Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myotis_20davidii_20[refseq_20GCF_5F000327345.1_202012-12-20] 101,769 sequences; 2,059,799,708 total letters Query= NC_005832.1 Length=106332 Score E Sequences producing significant alignments: (Bits) Value seq18467 192 4e-44 seq8166 100 2e-16 >seq18467 Length=3096793 Score = 192 bits (212), Expect = 4e-44 Identities = 405/596 (68%), Gaps = 36/596 (6%) Strand=Plus/Plus Query 25388 GGGAAAGGGTCTGGGCTCCCTCTCGAGCTGAGTCTTCAGCGGTTCTACGTGATCCAGGTA 25447 |||||||| | | || || | | ||||| | |||||||| || ||||||| || ||| Sbjct 1468632 GGGAAAGGCT-TCGGTTCTCGTTGAAGCTGCATTTTCAGCGGCTCAACGTGATTCAAGTA 1468690 Query 25448 GACGTGAGCGTCTCCCAGAGTGTGGACAAACTCTCCCGGTTCTAGCCCGGTAACGTAAGC 25507 || ||| || ||||||| |||||| | || || || || | || ||||| | || || Sbjct 1468691 GATGTGTGCATCTCCCAAAGTGTGCAGGAAGTCACCTGGCTTCAGGCCGGTGATGTGTGC 1468750 Query 25508 CATCATGTACGTGAGGAGAAAGTAGCTGGCGATGTTAAAGGGTACCCCGAACCCCATGTC 25567 | |||||| ||||| || ||||||||||||||| ||||| || || | |||||||| Sbjct 1468751 GACCATGTAGGTGAGCAGGGTGTAGCTGGCGATGTTGAAGGGCACACCTAGCCCCATGT- 1468809 Query 25568 CCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTTCGTCGCTCACGTAAAACTGACACA 25627 | | ||||||||||| ||||| || || || || ||| |||||| |||||||| | Sbjct 1468810 CTGCTGACCTCTGGTACAGCTGGCAGGACAGGTCACCGTTCACCACGTAGAACTGACAGA 1468869 Query 25628 TGGTGTAGCACGGAGGAAGAGCTAT--AAGGCCCAAG-TCTTTAGGGTTCCAGGCGCACA 25684 || | ||| ||||| || || || |||| ||| || || || ||||| || |||| Sbjct 1468870 GGGCATGGCATGGAGGCAGGGCCATTGAAGG---AAGATCGTTTGGATTCCAAGCACACA 1468926 Query 25685 CGATGATGCACCTGTCTTCTGGGTTGTCCCTGAT----AAGATCCGCGGTGTTTTGCAGC 25740 |||||| | ||||| || |||||| |||| ||| | |||||||| Sbjct 1468927 GGATGATTCTTCTGTCGTCAGGGTTGGTTTTGATTGTGCCAATCACC----TTTTGCAGT 1468982 Query 25741 TGATCCACCCCCATCCCCGAGTAGTCTGCCCTCATGTCCGTGTACTCTGCTCCGAAATAC 25800 | || | || | || || |||| ||| || |||| ||||| || |||| | Sbjct 1468983 CGGTCTGCTCCTTGATCGGAATAATCTGAATCCATATCTTTGTAGTCTGCCCCAAAATGC 1469042 Query 25801 CTCCACTGGAACCCGTACACCGGTCCTAGGTCTCCATCTTCCCTGTGCTCAAAGCCCCTC 25860 |||||||| || || || || || |||| ||| |||| | |||| | Sbjct 1469043 CTCCACTGAAAGCCATAAACGGGGCCTAAATCT---TCTT--TTATGCTGGA-------- 1469089 Query 25861 TTATCCAAAAAGTCTCTGGAACCATTGGCGTCCCAGATCTTTACCCCCTTCTCGGAGAGC 25920 |||| || || | ||||||||||||||||| |||| ||||| || || Sbjct 1469090 GAATCC---CAGGCT----ATCCATTGGCGTCCCAGATTCTTACTCCCTTGGACGACAGT 1469142 Query 25921 TCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCGCCGTGACGGCCTT 25976 ||||| | |||||||| || ||| |||||||||| || | || ||| |||| Sbjct 1469143 TCTTTAGCATTTGTGGATCCCTTGATAAACCACAGCAACTGCCCCAGGACACCCTT 1469198 >seq8166 Length=12950751 Score = 100 bits (110), Expect = 2e-16 Identities = 120/162 (74%), Gaps = 1/162 (1%) Strand=Plus/Plus Query 25491 AGCCCGGTAACGTAAGCCATCATGTACGTGAGGAGAAAGTAGCTGGCGATGTTAAAGGGT 25550 || ||||| | || || |||||||| ||||| || ||||||||||||||| ||||| Sbjct 4309625 AGGCCGGTGATGTGTGCGATCATGTAGGTGAGCAGGGCGTAGCTGGCGATGTTGAAGGGC 4309684 Query 25551 ACCCCGAACCCCATGTCCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTTCGTCGCT 25610 || || | |||||||| | | ||||||||||| ||||| || || ||||| ||| Sbjct 4309685 ACACCTAGCCCCATGT-CTGCTGACCTCTGGTACAGCTGGCAGGACAGCTCACCGTTCAC 4309743 Query 25611 CACGTAAAACTGACACATGGTGTAGCACGGAGGAAGAGCTAT 25652 |||||| ||||| || | || | ||| || || || || || Sbjct 4309744 CACGTAGAACTGGCAGAGGGCATGGCATGGGGGCAGGGCCAT 4309785 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 339715724039637