Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myotis_20davidii_20[refseq_20GCF_5F000327345.1_202012-12-20] 101,769 sequences; 2,059,799,708 total letters Query= NC_003083.1 Length=118584 Score E Sequences producing significant alignments: (Bits) Value seq101769 95.1 9e-15 seq14566 86.0 5e-12 seq10844 84.2 2e-11 seq13340 82.4 6e-11 seq10317 82.4 6e-11 >seq101769 Length=1662402 Score = 95.1 bits (104), Expect = 9e-15 Identities = 150/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 18114 AGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCT 18173 || |||| ||| || || || ||||| || |||||||| || | | || | |||| Sbjct 33628 AGGACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCT 33687 Query 18174 TCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCG 18233 |||| || ||||| ||| |||| || || || || || ||| | |||||||||||| Sbjct 33688 TCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCAGGGGGGATGCCTTCCTTATCC 33747 Query 18234 GCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTT 18293 || | ||| || | ||| ||||||| |||||| || | ||||||| | Sbjct 33748 TGGATCTTGGCCTTAACATTCTCAATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTC 33807 Query 18294 TTGCCGGTCAATGTTTTTACAAAAATTTGCATTTT 18328 |||||||||| || || || || ||||||||||| Sbjct 33808 TTGCCGGTCAGGGTCTTCACGAAGATTTGCATTTT 33842 >seq14566 Length=8204985 Score = 86.0 bits (94), Expect = 5e-12 Identities = 148/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 18114 AGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCT 18173 || |||| ||| || || || |||| || ||||||||||| | | || | |||| Sbjct 746519 AGGACCAGGTGCAGGGTGGACTCTTCCTGGATGTTGTAGTCAGAAAGAGTGCGGCCATCT 746460 Query 18174 TCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCG 18233 |||| || || || ||| |||| || || || || || ||| | |||||||||||| Sbjct 746459 TCCAGCTGCTTTCCTGCAAAGATGAGCCTCTGCTGGTCAGTGGGGATGCCTTCCTTATCC 746400 Query 18234 GCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTT 18293 || | ||| || | ||| ||||||| |||||| || | || |||| | Sbjct 746399 TGGATCTTGGCCTTAACATTCTCAATGGTGTCACTGGGCTCCACCTCCAAGGAGATGGTC 746340 Query 18294 TTGCCGGTCAATGTTTTTACAAAAATTTGCATTTT 18328 |||||||||| || || || || ||||||||||| Sbjct 746339 TTGCCGGTCAGGGTCTTCACGAAGATTTGCATTTT 746305 >seq10844 Length=7385475 Score = 84.2 bits (92), Expect = 2e-11 Identities = 148/213 (69%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 18114 AGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCT 18173 || |||| ||| || || || ||||| ||||| |||||||| | | || || ||| Sbjct 3309421 AGCACCAAGTGCAGGGTGGACTCTTTCTGAATATTGTAGTCTGAGAGAGTGCGACCATCC 3309362 Query 18174 TCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCG 18233 || | |||||||||||| | || || | || || || || | ||| ||||| || Sbjct 3309361 TCTAGCTGTTTGCCCGCAAAAATCAGACGCTGCTGGTCAGGTGGGATGCCCTCCTTGTCT 3309302 Query 18234 GCAATTTGTTGC-TTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCT 18292 |||| | || ||||| | ||| ||||||| |||||| |||| ||||||| | Sbjct 3309301 TGGATTT-TAGCTTTGACATTCTCAATGGTGTCACTGGGCTCAACCTCAAGGGTGATGGT 3309243 Query 18293 TTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325 ||||| |||| || || ||||| || ||||| Sbjct 3309242 CTTGCCAGTCAGGGTCTTCACAAAGATCTGCAT 3309210 >seq13340 Length=2707246 Score = 82.4 bits (90), Expect = 6e-11 Identities = 146/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 18114 AGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCT 18173 || |||| ||| || || || ||||| || ||||||||||||| || || | ||| Sbjct 1287543 AGGACCAGGTGCAGAGTGGACTCTTTCTGGATGTTGTAGTCGGACAGGGTGCGCCCGTCT 1287602 Query 18174 TCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCG 18233 |||| || ||||| || |||| || | || || || ||| | ||| || || || Sbjct 1287603 TCCAGCTGCTTGCCGGCGAAGATCAGCCGCTGCTGGTCAGGGGGGATGCCCTCTTTGTCT 1287662 Query 18234 GCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTT 18293 || | |||||| | | | ||||||| ||||||| || | ||||||| | Sbjct 1287663 TGGATCTTGGCCTTGACATTCTCGATGGTGTCACTGGGCTCGACCTCGAGGGTGATGGTC 1287722 Query 18294 TTGCCGGTCAATGTTTTTACAAAAATTTGCATT 18326 ||||||||||| || || || || || |||||| Sbjct 1287723 TTGCCGGTCAAGGTCTTCACGAAGATCTGCATT 1287755 >seq10317 Length=1945714 Score = 82.4 bits (90), Expect = 6e-11 Identities = 84/110 (76%), Gaps = 0/110 (0%) Strand=Plus/Plus Query 18123 TGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCCAATTGT 18182 ||||| || || || ||||||||||||||||| | || || | | |||||||| ||| Sbjct 477370 TGAAGCGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTACTCCCATCTTCCAGTTGC 477429 Query 18183 TTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATC 18232 ||||| ||| |||| |||||||| ||||| || | ||||||| ||| Sbjct 477430 TTGCCAGCAAAGATCAGTCTTTGCTGATCAGGAGGAATTCCTTCCTAATC 477479 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 378873495961905