677 ACAGCAAGGAGATCCATCAACTCTTCTAGAATCATCCAAGAGGACAAGGAAGCAATGATT 155618 Query 107568 CAGGCCCTCCTAGACAACCTGGAAGTGAAGAAAAAGCGGTCGCCTCTCACTGGCACCTAT 107627 |||| || || |||| |||||||| ||||| | || || | | | | ||| | Sbjct 155617 GAGGCTCTTCTGGACAGGCTGGAAGTTAAGAA---GTGGGAGCATTTTATAGACACTGAC 155561 Query 107628 TACCTCAACATAACCAGAGACTGTGAGCGCTTCAAGGCCCAAAGGAAGTTCATACAGTTC 107687 | | ||||||| |||||||| ||||| ||| || ||| ||||||||||||||| || | Sbjct 155560 TGCATCAACATGGCCAGAGACGGTGAGTACTTTAAAGCCAAAAGGAAGTTCATACTGTAC 155501 Query 107688 CCACTGAGTAAAGAAGAGCTAGACTTCCCCATTGCCTACTCGATGGTGGTCCATGAGAAG 107747 ||||| || ||||||||| |||||||||| ||||| ||||| ||||| ||||| ||||| Sbjct 155500 CCACTCAGCAAAGAAGAGTTAGACTTCCCTATTGCATACTCTATGGTAGTCCACAAGAAG 155441 Query 107748 ATTGAAAACTTTGAACGGCTGCTGCGAGCCGTGTATGCCCCTCAGAACATATACTGTGTC 107807 | | ||||||||||| |||||||| |||| |||||| | |||||||||||||| ||||| Sbjct 155440 ACTAAAAACTTTGAAAGGCTGCTGAGAGCTGTGTATACTCCTCAGAACATATATTGTGTT 155381 Query 107808 CACGTGGATGTGAAGTCCCCAGAGACTTTCAAAGAGGCGGTCAAGGCCATTATTTCCTGC 107867 |||||||||| |||||||||||| |||||||||||||| ||| ||| |||||||| ||| Sbjct 155380 CACGTGGATGAGAAGTCCCCAGAAACTTTCAAAGAGGCATTCAGGGCAATTATTTCATGC 155321 Query 107868 TTCCCCAATGTCTTCATGGCCAGTAAGTTGGTCCCGGTGGTTTATGCCTCCTGGTCCAGA 107927 ||||| |||||||| || |||||||||||||| | |||||||||||||||||| |||| Sbjct 155320 TTCCCAAATGTCTTTATAGCCAGTAAGTTGGTTCGGGTGGTTTATGCCTCCTGCCCCAGG 155261 Query 107928 GTGCAAGCTGACCTGAACTGTATGGAAGACTTGCTCCAGAGCTCAGTGCCATGGAAGTAC 107987 || | || |||||||||| ||||||||||||||||||||||||| ||| |||||| ||| Sbjct 155260 GTAAAGGCAGACCTGAACTATATGGAAGACTTGCTCCAGAGCTCAATGCTATGGAAATAC 155201 Query 107988 TTACTGAATACATGCGGGACAGACTTCCCCATAAAGACCAATGCCGAGATGGTCCTGGCC 108047 || |||||||||||||| |||||||| || |||||||||||||| ||||||||||||||| Sbjct 155200 TTCCTGAATACATGCGGAACAGACTTTCCTATAAAGACCAATGCTGAGATGGTCCTGGCC 155141 Query 108048 CTCAAGATGTTGAAGGGTAAGAACAGTATGGAGTCTGAGGTACCTTCTGAGTCCaaaaaa 108107 |||||||||||||| || ||||| ||||||||||||||| ||||| |||||| || Sbjct 155140 CTCAAGATGTTGAATGGGAAGAAAAGTATGGAGTCTGAGATACCTACTGAGTACA----- 155086 Query 108108 aaTCGCTGGAAATACCGCTATGAGGTGACAGACACACTGTACCCTACCAGCAAGATGAAG 108167 ||||| | ||||||||| ||||||||| | ||| || | |||||||||| Sbjct 155085 ---------AAATATCACTATGAGGTAACAGACACAATATACATAACTAACAAGATGAAG 155035 Query 108168 GACCCTCCCCCTGATAATTTACCCATGTTCACAGGGAATGCCTATTTTGTGGCCTCTCGA 108227 |||||||| ||| |||| ||||| || |||| ||||||||||| ||||||| ||| || Sbjct 155034 GACCCTCCACCTAATAACTTACCTAT-TTCATGGGGAATGCCTACATTGTGGCTTCTTGA 154976 Query 108228 GCCTTTGTCCAACATGTCTTAGACAACCCTAAATCCCAAAGACTGGTTGAATGGGTCAAA 108287 | ||||||||| || ||||| || ||||| ||| |||| |||| ||| |||| || Sbjct 154975 GGCTTTGTCCAGCAGGTCTTCGAGAACCCCAAAGCCCAGCAACTGACTGAGTGGG--CAA 154918 Query 108288 GACACCTATAGCCCCGACGAACACCTCTGGGCCACCCTTCAGCGTGCTCCGTGGATGCCT 