Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myotis_20davidii_20[refseq_20GCF_5F000327345.1_202012-12-20] 101,769 sequences; 2,059,799,708 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq13340 104 2e-17 seq10844 95.1 1e-14 seq12718 89.7 5e-13 seq7603 89.7 5e-13 seq9191 86.0 6e-12 seq18775 84.2 2e-11 >seq13340 Length=2707246 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || ||||| ||||| |||| ||||| || |||||| |||| || || || Sbjct 1287070 ATGCAGATCTTCGTGAAGACCTTGACCGGCAAGACCATCACCCTCGAGGTCGAGCCCAGT 1287011 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| |||| | ||||| | || ||||| || ||| | || || |||||| Sbjct 1287010 GACACCATCGAGAACGTCAAGGCCAAGATCCAAGACAAAGAGGGCATCCCCCCTGACCAG 1286951 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 ||||| || || ||||| ||||| ||| |||||||| || || ||| || ||| Sbjct 1286950 CAGCGGCTGATCTTCGCCGGCAAGCAGCTGGAAGACGGGCGCACCCTGTCCGACTACAAC 1286891 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419 || || ||||| || ||||| || ||||| || | ||||| || || Sbjct 1286890 ATCCAGAAAGAGTCCACTCTGCACCTGGTCCTGCGCCTGAGAGGTGG 1286844 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || ||||| ||||| |||| ||||| || |||||| |||| || || || Sbjct 1287298 ATGCAGATCTTCGTGAAGACCTTGACCGGCAAGACCATCACCCTCGAGGTCGAGCCCAGT 1287239 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| |||| | ||||| | || ||||| || ||| | || || |||||| Sbjct 1287238 GACACCATCGAGAACGTCAAGGCCAAGATCCAAGACAAAGAGGGCATCCCCCCTGACCAG 1287179 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 ||||| || || ||||| ||||| ||| |||||||| || || ||| || ||| Sbjct 1287178 CAGCGGCTGATCTTCGCCGGCAAGCAGCTGGAAGACGGGCGCACCCTGTCCGACTACAAC 1287119 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419 || || ||||| || ||||| || ||||| || | ||||| || || Sbjct 1287118 ATCCAGAAAGAGTCCACTCTGCACCTGGTCCTGCGCCTGAGAGGTGG 1287072 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || ||||| ||||| |||| ||||| || |||||| |||| || || || Sbjct 1287526 ATGCAGATCTTCGTGAAGACCTTGACCGGCAAGACCATCACCCTCGAGGTCGAGCCCAGT 1287467 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| |||| | ||||| | || ||||| || ||| | || || |||||| Sbjct 1287466 GACACCATCGAGAACGTCAAGGCCAAGATCCAAGACAAAGAGGGCATCCCCCCTGACCAG 1287407 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 ||||| || || ||||| ||||| ||| |||||||| || || ||| || ||| Sbjct 1287406 CAGCGGCTGATCTTCGCCGGCAAGCAGCTGGAAGACGGGCGCACCCTGTCCGACTACAAC 1287347 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419 || || ||||| || ||||| || ||||| || | ||||| || || Sbjct 1287346 ATCCAGAAAGAGTCCACTCTGCACCTGGTCCTGCGCCTGAGAGGTGG 1287300 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || ||||| ||||| |||| ||||| || |||||| |||| || || || Sbjct 1287754 ATGCAGATCTTCGTGAAGACCTTGACCGGCAAGACCATCACCCTCGAGGTCGAGCCCAGT 1287695 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| |||| | ||||| | || ||||| || ||| | || || |||||| Sbjct 1287694 GACACCATCGAGAATGTCAAGGCCAAGATCCAAGACAAAGAGGGCATCCCCCCTGACCAG 1287635 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 ||||| || || ||||| ||||| ||| |||||||| || || ||| || ||| Sbjct 1287634 CAGCGGCTGATCTTCGCCGGCAAGCAGCTGGAAGACGGGCGCACCCTGTCCGACTACAAC 1287575 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419 || || ||||| || ||||| || ||||| || | ||||| || || Sbjct 1287574 ATCCAGAAAGAGTCCACTCTGCACCTGGTCCTGCGCCTGAGAGGTGG 1287528 Score = 100 bits (110), Expect = 3e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || ||||| ||||| |||| ||||| || |||||| |||| || || || Sbjct 1286842 ATGCAGATCTTCGTGAAGACCTTGACCGGCAAGACCATCACCCTCGAGGTCGAGCCCAGT 1286783 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| |||| | ||||| | || ||||| || ||| | || || |||||| Sbjct 1286782 GACACCATCGAGAATGTCAAGGCCAAGATCCAAGACAAAGAGGGCATCCCCCCTGACCAG 1286723 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 ||||| || || ||||| ||||| ||| |||||||| || || ||| || ||| Sbjct 1286722 CAGCGGCTGATCTTCGCCGGCAAGCAGCTGGAAGACGGGCGCACCTTGTCCGACTACAAC 1286663 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGT 31420 || || ||||| || ||||| || ||||| || | |||| || ||| Sbjct 1286662 ATCCAGAAAGAGTCCACTCTGCACCTGGTCCTGCGCTTGAGAGGGGGT 1286615 >seq10844 Length=7385475 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || || || ||||| ||||| ||||| || |||||| | || ||||| || Sbjct 3309210 ATGCAGATCTTTGTGAAGACCCTGACTGGCAAGACCATCACCCTTGAGGTTGAGCCCAGT 3309269 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| | || | |||||| | ||| |||||||| ||| | || || |||||| Sbjct 3309270 GACACCATTGAGAATGTCAAAGCTAAAATCCAAGACAAGGAGGGCATCCCACCTGACCAG 3309329 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 |||||||| || || || ||||||||| | || || | ||| | || || || Sbjct 3309330 CAGCGTCTGATTTTTGCGGGCAAACAGCTAGAGGATGGTCGCACTCTCTCAGACTACAAT 3309389 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419 ||||| ||||| || || || || |||| || | || ||||| || Sbjct 3309390 ATTCAGAAAGAGTCCACCCTGCACTTGGTGCTGCGTCTCAGGGGTGG 3309436 >seq12718 Length=1038120 Score = 89.7 bits (98), Expect = 5e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || || || ||||| ||||| ||||| || |||||| | || ||||| || Sbjct 56155 ATGCAGATCTTTGTGAAGACCCTGACTGGCAAGACCATCACCCTTGAGGTTGAGCCCAGT 56214 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| | || | |||||| | ||| |||||||| ||| | || || ||||| Sbjct 56215 GACACCATTGAGAATGTCAAAGCTAAAATCCAAGACAAGGACGGCATCCCACCTAACCAG 56274 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 |||||||| || || || ||||||||| | || || | ||| | || || || Sbjct 56275 CAGCGTCTGATTTTTGCGGGCAAACAGCTAGAGGATGGTCGCACTCTCTCAGACTACAAT 56334 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419 ||| | ||||| || || || || |||| || | || |||||||| Sbjct 56335 ATTTAGAAAGAGTCCACCCTGCACTTGGTGCTGCGTCTCAGGGGCGG 56381 >seq7603 Length=6857920 Score = 89.7 bits (98), Expect = 5e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || || || ||||| ||||| ||||| || |||||| | || ||||| || Sbjct 2062873 ATGCAGATCTTTGTGAAGACCCTGACTGGCAAGACCATCACCCTTGAGGTTGAGCCCAGT 2062814 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| | || | |||||| | ||| |||||||| ||| | || || |||||| Sbjct 2062813 GACACCATTGAGAATGTCAAAGCTAAAATCCAAGACAAGGAGGGCATCCCACCTGACCAG 2062754 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 |||||||| || || || ||||||||| | || || | ||| | || || || Sbjct 2062753 CAGCGTCTGATTTTGGCGGGCAAACAGCTAGAGGATGGTCACACTCTCTCAGACTACAAT 2062694 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419 ||||| ||||| || | || || |||| || | || ||||| || Sbjct 2062693 ATTCAGAAAGAGTCCATCCTGCACTTGGTGCTGCGTCTCAGGGGTGG 2062647 >seq9191 Length=3706871 Score = 86.0 bits (94), Expect = 6e-12 Identities = 110/152 (72%), Gaps = 0/152 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || || || ||||| ||||| ||||| || |||||| |||| || ||||| Sbjct 2451252 ATGCAGATCTTTGTGAAGACCCTGACTGGCAAGACCATCACCCTCGAGGTCGAACCCGGT 2451311 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| || | |||||| | ||| ||| ||| ||| | |||||||||||| Sbjct 2451312 GACACCACTGAGAGTGTCAAAGCTAAAATCCAAGACCGGGAGGGCATCCCGCCCGACCAG 2451371 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGA 31344 ||||| || || || || ||||||||| |||| Sbjct 2451372 CAGCGCCTGATTTTTGCCGGCAAACAGCTGGA 2451403 >seq18775 Length=3279689 Score = 84.2 bits (92), Expect = 2e-11 Identities = 153/224 (68%), Gaps = 0/224 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || || || ||||| ||||| ||||| || |||||| | || ||||| || Sbjct 1065513 ATGCAGATCTTTGTGAAGACCCTGACTGGCAAGACCATCACCCTTGAGGTTGAGCCCAGT 1065572 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| || | |||||| | ||| |||||||| ||| | || || |||||| Sbjct 1065573 GACACCAATGAGAATGTCAAAGCTAAAATCCAAGACAAGGAGGGCATCCCACCTGACCAG 1065632 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 |||||||| || || || ||||||||| | || || | ||| | || || || Sbjct 1065633 CAGCGTCTGATTTTTGCGGGCAAACAGCTAGAGGATGGTCACACTCTCTCAGACTACAAT 1065692 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGG 31416 ||||| |||| || || || || || | ||| | || ||||| Sbjct 1065693 ATTCAGGAAGAGTCCACCCTGCACTTGATGCTTCGTCTCAGGGG 1065736 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445199334990480