Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myotis_20davidii_20[refseq_20GCF_5F000327345.1_202012-12-20] 101,769 sequences; 2,059,799,708 total letters Query= NC_005902.1 Length=186250 Score E Sequences producing significant alignments: (Bits) Value seq14314 172 7e-38 seq19657 86.0 7e-12 >seq14314 Length=2618943 Score = 172 bits (190), Expect = 7e-38 Identities = 478/720 (66%), Gaps = 21/720 (3%) Strand=Plus/Plus Query 164395 TGGAATTTTGAAGAAATGGGAGTAGGTGGACTAGATCGAGAATTTTCTCTTATTTTCAGA 164454 ||||| |||||| |||||||| |||| || | || ||||||||| |||||| || Sbjct 1809463 TGGAACTTTGAAAAAATGGGAATAGGAGGTGTGGACAAAGAATTTTCAGATATTTTTCGA 1809522 Query 164455 CGAGCATTTGCTTCTAGATCAGTTCCTATCGAAATAATaaaaaaaTTAGGCTGTAAACAT 164514 |||||||||||||| || ||||| || || | || | | || || |||||| Sbjct 1809523 CGAGCATTTGCTTCCCGAGTGTTTCCTCCAGAGATTGTGGAACACATGGGTTGCAAACAT 1809582 Query 164515 ATAAAAGGAATTTTATTACATGGACCTCCTGGTTGCGGTAAAACATTAATGGCTCGATGC 164574 | ||||| || | ||| |||| || || ||||| ||||| || | |||||||| Sbjct 1809583 GTTAAAGGTATCCTGTTATATGGGCCCCCAGGTTGTGGTAAGACTCTCTTGGCTCGACAG 1809642 Query 164575 ATTGCTCAAGCTTTTAAAT---CGCGACCCGTTAAAATTGTTAAT-GGTCCTGAATTATT 164630 |||| |||| | || ||| | || || ||| | || ||| |||| |||| || Sbjct 1809643 ATTG-GCAAGATGTTGAATGCCAGAGAGCC--CAAAGTGGTCAATGGGTCAAAAATTCTT 1809699 Query 164631 GAACAAATATGTAGGTGAGTCAGAAGCTAATGTTAGAAAGTTGTTTCAGGAGGCTGAAGA 164690 ||||||||||| || || ||||||||||| || | || | ||| || |||||||| Sbjct 1809700 -AACAAATATGTGGGAGAATCAGAAGCTAACATTCGTAAACTCTTTGCTGATGCTGAAGA 1809758 Query 164691 AGAACAAAAGAAAGCAGGT-TTAGCTAGTAAATTACATGTTATTGTTTTTGATGAGATAG 164749 || |||| || ||| || | ||| || || | || | |||||||| || | Sbjct 1809759 GGAGCAAAGGAGGCTTGGTGCTAAC-AGTGGTTTGCACATCATCATCTTTGATGAAATTG 1809817 Query 164750 ATGCTCTTTGCAAA----AAACGTGG-TGATA--ATATTA-TTCATGATGCAGTGGTTAA 164801 |||| ||| | | | ||| || || | | | | ||||| | || || || Sbjct 1809818 ATGC---AAGCAGAGAGGGAGCATGGCTGGTAGCACAGGAGTCCATGACACTGTCGTCAA 1809874 Query 164802 TCAGTTGCTTTCTAAAATAGATGGTGTAGAATCCTTAAATAATATTTTAATTGTAGGTAT 164861 || ||||| || ||||| || || |||||| | || || || ||| | | || || Sbjct 1809875 CCAATTGCTGTCCAAAATTGACGGGGTAGAACAGCTGAACAACATCTTAGTCATTGGAAT 1809934 Query 164862 GACCAACCGACCTGATTTAATTGATGATGCTTTATTACGACCTGGTCGATTAGAATTGAA 164921 |||||| |||| ||| | || ||||| ||| | | ||| |||| || | ||| | || Sbjct 1809935 GACCAATAGACCAGATCTGATAGATGAAGCTCTCCTTCGATCTGGAAGACTGGAAGTTAA 1809994 Query 164922 