Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myotis_20davidii_20[refseq_20GCF_5F000327345.1_202012-12-20] 101,769 sequences; 2,059,799,708 total letters Query= NC_006150.1 Length=221454 Score E Sequences producing significant alignments: (Bits) Value seq15902 138 2e-27 seq17101 116 5e-21 >seq15902 Length=4918767 Score = 138 bits (152), Expect = 2e-27 Identities = 165/224 (74%), Gaps = 0/224 (0%) Strand=Plus/Minus Query 9634 GTCTGAAACAGTTGTTCGTCACTCCATTCTGGATGTTCTCGTTTCAGAACATCGCACACT 9693 ||||| |||| | || ||| |||||||||||| || | || || ||||| |||||| Sbjct 2303533 GTCTGGAACAACCGCTCATCATCCCATTCTGGATGCTCCTGCTTAAGCACATCACACACT 2303474 Query 9694 CTGTTGTGTTCCCTGAGCCAGATAGTAGCGTACATCATGAGACCAGGCACCAGGCCAAAA 9753 ||||| ||||| | ||||| || || || |||||||| ||||| |||||||| ||||| Sbjct 2303473 CTGTTATGTTCGCGCAGCCAAATCGTGGCATACATCATCAGACCGGGCACCAGACCAAAC 2303414 Query 9754 GCCTCTTGACCGACAGCCAGACGCATATTTTCGGGCACTTCGGGAGGATAGATCATGTGC 9813 |||| || || || || | |||| | ||| || || | || || |||||||| | Sbjct 2303413 ACCTCCTGGCCCACGGCAAACCGCAGGTGTTCAGGGACATGAGGTGGGTAGATCATCTCA 2303354 Query 9814 ACCTGGACATCTTTGACCGAGGGGGGATACATTTCACCGTCAAT 9857 ||||| ||||||||| | ||| ||||| | || || ||||| Sbjct 2303353 GCCTGGGTATCTTTGACTGTGGGAGGATATACCTCTCCATCAAT 2303310 Score = 125 bits (138), Expect = 1e-23 Identities = 105/129 (81%), Gaps = 0/129 (0%) Strand=Plus/Minus Query 10028 TCTTACCCCATGTCCCAGTCCTTTAGTGAAGGCCGGGCCTCGCGCCAAATCAGTCCTAAA 10087 |||||||||||| ||||||||||||||||| || || |||||| ||| ||| | || Sbjct 2302448 TCTTACCCCATGACCCAGTCCTTTAGTGAAAGCTGGTCCTCGCTTATGATCTGTCTTGAA 2302389 Query 10088 AAACTGGTGCGTGAAATGTTGGCCAAAAAAGGCAAACATTAAGTTGGTGCCCTGGGGATC 10147 |||||| || ||||| || ||| |||| || |||||||| || || |||||||||||||| Sbjct 2302388 AAACTGATGGGTGAAGTGCTGGGCAAAGAATGCAAACATCAAATTTGTGCCCTGGGGATC 2302329 Query 10148 GGGAGTGAA 10156 ||| |||| Sbjct 2302328 AGGAATGAA 2302320 Score = 105 bits (116), Expect = 9e-18 Identities = 115/153 (75%), Gaps = 0/153 (0%) Strand=Plus/Minus Query 10287 TCACCTTTGACCCCAAGAGGAGTTGGACAATCGTGAGGAACCGGAGGTAGAATCCTTGCG 10346 |||||||| || || | ||||| || || || | || || ||||| ||| ||| | Sbjct 2301854 TCACCTTTCACACCCATGGGAGTCGGGCAGTCATCAGCCACAGGAGGAAGAGCCCTGGTA 2301795 Query 10347 TAATAGGAGAGATTGGAGAAAGCTTCCCAGCTTGGGTATTCGTAGTCCGCGTTGTAGATG 10406 |||||||||||||| || || |||||||||||| || |||||| || || || | Sbjct 