Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myotis_20davidii_20[refseq_20GCF_5F000327345.1_202012-12-20] 101,769 sequences; 2,059,799,708 total letters Query= NC_005337.1 Length=134431 Score E Sequences producing significant alignments: (Bits) Value seq3078 118 9e-22 >seq3078 Length=2150095 Score = 118 bits (130), Expect = 9e-22 Identities = 112/143 (78%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 127171 GGGTGCCAAGCTCTGTCTGAGATGATTCAGTTCTACCTCGAAGAGGTCATGCCACAGGCA 127230 || |||||||| |||| |||||||| ||||| ||||| |||||||| ||||| ||||| Sbjct 335512 GGTTGCCAAGCCTTGTCGGAGATGATCCAGTTTTACCTGGAAGAGGTGATGCCCCAGGCC 335571 Query 127231 GAAAATCACGGACCCGACATAAAAGAACACGTCAATTCCCTGGGTGAAAAGCTGAAGACA 127290 || | || || |||||||| || || | ||| || || ||||| || ||||||||||| Sbjct 335572 GAGACCCAGGGCCCCGACATCAAGGAGCCCGTGAACTCGCTGGGGGAGAAGCTGAAGACG 335631 Query 127291 TTGAGACTTCGACTGCGTCGCTG 127313 |||| || | ||||| ||||| Sbjct 335632 CTGAGGCTGCAGCTGCGGCGCTG 335654 Score = 93.3 bits (102), Expect = 4e-14 Identities = 65/74 (88%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 127379 AGCTTCAGGAAAGAGGCGTGTACAAGGCCATGAGTGAGTTTGACATATTCATCAACTACA 127438 |||| ||||| ||||| || ||||| |||||||||||||||||||| ||||||||||||| Sbjct 337680 AGCTCCAGGAGAGAGGGGTCTACAAAGCCATGAGTGAGTTTGACATCTTCATCAACTACA 337739 Query 127439 TCGAGACTTACATG 127452 | ||| | |||||| Sbjct 337740 TAGAGGCCTACATG 337753 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429520999361528