Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myotis_20davidii_20[refseq_20GCF_5F000327345.1_202012-12-20] 101,769 sequences; 2,059,799,708 total letters Query= NC_005336.1 Length=139962 Score E Sequences producing significant alignments: (Bits) Value seq3078 134 1e-26 seq2520 91.5 1e-13 >seq3078 Length=2150095 Score = 134 bits (148), Expect = 1e-26 Identities = 121/152 (80%), Gaps = 0/152 (0%) Strand=Plus/Plus Query 128874 GGCTACCTCGGGTGCCAGGCACTCTCTGAGATGATACAGTTTTACTTGGAAGAGGTGATG 128933 || ||||| || ||||| || | || |||||||| ||||||||| |||||||||||||| Sbjct 335503 GGTTACCTGGGTTGCCAAGCCTTGTCGGAGATGATCCAGTTTTACCTGGAAGAGGTGATG 335562 Query 128934 CCGCAGGCGGAAAATCACGGGCCGGACATCAAAGAGCACGTTAACTCGCTGGGAGAAAAG 128993 || ||||| || | || || || |||||||| |||| ||| ||||||||||| || ||| Sbjct 335563 CCCCAGGCCGAGACCCAGGGCCCCGACATCAAGGAGCCCGTGAACTCGCTGGGGGAGAAG 335622 Query 128994 CTCAAAACGCTGCGTCTTCGACTGCGTCGCTG 129025 || || |||||| | || | ||||| ||||| Sbjct 335623 CTGAAGACGCTGAGGCTGCAGCTGCGGCGCTG 335654 Score = 82.4 bits (90), Expect = 7e-11 Identities = 63/75 (84%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 129092 GCTGCAGGAACGAGGCGTTTACAAGGCCATGAGCGAGTTCGACATATTCATCAACTACAT 129151 ||| ||||| |||| || ||||| |||||||| ||||| ||||| |||||||||||||| Sbjct 337681 GCTCCAGGAGAGAGGGGTCTACAAAGCCATGAGTGAGTTTGACATCTTCATCAACTACAT 337740 Query 129152 AGAATCATACATGAC 129166 ||| | |||||||| Sbjct 337741 AGAGGCCTACATGAC 337755 >seq2520 Length=8653699 Score = 91.5 bits (100), Expect = 1e-13 Identities = 147/209 (70%), Gaps = 2/209 (1%) Strand=Plus/Minus Query 5315 ATGCGTTCGCATATTAGCTGAGCTATCCTGTCTCCCTTCTTAACCTCAAAGTCGCTGTTT 5374 || ||||| || || ||||| || || | ||| || || ||| | ||||| | || Sbjct 1838237 ATCCGTTCACAAATGAGCTGTGCAATTCGGTCACCATTTTTA-CTTCAAAATTTTATTTG 1838179 Query 5375 CCGAAGTTAAACAGCACCACCCCGACATTGCCTCGGTAGTCTTCGTCGATAACGCCAGCG 5434 || || ||||| || || || || | ||| |||| || ||||| || ||||| ||||| Sbjct 1838178 CCAAAATTAAATAGTACAACACCAAGATTTCCTCTATAATCTTCATCTATAACACCAGCT 1838119 Query 5435 CCCACGTCGATAAAGTGTTTGACCGCAAGGCCGGAACGTGGTGCTATGCGTCCGTAGCAA 5494 || || || ||||||||||| | || | || ||||||||| ||| | | | ||||| Sbjct 1838118 CCTACATCTATAAAGTGTTTTGCAGCCAAGCTGGAACGTGGAGCTCCTC-TTCATAGCAC 1838060 Query 5495 CCAGGTGGGAGCTTTATCAGAAGGTCAGT 5523 |||| || || || | ||| |||||| Sbjct 1838059 CCAGAAGGAAGAGCTACCTGAATGTCAGT 1838031 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 447180811119280