2301794 TAATAGGAGAGATTCGAAAAGGCTTCCCAGCTTTTATAGCCGTAGTGTGCATTATACGTT 2301735 Query 10407 GGAGGGCTGTCAATCAAATCGGATCTACCTGAA 10439 || ||||||||||||||||| ||||| ||||| Sbjct 2301734 GGTGGGCTGTCAATCAAATCTGATCTGGCTGAA 2301702 Score = 89.7 bits (98), Expect = 7e-13 Identities = 182/265 (69%), Gaps = 4/265 (2%) Strand=Plus/Minus Query 9322 CTTACTCGGCCAGCTATTTGTTTCGTGAACGATTCTACTAGCTGGGTAATGCCGTGGGTC 9381 ||||| | |||||| |||| || |||| ||||| || | |||||||| || ||| | Sbjct 2304140 CTTACCCTGCCAGCATTTTGCTTGCTGAATGATTCAACAAACTGGGTAAGCCCATGGTCC 2304081 Query 9382 ATGAGTATGGAATTGTTGTAAACGAAGTTAATG-TAGTCATACTTTGTTTTATCAATCTC 9440 || | || ||||||||||| | ||| || || ||| |||| | |||||| | Sbjct 2304080 ATTAATAAAGAATTGTTGTAGA-GAAATTGTTGATAGCTGTACTCCTGGTCATCAATGTG 2304022 Query 9441 AAACGCATCCGGCATGAGAGAATGCCAGTGATACAACATGTTAAACTCGGAAAATATACG 9500 ||| | || |||| || | ||||||||| || | |||||||||| | | || || Sbjct 2304021 AAAGGAGTCGGGCAGAAGGGGATGCCAGTGGTAGAGAGTGTTAAACTCAGCAGCGATGCG 2303962 Query 9501 ATTTTGGTACTGGAA-CGAAGTACCAAAGAGCAGTTCGGGCTTAAACAGCAACTGAAAGT 9559 |||||||||||||| | | ||| ||||| || || | |||| || | |||| Sbjct 2303961 GTTTTGGTACTGGAATTGTTGGTTGAAA-AGCAGCTCTGGGTCAAACTTCAGTTTGAAGT 2303903 Query 9560 GGTAGCCGCTGAGCTGCTGAACATA 9584 | ||||| || | || || ||||| Sbjct 2303902 GATAGCCACTCAAGTGTTGTACATA 2303878 >seq17101 Length=2795874 Score = 116 bits (128), Expect = 5e-21 Identities = 159/222 (72%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 8753 AACCCCACGTCTCCGCCGAAGGTGCTGGGTTTCCAGTAACCCGGGGAGCAGATGACGTTC 8812 || |||| || || || || ||||| | |||||||| | || || |||||| | ||| Sbjct 2743160 AAGCCCATCTCACCACCAAATGTGCTTGACTTCCAGTACTCAGGAGAACAGATGGCATTC 2743101 Query 8813 GCCATGAGGCCTTTGAGGGAAAACGGAGCCCCCAGCTCGAGAATGCTCTCACCGAAGATG 8872 | | |||||| ||||||||||| |||||||| | || | || ||||| || |||||| Sbjct 2743100 CCTAAGAGGCCCTTGAGGGAAAAGGGAGCCCCAATTTCTATCATACTCTCCCCAAAGATG 2743041 Query 8873 GCGTTGGGACGGGGCTTTTCCACCAAGAATCCGGTGTACAACTCCACAGCCTCGATGTCT 8932 | ||| ||| || ||| || | | | ||| | ||| ||||||| || || |||||| Sbjct 2743040 GAGTTTGGATGGCACTTCTCAAGAAGCAGTCCCGGGTAGAACTCCAAGGCATCAATGTCT 2742981 Query 8933 CCGTAAAGGGCCCTGAGTTCGGCAGCGATTTCCTTTTCTCCT 8974 || || || || | ||| || || || ||||| |||||| Sbjct 2742980 CCATAGAGCTCCTCCAATTCAGCTGCCATCTCCTTCTCTCCT 2742939 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 707623476745360