Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myotis_20davidii_20[refseq_20GCF_5F000327345.1_202012-12-20] 101,769 sequences; 2,059,799,708 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq18467 111 2e-19 seq17099 87.8 3e-12 seq10479 86.0 9e-12 >seq18467 Length=3096793 Score = 111 bits (122), Expect = 2e-19 Identities = 300/454 (66%), Gaps = 10/454 (2%) Strand=Plus/Minus Query 70070 GATCTGGGGCCAGTGTACGGATTCCAGTGGAGGCACTCGGGCACCAAGTATGTAGACTGC 70129 ||| | || || || || || || ||||||||||| | || | | || ||| Sbjct 1469074 GATTTAGGCCCCGTTTATGGCTTTCAGTGGAGGCATTTTGGGGCAGACTACAAAGATATG 1469015 Query 70130 GAGACAGACTATTCGGGTCAGGGTGTTGATCAATTGCAGACAATCATTGACACTCTCAAG 70189 || |||| ||||| | ||| || | || | | |||| | | |||| ||| |||| Sbjct 1469014 GATTCAGATTATTCCGATCAAGGAGCAGACCGACTGCAAAAGGTGATTGGCACAATCAAA 1468955 Query 70190 ACCAATCCAACAGATAGGAGGATCGTAATGTGCTCATGGAATCCTGCAGATTTGCACCAA 70249 ||||| || || || || ||| | |||| | |||||||| ||| | | | Sbjct 1468954 ACCAACCCTGACGACAGAAGAATCATCCTGTGTGCTTGGAATCCAAACGATCTTCCTTCA 1468895 Query 70250 ATGGCACTACCACCGTGTCA--CTGTTTGGCTCAGTTTTAC-TCGT--ACGATGGCAAAT 70304 ||||| || || || || || | | || |||||| ||| | || ||| || | Sbjct 1468894 ATGGCCCTGCCTCCATGCCATGCCCTCTG--TCAGTTCTACGTGGTGAACGGTGACC--- 1468840 Query 70305 TGTCATGCTTAATGTATCAGAGGAGTGCCGACATGGGCCTCGGTGTACCCTTTAACATTG 70364 |||| ||| |||| |||||| || |||||||| || ||||| ||||| ||||| | Sbjct 1468839 TGTCCTGCCAGCTGTACCAGAGGTCAGCAGACATGGGGCTAGGTGTGCCCTTCAACATCG 1468780 Query 70365 CAAGCTATTCTATGTTGACGCACATGATTGCTCACATTACCGGCCTGAAAGCGCACGAGT 70424 | ||||| | || | || ||||| | || ||||| ||||||||||| | || | Sbjct 1468779 CCAGCTACACCCTGCTCACCTACATGGTCGCACACATCACCGGCCTGAAGCCAGGTGACT 1468720 Query 70425 TCGTACACACCATTGGCGACGCTCACGTGTATTTAAATCACATCGAGCCATTAAAGGTGC 70484 || | ||||| | || || || ||| | || || |||||| | ||||| | || ||| Sbjct 1468719 TCCTGCACACTTTGGGAGATGCACACATCTACTTGAATCACGTTGAGCCGCTGAAAATGC 1468660 Query 70485 AACTCGAACGGGAGCCGAGACCTTTTCCCAAGCT 70518 | || |||| || |||| ||||| || ||||| Sbjct 1468659 AGCTTCAACGAGAACCGAAGCCTTTCCCGAAGCT 1468626 >seq17099 Length=1911077 Score = 87.8 bits (96), Expect = 3e-12 Identities = 112/155 (72%), Gaps = 12/155 (8%) Strand=Plus/Plus Query 127393 ACCTTGTACGGCATGCTTTCGAAAAAGAGTGATGTAGCGGACACGTTG--------CG-- 127442 ||||| || ||||| ||| ||||||| |||||||| || | || || Sbjct 1861125 ACCTTATAGGGCATAGATTCAAAAAAGATGGATGTAGCAGAGATTTTCTTCTTGTCCGTC 1861184 Query 127443 --GAATCCGTGCGTCAGGTGGCCTCCGTCGGGCAGATCGAGTCCCATGATTCTACCGTGC 127500 ||| ||||| ||||||||||||||||||||||| || || |||||||| | ||||| Sbjct 1861185 ATGAACCCGTGGGTCAGGTGGCCTCCGTCGGGCAGGTCCAGGCCCATGATGCGCCCGTGG 1861244 Query 127501 GGTTTAACGATTCCAGTGTACACGGCAAAGTTGGC 127535 |||| || | | |||||||| || |||||||| Sbjct 1861245 GGTTCCACCAGGGCGGTGTACACTGCGAAGTTGGC 1861279 >seq10479 Length=2664821 Score = 86.0 bits (94), Expect = 9e-12 Identities = 76/95 (80%), Gaps = 0/95 (0%) Strand=Plus/Plus Query 125428 TGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTTT 125487 ||||||| |||||||| || ||||| |||||||| || || ||| ||| | ||||| | Sbjct 1179354 TGGTGGCGTTCGCCGCAGTGGAGGGAATCTTCTTCTCCGGCTCTTTCGCGTCGATCTTCT 1179413 Query 125488 GGCTCAAGAAGCGCGGACTCATGCCCGGACTGACG 125522 ||||||||||||| || || ||||| || || ||| Sbjct 1179414 GGCTCAAGAAGCGAGGCCTGATGCCTGGCCTCACG 1179448 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 740116489328440