108347 || ||||||||||| || |||||||||| || || ||||||||||| || ||||||||| Sbjct 154917 GATACCTATAGCCCTGATGAACACCTCTAGGTCATGCTTCAGCGTGCCCCATGGATGCCT 154858 Query 108348 GGCTCTGTTCCTAGCCACCCCAAGTATCACATCTCAGACATGACTGCCATCGCCAGGCTC 108407 ||||||||||| ||||||||||| |||||| ||||||||| |||||| |||||||| Sbjct 154857 GGCTCTGTTCCCTACCACCCCAAGTTTCACATGTCAGACATGGCTGCCACTGCCAGGCTG 154798 Query 108408 GTCAAGTGGCAGTACCACGAGGGAGATGTCAGCATGGGGGCGCCTTATGCACCCTGCTCT 108467 || ||||||||| ||| || ||||| ||||||||||||| ||||||||||| |||||| Sbjct 154797 GTAAAGTGGCAGGGCCATGAAGGAGACATCAGCATGGGGGCACCTTATGCACCTTGCTCT 154738 Query 108468 GGAATCCATCGGAGGGCCATCTGCATTTACGGGGCCGGGGACCTGTACTGGATTCTCCAG 108527 |||| ||| | | | | ||||| ||||| || |||||| | |||||||||| ||| Sbjct 154737 GGAACCCACCAGCAGTCTATCTGTATTTATGGCTTTGGGGACTTTCACTGGATTCTTCAG 154678 Query 108528 AACCATCACCTCTTGGCAAACAAGTTTGACCCGAGGGTGGATGATAACGTCCTGCAGTGC 108587 ||||||||||| ||| | ||||||||| ||| | |||| |||| || || |||||| Sbjct 154677 AACCATCACCTGTTGACCAACAAGTTTAACCTAA---AGGATAATAATGTTCTTCAGTGC 154621 Query 108588 TTAGAA 108593 |||||| Sbjct 154620 TTAGAA 154615 Score = 87.8 bits (96), Expect = 1e-12 Identities = 74/90 (82%), Gaps = 1/90 (1%) Strand=Plus/Minus Query 108659 TGCCAACATGCCCAGGGCGTACTGGTACTGTGTGGGGTGGGGGACGAGGGCTGTGGAATC 108718 ||| ||||||||||| || |||| || ||||| | |||| ||| ||| || ||||||| Sbjct 154407 TGCAAACATGCCCAGAATGTTCTGGGACAGTGTGAG-TGGGAGACCAGGTCTCTGGAATC 154349 Query 108719 CATGGCATCCCCCAGGGTCAGAGGGCTGCT 108748 ||||||||||| |||||| || |||||||| Sbjct 154348 CATGGCATCCCGCAGGGTTAGGGGGCTGCT 154319 >seq13404 Length=4903880 Score = 95.1 bits (104), Expect = 8e-15 Identities = 196/286 (69%), Gaps = 8/286 (3%) Strand=Plus/Plus Query 108276 GAATGGGTCAAAGACACCTATAGCCCCGACGAACACCTCTGGGCCACCCTTCAGCGTGCT 108335 || |||| |||||||| || || || ||||| | ||||||||||| ||||| | | | Sbjct 40955 GAGTGGGCAAAAGACACATACAGTCCGGACGAGTATCTCTGGGCCACTATTCAGAG-GAT 41013 Query 108336 CCGTGGA-TGCCTGGCTCTGT-TCCT--AGCCACCCCAAGTATCACATCTCAGACATGAC 108391 || || | | |||||||| | |||| || || ||||| |||| || || ||| Sbjct 41014 CCCTGAAGTCCCTGGCTCACTGTCCTTAAGTCA---TAAGTACGACATGTCCGATATGCA 41070 Query 108392 TGCCATCGCCAGGCTCGTCAAGTGGCAGTACCACGAGGGAGATGTCAGCATGGGGGCGCC 108451 || || || ||| | ||||| ||||||||| || || || || || ||| || || Sbjct 41071 AGCAATTGCTAGGTTTGTCAAATGGCAGTACTTTGAAGGTGACGTTTACAAGGGCGCACC 41130 Query 108452 TTATGCACCCTGCTCTGGAATCCATCGGAGGGCCATCTGCATTTACGGGGCCGGGGACCT 108511 ||| |||||||| || | || | | || | || ||| ||||| || ||| | Sbjct 41131 CTATCCACCCTGCAACGGGGTGCACGTGCGCTCCGTGTGTGTTTTTGGGGCAGGTGACTT 41190 Query 108512 GTACTGGATTCTCCAGAACCATCACCTCTTGGCAAACAAGTTTGAC 108557 | ||||||| || | || || ||| | || || || ||||||||| Sbjct 41191 GAACTGGATACTGCGCAAGCACCACTTGTTTGCCAATAAGTTTGAC 41236 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 347836838833506