AATAGAAATAGGATTACCCGACAAAGAAGGACGCCTTCAAATTTTAAAAGTTCATGTGGC 164981 ||| ||||||| ||||| || || |||| || || ||||| | | | || || Sbjct 1809995 AATGAAAATAGGCTTACCAGATGAAAAAGGTCGACTACAAATCCTTCACATCCACACAGC 1810054 Query 164982 TAAAATGAAATCCTGTGATATATTATCTCCCGATGTAGATTTAAATAAAATAGCTGCCGA 165041 | |||| | | | || | ||| | || |||||| | || || | || | || Sbjct 1810055 AAGGATGAGAGGGCATCAGTTACTCTCTGCAGACGTAGATATTAAAGAACTGGCCACAGA 1810114 Query 165042 AACTAAAAATTATAGTGGTGCTGAATTAGAGGGATTAGTAAGAGCCGCTCAATCAACCGC 165101 || || |||| |||||||||||||| ||||| | || |||| || ||||| || || Sbjct 1810115 GACCAAGAATTTCAGTGGTGCTGAATTGGAGGGTCTGGTGTGAGCGGCACAATCCACTGC 1810174 Score = 91.5 bits (100), Expect = 2e-13 Identities = 145/205 (71%), Gaps = 6/205 (3%) Strand=Plus/Minus Query 164500 TTAGGCTGTAAACATATAAAAGGAATTTTATTACATGGACCTCCTGGTTGCGGTAAAACA 164559 ||||| || |||||| | ||||| || | ||| |||| || || ||||| |||||||| Sbjct 1530757 TTAGGTTGCAAACATGTTAAAGGCATCCTGTTATATGGGCCCCCAGGTTGTGGTAAAACT 1530698 Query 164560 TTAATGGCTCGATGCATTGCTCAAGCTTTTAAATC---GCGACCCGTTAAAATTGTTAAT 164616 | |||||||| |||| |||| | || ||| | || || ||| | || ||| Sbjct 1530697 CTCTTGGCTCGACAGATTGG-CAAGATGTTGAATGCAAGAGAGCCC--AAAGTGGTCAAT 1530641 Query 164617 GGTCCTGAATTATTGAACAAATATGTAGGTGAGTCAGAAGCTAATGTTAGAAAGTTGTTT 164676 || || ||| | | ||||||||||| || || ||||||||||| || | || | ||| Sbjct 1530640 GGGCCAGAAATTCTTAACAAATATGTGGGAGAATCAGAAGCTAACATTCGTAAACTCTTT 1530581 Query 164677 CAGGAGGCTGAAGAAGAACAAAAGA 164701 || |||||||| || |||| || Sbjct 1530580 GCTGATGCTGAAGAGGAGCAAAGGA 1530556 >seq19657 Length=201 Score = 86.0 bits (94), Expect = 7e-12 Identities = 142/202 (70%), Gaps = 6/202 (3%) Strand=Plus/Plus Query 164503 GGCTGTAAACATATAAAAGGAATTTTATTACATGGACCTCCTGGTTGCGGTAAAACATTA 164562 || || |||||| | ||||| || | ||| |||| || || ||||| |||||||| | Sbjct 1 GGTTGCAAACATGTTAAAGGCATCCTGTTATATGGGCCCCCAGGTTGTGGTAAAACTCTC 60 Query 164563 ATGGCTCGATGCATTGCTCAAGCTTTTAAATC---GCGACCCGTTAAAATTGTTAATGGT 164619 |||||||| |||| |||| | || ||| | || || ||| | || ||||| Sbjct 61 TTGGCTCGACAGATTGG-CAAGATGTTGAATGCAAGAGAGCCC--AAAGTGGTCAATGGG 117 Query 164620 CCTGAATTATTGAACAAATATGTAGGTGAGTCAGAAGCTAATGTTAGAAAGTTGTTTCAG 164679 || ||| | | ||||||||||| || || ||||||||||| || | || | ||| Sbjct 118 CCAGAAATTCTTAACAAATATGTGGGAGAATCAGAAGCTAACATTCGTAAACTCTTTGCT 177 Query 164680 GAGGCTGAAGAAGAACAAAAGA 164701 || |||||||| || |||| || Sbjct 178 GATGCTGAAGAGGAGCAAAGGA 199 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595113983780400